Protein–RNA interactions for Protein: A0A0B4J276

TRAV25, T-cell receptor alpha variable 25 (Fragment), humanhuman

Predictions only

Length 109 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV25A0A0B4J276 PAX1-201ENST00000398485 2838 ntAPPRIS P3 TSL 5 BASIC14.51□□□□□ -0.09
TRAV25A0A0B4J276 TMEM250-205ENST00000561457 2804 ntAPPRIS P1 TSL 2 BASIC14.51□□□□□ -0.09
TRAV25A0A0B4J276 TCTEX1D2-201ENST00000325318 673 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
TRAV25A0A0B4J276 PLPP7-201ENST00000372261 972 ntTSL 2 BASIC14.51□□□□□ -0.09
TRAV25A0A0B4J276 HDAC11-203ENST00000402271 1018 ntTSL 3 BASIC14.51□□□□□ -0.09
TRAV25A0A0B4J276 AC004080.6-201ENST00000467897 919 ntTSL 5 BASIC14.51□□□□□ -0.09
TRAV25A0A0B4J276 AP003071.4-201ENST00000562276 1284 ntBASIC14.51□□□□□ -0.09
TRAV25A0A0B4J276 IMPA2-208ENST00000589238 923 ntTSL 3 BASIC14.51□□□□□ -0.09
TRAV25A0A0B4J276 GRAMD4P8-201ENST00000605465 1115 ntBASIC14.51□□□□□ -0.09
TRAV25A0A0B4J276 HHIPL1-201ENST00000330710 7390 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
TRAV25A0A0B4J276 CAPN12-201ENST00000328867 2762 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
TRAV25A0A0B4J276 GRK4-203ENST00000398052 2202 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
TRAV25A0A0B4J276 RPS6KB2-201ENST00000312629 1733 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
TRAV25A0A0B4J276 ABHD14A-ACY1-202ENST00000463937 1705 ntAPPRIS ALT2 TSL 5 BASIC14.51□□□□□ -0.09
TRAV25A0A0B4J276 DHRS3-204ENST00000616661 1722 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
TRAV25A0A0B4J276 TMEM129-201ENST00000303277 2678 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
TRAV25A0A0B4J276 NOM1-201ENST00000275820 6077 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
TRAV25A0A0B4J276 GLB1-201ENST00000307363 2616 ntAPPRIS P4 TSL 1 (best) BASIC14.51□□□□□ -0.09
TRAV25A0A0B4J276 GDF7-201ENST00000272224 9749 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
TRAV25A0A0B4J276 MTSS1L-201ENST00000338779 4992 ntAPPRIS P2 TSL 1 (best) BASIC14.51□□□□□ -0.09
TRAV25A0A0B4J276 PEX16-210ENST00000532681 1639 ntTSL 3 BASIC14.51□□□□□ -0.09
TRAV25A0A0B4J276 B4GALT2-201ENST00000309519 2004 ntTSL 2 BASIC14.51□□□□□ -0.09
TRAV25A0A0B4J276 ASMTL-206ENST00000534940 2048 ntTSL 2 BASIC14.51□□□□□ -0.09
TRAV25A0A0B4J276 AKT1-211ENST00000554848 1595 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
TRAV25A0A0B4J276 ME2-218ENST00000640965 2476 ntTSL 5 BASIC14.51□□□□□ -0.09
TRAV25A0A0B4J276 ISCA1-203ENST00000375991 1958 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
TRAV25A0A0B4J276 PLSCR3-212ENST00000576201 1965 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
TRAV25A0A0B4J276 TUBA8-201ENST00000316027 1518 ntTSL 2 BASIC14.51□□□□□ -0.09
TRAV25A0A0B4J276 SLC22A18-202ENST00000347936 1542 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
TRAV25A0A0B4J276 YTHDF3-213ENST00000621820 2363 ntTSL 2 BASIC14.51□□□□□ -0.09
TRAV25A0A0B4J276 MAFG-AS1-201ENST00000582106 1895 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
TRAV25A0A0B4J276 TRIP13-201ENST00000166345 2672 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
TRAV25A0A0B4J276 ZIM2-206ENST00000599935 2226 ntAPPRIS P1 TSL 5 BASIC14.5□□□□□ -0.09
TRAV25A0A0B4J276 PRSS50-202ENST00000315170 1372 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
TRAV25A0A0B4J276 UBXN2A-201ENST00000309033 6066 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
TRAV25A0A0B4J276 PAQR9-201ENST00000340634 2452 ntAPPRIS P1 BASIC14.5□□□□□ -0.09
TRAV25A0A0B4J276 HOXD12-202ENST00000406506 1318 ntAPPRIS P1 TSL 3 BASIC14.5□□□□□ -0.09
TRAV25A0A0B4J276 KRTCAP3-201ENST00000288873 872 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
TRAV25A0A0B4J276 SYNE4-202ENST00000340477 1004 ntAPPRIS ALT2 TSL 1 (best) BASIC14.5□□□□□ -0.09
TRAV25A0A0B4J276 USF2-203ENST00000379134 648 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
TRAV25A0A0B4J276 DERL1-203ENST00000419562 918 ntTSL 2 BASIC14.5□□□□□ -0.09
TRAV25A0A0B4J276 TSPY7P-201ENST00000431358 1114 ntBASIC14.5□□□□□ -0.09
TRAV25A0A0B4J276 AC005056.1-201ENST00000435932 532 ntTSL 4 BASIC14.5□□□□□ -0.09
TRAV25A0A0B4J276 TSPY1-202ENST00000451548 1160 ntAPPRIS P5 TSL 1 (best) BASIC14.5□□□□□ -0.09
TRAV25A0A0B4J276 ASH1L-AS1-202ENST00000456633 911 ntTSL 2 BASIC14.5□□□□□ -0.09
TRAV25A0A0B4J276 PHF11-218ENST00000496623 1173 ntAPPRIS ALT2 TSL 2 BASIC14.5□□□□□ -0.09
TRAV25A0A0B4J276 AC093752.1-201ENST00000511950 605 ntTSL 4 BASIC14.5□□□□□ -0.09
TRAV25A0A0B4J276 AC005943.1-201ENST00000585937 1002 ntAPPRIS P1 TSL 3 BASIC14.5□□□□□ -0.09
TRAV25A0A0B4J276 PRKACA-209ENST00000590853 1101 ntTSL 5 BASIC14.5□□□□□ -0.09
TRAV25A0A0B4J276 POMGNT1-201ENST00000371984 2728 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
TRAV25A0A0B4J276 PCDHB11-202ENST00000624887 1973 ntTSL 2 BASIC14.5□□□□□ -0.09
TRAV25A0A0B4J276 PKD2-201ENST00000237596 5056 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
TRAV25A0A0B4J276 NAA60-235ENST00000576916 1567 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
TRAV25A0A0B4J276 ACTL6A-201ENST00000392662 1899 ntTSL 2 BASIC14.5□□□□□ -0.09
TRAV25A0A0B4J276 PPFIA1-201ENST00000253925 5234 ntAPPRIS P4 TSL 1 (best) BASIC14.5□□□□□ -0.09
TRAV25A0A0B4J276 RAB5A-201ENST00000273047 2536 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
TRAV25A0A0B4J276 OBSL1-203ENST00000373876 5503 ntTSL 5 BASIC14.5□□□□□ -0.09
TRAV25A0A0B4J276 RIMBP3C-201ENST00000331505 5475 ntAPPRIS ALT2 BASIC14.5□□□□□ -0.09
TRAV25A0A0B4J276 KCTD1-202ENST00000408011 2103 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
TRAV25A0A0B4J276 THTPA-202ENST00000404535 1779 ntAPPRIS P1 TSL 2 BASIC14.5□□□□□ -0.09
TRAV25A0A0B4J276 AC104417.2-201ENST00000562989 1793 ntBASIC14.5□□□□□ -0.09
TRAV25A0A0B4J276 HDAC2-201ENST00000368632 2084 ntTSL 2 BASIC14.5□□□□□ -0.09
TRAV25A0A0B4J276 RUVBL2-206ENST00000595090 2009 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
TRAV25A0A0B4J276 GPRIN2-201ENST00000374314 1696 ntAPPRIS P1 BASIC14.49□□□□□ -0.09
TRAV25A0A0B4J276 GAL3ST4-204ENST00000423751 1695 ntTSL 3 BASIC14.49□□□□□ -0.09
TRAV25A0A0B4J276 SCRT1-201ENST00000569446 3779 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
TRAV25A0A0B4J276 RTN4RL2-201ENST00000335099 2203 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
TRAV25A0A0B4J276 COL27A1-201ENST00000356083 7790 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
TRAV25A0A0B4J276 RCC2P6-201ENST00000526625 1557 ntBASIC14.49□□□□□ -0.09
TRAV25A0A0B4J276 CD70-201ENST00000245903 913 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
TRAV25A0A0B4J276 TMSB4X-201ENST00000380633 495 ntAPPRIS P1 TSL 3 BASIC14.49□□□□□ -0.09
TRAV25A0A0B4J276 AL596275.1-201ENST00000423464 877 ntBASIC14.49□□□□□ -0.09
TRAV25A0A0B4J276 AL357874.1-201ENST00000428948 574 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
TRAV25A0A0B4J276 B3GAT3P1-201ENST00000471720 806 ntBASIC14.49□□□□□ -0.09
TRAV25A0A0B4J276 Z85996.1-201ENST00000494644 937 ntBASIC14.49□□□□□ -0.09
TRAV25A0A0B4J276 AC092718.1-201ENST00000501068 1088 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
TRAV25A0A0B4J276 AC103855.2-201ENST00000533315 573 ntTSL 4 BASIC14.49□□□□□ -0.09
TRAV25A0A0B4J276 TARBP2-220ENST00000552857 916 ntTSL 5 BASIC14.49□□□□□ -0.09
TRAV25A0A0B4J276 FOXN3-AS1-201ENST00000555562 1077 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
TRAV25A0A0B4J276 FAM98C-205ENST00000588262 826 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
TRAV25A0A0B4J276 SNX21-213ENST00000614929 587 ntTSL 5 BASIC14.49□□□□□ -0.09
TRAV25A0A0B4J276 AC130371.2-201ENST00000619443 611 ntBASIC14.49□□□□□ -0.09
TRAV25A0A0B4J276 ABBA01031674.1-201ENST00000635145 728 ntBASIC14.49□□□□□ -0.09
TRAV25A0A0B4J276 MUTYH-203ENST00000372098 1839 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
TRAV25A0A0B4J276 MUTYH-204ENST00000372104 1823 ntAPPRIS ALT2 TSL 1 (best) BASIC14.49□□□□□ -0.09
TRAV25A0A0B4J276 MUTYH-205ENST00000372110 1809 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
TRAV25A0A0B4J276 MAP3K11-210ENST00000532507 1812 ntTSL 2 BASIC14.49□□□□□ -0.09
TRAV25A0A0B4J276 ZMAT3-203ENST00000432729 2944 ntAPPRIS ALT1 TSL 2 BASIC14.49□□□□□ -0.09
TRAV25A0A0B4J276 TBXA2R-201ENST00000375190 2608 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
TRAV25A0A0B4J276 NAT6-204ENST00000443094 1464 ntAPPRIS ALT2 TSL 1 (best) BASIC14.49□□□□□ -0.09
TRAV25A0A0B4J276 DALRD3-201ENST00000313778 1968 ntTSL 2 BASIC14.49□□□□□ -0.09
TRAV25A0A0B4J276 C6orf89-203ENST00000373685 1400 ntAPPRIS ALT2 TSL 5 BASIC14.49□□□□□ -0.09
TRAV25A0A0B4J276 COL13A1-202ENST00000357811 2991 ntAPPRIS ALT2 TSL 5 BASIC14.49□□□□□ -0.09
TRAV25A0A0B4J276 ZNF48-201ENST00000320159 3234 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
TRAV25A0A0B4J276 RNF169-201ENST00000299563 7823 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
TRAV25A0A0B4J276 SHE-201ENST00000304760 6243 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
TRAV25A0A0B4J276 LRRC23-207ENST00000433346 1387 ntTSL 5 BASIC14.48□□□□□ -0.09
TRAV25A0A0B4J276 KLF14-201ENST00000583337 2827 ntAPPRIS P1 BASIC14.48□□□□□ -0.09
TRAV25A0A0B4J276 SPTBN4-204ENST00000392025 8671 ntAPPRIS ALT1 TSL 5 BASIC14.48□□□□□ -0.09
TRAV25A0A0B4J276 CYP46A1-202ENST00000380228 1597 ntTSL 2 BASIC14.48□□□□□ -0.09
Retrieved 100 of 98,524 protein–RNA pairs in 42.3 ms