Protein–RNA interactions for Protein: A6NHT5

HMX3, Homeobox protein HMX3, humanhuman

Predictions only

Length 357 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMX3A6NHT5 AP2S1-203ENST00000593442 636 ntTSL 2 BASIC16.69■□□□□ 0.26
HMX3A6NHT5 AL354811.1-201ENST00000610286 706 ntBASIC16.69■□□□□ 0.26
HMX3A6NHT5 POLR2E-214ENST00000619917 932 ntTSL 5 BASIC16.69■□□□□ 0.26
HMX3A6NHT5 NME4-211ENST00000620944 1193 ntTSL 2 BASIC16.69■□□□□ 0.26
HMX3A6NHT5 TRIM47-201ENST00000254816 2266 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
HMX3A6NHT5 NLE1-201ENST00000360831 1726 ntTSL 5 BASIC16.69■□□□□ 0.26
HMX3A6NHT5 EARS2-206ENST00000563232 1709 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
HMX3A6NHT5 WWP1-202ENST00000517970 4686 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
HMX3A6NHT5 MLXIP-201ENST00000319080 8427 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
HMX3A6NHT5 KLHL24-201ENST00000242810 2345 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
HMX3A6NHT5 CCDC184-201ENST00000316554 2343 ntAPPRIS P1 BASIC16.69■□□□□ 0.26
HMX3A6NHT5 IL4I1-202ENST00000391826 1863 ntAPPRIS ALT2 TSL 1 (best) BASIC16.69■□□□□ 0.26
HMX3A6NHT5 ECHDC2-221ENST00000536120 1446 ntTSL 3 BASIC16.69■□□□□ 0.26
HMX3A6NHT5 RAB11FIP2-202ENST00000369199 6119 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
HMX3A6NHT5 CARD9-201ENST00000371732 2123 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
HMX3A6NHT5 TMEM110-201ENST00000355083 4769 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
HMX3A6NHT5 RAB8A-201ENST00000300935 2827 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
HMX3A6NHT5 ZFAND6-224ENST00000618205 1659 ntAPPRIS P1 TSL 5 BASIC16.69■□□□□ 0.26
HMX3A6NHT5 ZNF853-201ENST00000457543 3857 ntAPPRIS P1 TSL 3 BASIC16.69■□□□□ 0.26
HMX3A6NHT5 TMEM51-201ENST00000376008 1931 ntAPPRIS P1 TSL 2 BASIC16.68■□□□□ 0.26
HMX3A6NHT5 BTD-202ENST00000383778 2261 ntAPPRIS ALT2 TSL 2 BASIC16.68■□□□□ 0.26
HMX3A6NHT5 LAG3-202ENST00000441671 1576 ntAPPRIS ALT2 TSL 1 (best) BASIC16.68■□□□□ 0.26
HMX3A6NHT5 CYP2E1-205ENST00000463117 1912 ntAPPRIS P1 TSL 5 BASIC16.68■□□□□ 0.26
HMX3A6NHT5 PCK2-205ENST00000558096 2433 ntTSL 2 BASIC16.68■□□□□ 0.26
HMX3A6NHT5 SLC9A6-208ENST00000636206 4711 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
HMX3A6NHT5 AC011270.2-201ENST00000624293 2550 ntBASIC16.68■□□□□ 0.26
HMX3A6NHT5 CD40-201ENST00000372276 1623 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
HMX3A6NHT5 TMEM243-201ENST00000257637 1063 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
HMX3A6NHT5 DCTN3-202ENST00000341694 899 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
HMX3A6NHT5 DCTN3-205ENST00000378916 773 ntTSL 2 BASIC16.68■□□□□ 0.26
HMX3A6NHT5 MIR638-201ENST00000385237 100 ntBASIC16.68■□□□□ 0.26
HMX3A6NHT5 FAM66D-201ENST00000434078 918 ntTSL 5 BASIC16.68■□□□□ 0.26
HMX3A6NHT5 AC010999.2-201ENST00000621974 596 ntTSL 2 BASIC16.68■□□□□ 0.26
HMX3A6NHT5 CDK16-223ENST00000622098 2968 ntTSL 2 BASIC16.68■□□□□ 0.26
HMX3A6NHT5 FBXL15-201ENST00000224862 2362 ntAPPRIS P2 TSL 1 (best) BASIC16.68■□□□□ 0.26
HMX3A6NHT5 SCRN2-201ENST00000290216 1548 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
HMX3A6NHT5 RASL12-202ENST00000421977 1523 ntTSL 2 BASIC16.68■□□□□ 0.26
HMX3A6NHT5 TSC22D3-203ENST00000372383 2266 ntTSL 2 BASIC16.68■□□□□ 0.26
HMX3A6NHT5 BHLHE41-201ENST00000242728 3837 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
HMX3A6NHT5 AEBP1-206ENST00000450684 2571 ntTSL 2 BASIC16.68■□□□□ 0.26
HMX3A6NHT5 CBSL-202ENST00000617706 2563 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
HMX3A6NHT5 CHTOP-204ENST00000368694 2096 ntAPPRIS P3 TSL 1 (best) BASIC16.68■□□□□ 0.26
HMX3A6NHT5 SBF2-AS1-201ENST00000498905 2709 ntTSL 5 BASIC16.68■□□□□ 0.26
HMX3A6NHT5 ZCWPW1-202ENST00000398027 2356 ntAPPRIS P3 TSL 1 (best) BASIC16.67■□□□□ 0.26
HMX3A6NHT5 NRG2-205ENST00000361474 3020 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
HMX3A6NHT5 YARS2-201ENST00000324868 2122 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
HMX3A6NHT5 LINC00896-202ENST00000609602 2128 ntBASIC16.67■□□□□ 0.26
HMX3A6NHT5 ATXN2-227ENST00000616825 4575 ntAPPRIS ALT2 TSL 5 BASIC16.67■□□□□ 0.26
HMX3A6NHT5 KMT2E-207ENST00000476671 2523 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
HMX3A6NHT5 HGFAC-204ENST00000511533 2016 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
HMX3A6NHT5 E2F2-201ENST00000361729 5191 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
HMX3A6NHT5 PPP3CA-203ENST00000394854 4685 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
HMX3A6NHT5 SLC39A7-201ENST00000374675 2153 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
HMX3A6NHT5 ADCY9-201ENST00000294016 7725 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
HMX3A6NHT5 INPP4A-205ENST00000409851 3365 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
HMX3A6NHT5 HMGXB3-201ENST00000502717 4974 ntAPPRIS P2 TSL 1 (best) BASIC16.67■□□□□ 0.26
HMX3A6NHT5 NOP9-202ENST00000396802 1942 ntTSL 5 BASIC16.67■□□□□ 0.26
HMX3A6NHT5 NOMO2-202ENST00000381474 3911 ntAPPRIS ALT2 TSL 5 BASIC16.67■□□□□ 0.26
HMX3A6NHT5 CDKN2D-201ENST00000335766 1086 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
HMX3A6NHT5 STOML2-201ENST00000356493 1278 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
HMX3A6NHT5 MTURN-203ENST00000409688 843 ntTSL 2 BASIC16.67■□□□□ 0.26
HMX3A6NHT5 LINC01167-201ENST00000423232 604 ntTSL 3 BASIC16.67■□□□□ 0.26
HMX3A6NHT5 PRKCQ-AS1-202ENST00000445427 1133 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
HMX3A6NHT5 AL355877.1-204ENST00000451482 1078 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
HMX3A6NHT5 MRM1-203ENST00000612760 1284 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
HMX3A6NHT5 PPRC1-201ENST00000278070 5330 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
HMX3A6NHT5 ACADVL-205ENST00000543245 2227 ntTSL 2 BASIC16.67■□□□□ 0.26
HMX3A6NHT5 GHDC-212ENST00000593209 1827 ntTSL 5 BASIC16.67■□□□□ 0.26
HMX3A6NHT5 ZNF821-221ENST00000611294 1833 ntTSL 3 BASIC16.67■□□□□ 0.26
HMX3A6NHT5 PTGDR-201ENST00000306051 2942 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
HMX3A6NHT5 PFKFB3-217ENST00000626882 1965 ntTSL 5 BASIC16.67■□□□□ 0.26
HMX3A6NHT5 CRHR2-207ENST00000471646 2530 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
HMX3A6NHT5 SETD6-201ENST00000219315 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC16.67■□□□□ 0.26
HMX3A6NHT5 THOC3-201ENST00000265097 1589 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
HMX3A6NHT5 HDAC10-201ENST00000216271 2687 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
HMX3A6NHT5 SWAP70-202ENST00000447399 3538 ntTSL 2 BASIC16.67■□□□□ 0.26
HMX3A6NHT5 ARL5A-201ENST00000295087 5326 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
HMX3A6NHT5 CDK11A-203ENST00000357760 2446 ntAPPRIS ALT1 TSL 1 (best) BASIC16.67■□□□□ 0.26
HMX3A6NHT5 CDK11A-204ENST00000358779 2419 ntAPPRIS ALT1 TSL 1 (best) BASIC16.67■□□□□ 0.26
HMX3A6NHT5 CDK11A-206ENST00000378638 2429 ntTSL 5 BASIC16.67■□□□□ 0.26
HMX3A6NHT5 CDK11A-208ENST00000404249 2449 ntAPPRIS P4 TSL 1 (best) BASIC16.67■□□□□ 0.26
HMX3A6NHT5 NOTCH3-201ENST00000263388 8666 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
HMX3A6NHT5 CD248-201ENST00000311330 2558 ntAPPRIS P1 BASIC16.67■□□□□ 0.26
HMX3A6NHT5 WIPF1-206ENST00000409891 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC16.67■□□□□ 0.26
HMX3A6NHT5 NRBP1-204ENST00000379863 2174 ntTSL 5 BASIC16.67■□□□□ 0.26
HMX3A6NHT5 SNAP91-201ENST00000195649 4434 ntAPPRIS ALT2 TSL 5 BASIC16.67■□□□□ 0.26
HMX3A6NHT5 SNAP91-204ENST00000369694 4449 ntAPPRIS P2 TSL 5 BASIC16.67■□□□□ 0.26
HMX3A6NHT5 TP53I3-202ENST00000335934 1635 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
HMX3A6NHT5 MAEA-213ENST00000510794 1607 ntTSL 2 BASIC16.67■□□□□ 0.26
HMX3A6NHT5 PGM5-202ENST00000396396 3338 ntAPPRIS P1 TSL 2 BASIC16.67■□□□□ 0.26
HMX3A6NHT5 KLHL22-201ENST00000328879 2616 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
HMX3A6NHT5 VAV1-204ENST00000596764 2775 ntTSL 2 BASIC16.66■□□□□ 0.26
HMX3A6NHT5 PIGQ-204ENST00000409527 1915 ntAPPRIS P1 TSL 2 BASIC16.66■□□□□ 0.26
HMX3A6NHT5 JADE3-204ENST00000614628 4934 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
HMX3A6NHT5 CLIC6-201ENST00000349499 3806 ntAPPRIS P3 TSL 1 (best) BASIC16.66■□□□□ 0.26
HMX3A6NHT5 NCOA6-207ENST00000616167 3271 ntAPPRIS ALT2 TSL 5 BASIC16.66■□□□□ 0.26
HMX3A6NHT5 SLC47A1-202ENST00000395585 1998 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
HMX3A6NHT5 XXYLT1-201ENST00000310380 2727 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
HMX3A6NHT5 IRS3P-201ENST00000223076 1006 ntBASIC16.66■□□□□ 0.26
HMX3A6NHT5 PRR18-201ENST00000322583 3084 ntAPPRIS P2 BASIC16.66■□□□□ 0.26
Retrieved 100 of 98,524 protein–RNA pairs in 23.2 ms