Protein–RNA interactions for Protein: A2PYH4

HFM1, Probable ATP-dependent DNA helicase HFM1, humanhuman

Predictions only

Length 1,435 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HFM1A2PYH4 CCNC-207ENST00000518714 1426 ntTSL 5 BASIC28.57■■■□□ 2.16
HFM1A2PYH4 ANKRD13D-202ENST00000447274 2881 ntTSL 1 (best) BASIC28.57■■■□□ 2.16
HFM1A2PYH4 COMMD1-201ENST00000311832 911 ntAPPRIS P1 TSL 1 (best) BASIC28.57■■■□□ 2.16
HFM1A2PYH4 AC093620.1-201ENST00000342963 583 ntTSL 3 BASIC28.57■■■□□ 2.16
HFM1A2PYH4 AC012618.3-203ENST00000426044 917 ntTSL 2 BASIC28.57■■■□□ 2.16
HFM1A2PYH4 ST20-202ENST00000485386 529 ntAPPRIS P1 TSL 1 (best) BASIC28.57■■■□□ 2.16
HFM1A2PYH4 LY6L-201ENST00000562505 988 ntAPPRIS P1 TSL 5 BASIC28.57■■■□□ 2.16
HFM1A2PYH4 SMARCD2-212ENST00000613943 2342 ntTSL 5 BASIC28.57■■■□□ 2.16
HFM1A2PYH4 AVL9-209ENST00000640103 1367 ntTSL 5 BASIC28.57■■■□□ 2.16
HFM1A2PYH4 KRAS-203ENST00000556131 1696 ntTSL 1 (best) BASIC28.56■■■□□ 2.16
HFM1A2PYH4 EARS2-210ENST00000564501 2027 ntTSL 5 BASIC28.56■■■□□ 2.16
HFM1A2PYH4 MUTYH-203ENST00000372098 1839 ntTSL 1 (best) BASIC28.56■■■□□ 2.16
HFM1A2PYH4 MUTYH-204ENST00000372104 1823 ntAPPRIS ALT2 TSL 1 (best) BASIC28.56■■■□□ 2.16
HFM1A2PYH4 MUTYH-205ENST00000372110 1809 ntTSL 1 (best) BASIC28.56■■■□□ 2.16
HFM1A2PYH4 MLLT10-205ENST00000377100 1136 ntTSL 2 BASIC28.56■■■□□ 2.16
HFM1A2PYH4 AL445685.1-201ENST00000425802 762 ntTSL 3 BASIC28.56■■■□□ 2.16
HFM1A2PYH4 CCR12P-201ENST00000446203 998 ntBASIC28.56■■■□□ 2.16
HFM1A2PYH4 IGHMBP2-205ENST00000539224 785 ntTSL 3 BASIC28.56■■■□□ 2.16
HFM1A2PYH4 AL929554.1-201ENST00000568665 460 ntAPPRIS P1 TSL 3 BASIC28.56■■■□□ 2.16
HFM1A2PYH4 FBXL16-203ENST00000562563 2257 ntTSL 2 BASIC28.56■■■□□ 2.16
HFM1A2PYH4 PCDHA13-203ENST00000617769 2427 ntAPPRIS ALT2 BASIC28.56■■■□□ 2.16
HFM1A2PYH4 ISOC2-203ENST00000438389 1566 ntTSL 2 BASIC28.55■■■□□ 2.16
HFM1A2PYH4 SPRYD7-204ENST00000613924 2285 ntTSL 1 (best) BASIC28.55■■■□□ 2.16
HFM1A2PYH4 NBL1-209ENST00000548815 1953 ntAPPRIS P3 TSL 3 BASIC28.55■■■□□ 2.16
HFM1A2PYH4 PIN1-201ENST00000247970 997 ntAPPRIS P1 TSL 1 (best) BASIC28.55■■■□□ 2.16
HFM1A2PYH4 AC005521.1-201ENST00000393351 872 ntBASIC28.55■■■□□ 2.16
HFM1A2PYH4 AC134772.1-201ENST00000438872 885 ntTSL 3 BASIC28.55■■■□□ 2.16
HFM1A2PYH4 MAP3K14-AS1-202ENST00000585351 893 ntTSL 1 (best) BASIC28.55■■■□□ 2.16
HFM1A2PYH4 TYROBP-209ENST00000589517 415 ntAPPRIS ALT1 TSL 1 (best) BASIC28.55■■■□□ 2.16
HFM1A2PYH4 L34079.3-201ENST00000600242 546 ntTSL 4 BASIC28.55■■■□□ 2.16
HFM1A2PYH4 AC005363.2-201ENST00000618631 242 ntBASIC28.55■■■□□ 2.16
HFM1A2PYH4 AC092865.7-201ENST00000641832 219 ntBASIC28.55■■■□□ 2.16
HFM1A2PYH4 BLACE-201ENST00000378120 2456 ntAPPRIS P1 TSL 1 (best) BASIC28.55■■■□□ 2.16
HFM1A2PYH4 HNRNPA3-204ENST00000435711 1731 ntAPPRIS P3 TSL 1 (best) BASIC28.55■■■□□ 2.16
HFM1A2PYH4 FFAR3-201ENST00000327809 1796 ntAPPRIS P1 TSL 1 (best) BASIC28.55■■■□□ 2.16
HFM1A2PYH4 SELENOF-207ENST00000611507 1785 ntTSL 5 BASIC28.55■■■□□ 2.16
HFM1A2PYH4 QPCTL-202ENST00000366382 1814 ntTSL 2 BASIC28.55■■■□□ 2.16
HFM1A2PYH4 LINC01011-201ENST00000445000 2811 ntTSL 2 BASIC28.55■■■□□ 2.16
HFM1A2PYH4 AC005906.2-203ENST00000640962 2091 ntTSL 5 BASIC28.54■■■□□ 2.16
HFM1A2PYH4 CFAP77-203ENST00000393216 1638 ntAPPRIS ALT2 TSL 1 (best) BASIC28.54■■■□□ 2.16
HFM1A2PYH4 AKIRIN2-201ENST00000257787 1662 ntAPPRIS P1 TSL 1 (best) BASIC28.54■■■□□ 2.16
HFM1A2PYH4 RRS1-201ENST00000320270 1706 ntAPPRIS P1 BASIC28.54■■■□□ 2.16
HFM1A2PYH4 MAP3K5-201ENST00000359015 5197 ntAPPRIS P1 TSL 1 (best) BASIC28.54■■■□□ 2.16
HFM1A2PYH4 AL353719.1-201ENST00000566847 864 ntBASIC28.54■■■□□ 2.16
HFM1A2PYH4 AL158151.3-201ENST00000599172 696 ntTSL 5 BASIC28.54■■■□□ 2.16
HFM1A2PYH4 AC116562.4-202ENST00000641738 218 ntBASIC28.54■■■□□ 2.16
HFM1A2PYH4 PALM-202ENST00000338448 2725 ntAPPRIS P4 TSL 1 (best) BASIC28.54■■■□□ 2.16
HFM1A2PYH4 TBC1D3P2-202ENST00000577902 1649 ntBASIC28.54■■■□□ 2.16
HFM1A2PYH4 RBM6-204ENST00000422955 2324 ntTSL 2 BASIC28.54■■■□□ 2.16
HFM1A2PYH4 CDO1-201ENST00000250535 1860 ntAPPRIS P1 TSL 1 (best) BASIC28.53■■■□□ 2.16
HFM1A2PYH4 HGFAC-204ENST00000511533 2016 ntTSL 1 (best) BASIC28.53■■■□□ 2.16
HFM1A2PYH4 ACD-201ENST00000219251 2052 ntAPPRIS P3 TSL 2 BASIC28.53■■■□□ 2.16
HFM1A2PYH4 CCDC62-204ENST00000392441 2936 ntAPPRIS ALT2 TSL 5 BASIC28.53■■■□□ 2.16
HFM1A2PYH4 PRDX5-201ENST00000265462 893 ntAPPRIS P1 TSL 1 (best) BASIC28.53■■■□□ 2.16
HFM1A2PYH4 GPR3-201ENST00000374024 2115 ntAPPRIS P1 TSL 1 (best) BASIC28.53■■■□□ 2.16
HFM1A2PYH4 AC128688.1-201ENST00000487626 519 ntBASIC28.53■■■□□ 2.16
HFM1A2PYH4 PSMD9-208ENST00000542602 516 ntTSL 3 BASIC28.53■■■□□ 2.16
HFM1A2PYH4 ST20-MTHFS-203ENST00000615374 679 ntAPPRIS P1 TSL 3 BASIC28.53■■■□□ 2.16
HFM1A2PYH4 SMN1-211ENST00000625245 885 ntAPPRIS ALT2 TSL 5 BASIC28.53■■■□□ 2.16
HFM1A2PYH4 SMN2-215ENST00000628696 885 ntAPPRIS ALT2 TSL 5 BASIC28.53■■■□□ 2.16
HFM1A2PYH4 HAUS4-217ENST00000555367 1454 ntTSL 5 BASIC28.53■■■□□ 2.16
HFM1A2PYH4 AC116565.2-201ENST00000637674 1854 ntTSL 2 BASIC28.53■■■□□ 2.16
HFM1A2PYH4 CD70-201ENST00000245903 913 ntAPPRIS P1 TSL 1 (best) BASIC28.52■■■□□ 2.16
HFM1A2PYH4 BEX3-204ENST00000372645 913 ntAPPRIS P1 TSL 1 (best) BASIC28.52■■■□□ 2.16
HFM1A2PYH4 HMGA1P5-201ENST00000412453 271 ntBASIC28.52■■■□□ 2.16
HFM1A2PYH4 KRT18P57-201ENST00000443599 1254 ntBASIC28.52■■■□□ 2.16
HFM1A2PYH4 OOEP-AS1-201ENST00000445350 463 ntTSL 3 BASIC28.52■■■□□ 2.16
HFM1A2PYH4 MIR4674-201ENST00000582457 87 ntBASIC28.52■■■□□ 2.16
HFM1A2PYH4 CLN6-221ENST00000637494 765 ntTSL 5 BASIC28.52■■■□□ 2.16
HFM1A2PYH4 BTNL9-210ENST00000515271 1444 ntTSL 2 BASIC28.52■■■□□ 2.16
HFM1A2PYH4 UCHL5-202ENST00000367449 1507 ntAPPRIS ALT1 TSL 1 (best) BASIC28.52■■■□□ 2.16
HFM1A2PYH4 LINC01586-201ENST00000506090 1840 ntTSL 2 BASIC28.52■■■□□ 2.16
HFM1A2PYH4 ELMOD1-206ENST00000531234 1832 ntTSL 2 BASIC28.52■■■□□ 2.16
HFM1A2PYH4 GPR31-201ENST00000366834 2059 ntAPPRIS P1 BASIC28.52■■■□□ 2.16
HFM1A2PYH4 PIGQ-209ENST00000470411 2112 ntTSL 1 (best) BASIC28.52■■■□□ 2.16
HFM1A2PYH4 EIF2B1-201ENST00000424014 2477 ntAPPRIS P1 TSL 1 (best) BASIC28.52■■■□□ 2.16
HFM1A2PYH4 NECAB3-202ENST00000375238 1942 ntAPPRIS P1 TSL 1 (best) BASIC28.52■■■□□ 2.16
HFM1A2PYH4 MBD1-216ENST00000587605 1945 ntTSL 2 BASIC28.52■■■□□ 2.16
HFM1A2PYH4 PCID2-202ENST00000337344 1898 ntAPPRIS P1 TSL 2 BASIC28.52■■■□□ 2.16
HFM1A2PYH4 EXOC3L2-201ENST00000252482 1230 ntTSL 1 (best) BASIC28.52■■■□□ 2.16
HFM1A2PYH4 TMEM234-201ENST00000309777 1082 ntAPPRIS P1 TSL 1 (best) BASIC28.52■■■□□ 2.16
HFM1A2PYH4 H2AFB2-201ENST00000354514 348 ntAPPRIS P1 BASIC28.52■■■□□ 2.16
HFM1A2PYH4 TIMM17B-201ENST00000376582 950 ntAPPRIS P1 TSL 1 (best) BASIC28.52■■■□□ 2.16
HFM1A2PYH4 SELENOF-203ENST00000401030 727 ntTSL 2 BASIC28.52■■■□□ 2.16
HFM1A2PYH4 SLC25A48-202ENST00000412661 1148 ntTSL 1 (best) BASIC28.52■■■□□ 2.16
HFM1A2PYH4 SLC25A48-204ENST00000433282 1111 ntAPPRIS P1 TSL 5 BASIC28.52■■■□□ 2.16
HFM1A2PYH4 TSPY17P-201ENST00000450329 467 ntBASIC28.52■■■□□ 2.16
HFM1A2PYH4 AL109797.1-201ENST00000452501 835 ntTSL 2 BASIC28.52■■■□□ 2.16
HFM1A2PYH4 NDUFS3-213ENST00000534716 1263 ntTSL 2 BASIC28.52■■■□□ 2.16
HFM1A2PYH4 KCTD10-211ENST00000540411 866 ntTSL 1 (best) BASIC28.52■■■□□ 2.16
HFM1A2PYH4 AC215522.2-202ENST00000633163 1143 ntTSL 5 BASIC28.52■■■□□ 2.16
HFM1A2PYH4 EBF4-202ENST00000380648 2910 ntAPPRIS P2 TSL 5 BASIC28.51■■■□□ 2.16
HFM1A2PYH4 ARHGAP11A-205ENST00000563864 2279 ntTSL 5 BASIC28.51■■■□□ 2.15
HFM1A2PYH4 SLC25A3-201ENST00000188376 1909 ntAPPRIS ALT1 TSL 1 (best) BASIC28.51■■■□□ 2.15
HFM1A2PYH4 CDH5-204ENST00000563425 1932 ntTSL 5 BASIC28.51■■■□□ 2.15
HFM1A2PYH4 TH-203ENST00000352909 1889 ntAPPRIS P1 TSL 1 (best) BASIC28.51■■■□□ 2.15
HFM1A2PYH4 ZNF843-203ENST00000618063 1765 ntAPPRIS P2 TSL 1 (best) BASIC28.51■■■□□ 2.15
HFM1A2PYH4 RCN1-201ENST00000054950 2572 ntAPPRIS P2 TSL 1 (best) BASIC28.51■■■□□ 2.15
HFM1A2PYH4 KCTD13-207ENST00000568000 2528 ntAPPRIS P1 TSL 1 (best) BASIC28.51■■■□□ 2.15
HFM1A2PYH4 BAD-201ENST00000309032 929 ntAPPRIS P1 TSL 1 (best) BASIC28.51■■■□□ 2.15
Retrieved 100 of 98,524 protein–RNA pairs in 18.2 ms