Protein–RNA interactions for Protein: A0A0B4J1U4

TRGV5, T-cell receptor gamma variable 5 (Fragment), humanhuman

Predictions only

Length 118 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRGV5A0A0B4J1U4 SRMS-201ENST00000217188 1516 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
TRGV5A0A0B4J1U4 TXNRD3-205ENST00000640797 1824 ntAPPRIS ALT2 TSL 2 BASIC17.3■□□□□ 0.36
TRGV5A0A0B4J1U4 ETS1-207ENST00000531611 2134 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
TRGV5A0A0B4J1U4 AC104417.2-201ENST00000562989 1793 ntBASIC17.3■□□□□ 0.36
TRGV5A0A0B4J1U4 GALNT13-201ENST00000392825 5536 ntAPPRIS P1 TSL 2 BASIC17.29■□□□□ 0.36
TRGV5A0A0B4J1U4 SOX8-201ENST00000293894 3049 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
TRGV5A0A0B4J1U4 LGALS9-202ENST00000313648 1378 ntTSL 3 BASIC17.29■□□□□ 0.36
TRGV5A0A0B4J1U4 SLC35B1-201ENST00000240333 1850 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
TRGV5A0A0B4J1U4 UPF1-201ENST00000262803 5348 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
TRGV5A0A0B4J1U4 MAG-202ENST00000392213 2390 ntAPPRIS P4 TSL 1 (best) BASIC17.29■□□□□ 0.36
TRGV5A0A0B4J1U4 C21orf91-203ENST00000400559 1593 ntAPPRIS ALT1 TSL 5 BASIC17.29■□□□□ 0.36
TRGV5A0A0B4J1U4 NUDT15-201ENST00000258662 2098 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
TRGV5A0A0B4J1U4 OXT-201ENST00000217386 513 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
TRGV5A0A0B4J1U4 AIF1L-203ENST00000372298 849 ntTSL 3 BASIC17.29■□□□□ 0.36
TRGV5A0A0B4J1U4 ROPN1L-202ENST00000503804 1291 ntAPPRIS P1 TSL 2 BASIC17.29■□□□□ 0.36
TRGV5A0A0B4J1U4 ZNF706-204ENST00000518336 501 ntAPPRIS P1 TSL 4 BASIC17.29■□□□□ 0.36
TRGV5A0A0B4J1U4 TMEM64-204ENST00000519519 873 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
TRGV5A0A0B4J1U4 LY6E-214ENST00000522971 857 ntAPPRIS P2 TSL 2 BASIC17.29■□□□□ 0.36
TRGV5A0A0B4J1U4 AC020911.2-202ENST00000588945 593 ntTSL 3 BASIC17.29■□□□□ 0.36
TRGV5A0A0B4J1U4 SLC22A18-202ENST00000347936 1542 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
TRGV5A0A0B4J1U4 AC148477.3-202ENST00000376617 1766 ntTSL 2 BASIC17.29■□□□□ 0.36
TRGV5A0A0B4J1U4 SELENOF-207ENST00000611507 1785 ntTSL 5 BASIC17.29■□□□□ 0.36
TRGV5A0A0B4J1U4 RBM45-207ENST00000616198 1788 ntAPPRIS ALT1 TSL 1 (best) BASIC17.29■□□□□ 0.36
TRGV5A0A0B4J1U4 COL15A1-201ENST00000375001 5496 ntAPPRIS P2 TSL 1 (best) BASIC17.29■□□□□ 0.36
TRGV5A0A0B4J1U4 KCNK4-207ENST00000539216 1723 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
TRGV5A0A0B4J1U4 DHRS3-204ENST00000616661 1722 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
TRGV5A0A0B4J1U4 ST3GAL3-219ENST00000372374 2170 ntTSL 5 BASIC17.29■□□□□ 0.36
TRGV5A0A0B4J1U4 KIAA0895-204ENST00000415803 2865 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
TRGV5A0A0B4J1U4 BSN-AS2-201ENST00000421598 2603 ntTSL 2 BASIC17.29■□□□□ 0.36
TRGV5A0A0B4J1U4 KRT8P11-201ENST00000409686 1436 ntBASIC17.29■□□□□ 0.36
TRGV5A0A0B4J1U4 TRIM73-205ENST00000450434 1425 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
TRGV5A0A0B4J1U4 AC092338.2-201ENST00000568827 1415 ntBASIC17.29■□□□□ 0.36
TRGV5A0A0B4J1U4 SUMF2-202ENST00000342190 1876 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
TRGV5A0A0B4J1U4 SMIM3-201ENST00000526627 2332 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
TRGV5A0A0B4J1U4 CLK3-202ENST00000395066 2621 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
TRGV5A0A0B4J1U4 DNAJC1-202ENST00000376980 2106 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
TRGV5A0A0B4J1U4 ICAM1-202ENST00000423829 1296 ntTSL 2 BASIC17.28■□□□□ 0.36
TRGV5A0A0B4J1U4 AL353719.1-201ENST00000566847 864 ntBASIC17.28■□□□□ 0.36
TRGV5A0A0B4J1U4 RNF165-206ENST00000590330 1049 ntTSL 2 BASIC17.28■□□□□ 0.36
TRGV5A0A0B4J1U4 SMIM8-209ENST00000608868 815 ntAPPRIS P1 TSL 5 BASIC17.28■□□□□ 0.36
TRGV5A0A0B4J1U4 AL023803.3-201ENST00000615559 522 ntBASIC17.28■□□□□ 0.36
TRGV5A0A0B4J1U4 SAE1-203ENST00000413379 2313 ntTSL 2 BASIC17.28■□□□□ 0.36
TRGV5A0A0B4J1U4 NAT6-204ENST00000443094 1464 ntAPPRIS ALT2 TSL 1 (best) BASIC17.28■□□□□ 0.36
TRGV5A0A0B4J1U4 HOXB6-201ENST00000225648 1660 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
TRGV5A0A0B4J1U4 KCNS2-201ENST00000287042 5219 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
TRGV5A0A0B4J1U4 AKIP1-207ENST00000529876 1421 ntTSL 2 BASIC17.28■□□□□ 0.36
TRGV5A0A0B4J1U4 CA11-201ENST00000084798 1844 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
TRGV5A0A0B4J1U4 RDX-202ENST00000405097 2761 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
TRGV5A0A0B4J1U4 GABRA2-214ENST00000515082 2366 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
TRGV5A0A0B4J1U4 PQLC2-201ENST00000375153 2153 ntAPPRIS P1 TSL 2 BASIC17.28■□□□□ 0.36
TRGV5A0A0B4J1U4 RAB11FIP4-201ENST00000394744 1968 ntTSL 2 BASIC17.28■□□□□ 0.36
TRGV5A0A0B4J1U4 POLD2-201ENST00000223361 1597 ntTSL 5 BASIC17.28■□□□□ 0.36
TRGV5A0A0B4J1U4 AC008691.1-203ENST00000515337 1580 ntTSL 2 BASIC17.28■□□□□ 0.36
TRGV5A0A0B4J1U4 APAF1-210ENST00000551964 5444 ntAPPRIS P4 TSL 1 (best) BASIC17.27■□□□□ 0.36
TRGV5A0A0B4J1U4 MAP3K15-201ENST00000338883 4012 ntAPPRIS P1 TSL 5 BASIC17.27■□□□□ 0.36
TRGV5A0A0B4J1U4 GABRD-205ENST00000638771 1707 ntAPPRIS ALT2 TSL 3 BASIC17.27■□□□□ 0.36
TRGV5A0A0B4J1U4 TUBA8-201ENST00000316027 1518 ntTSL 2 BASIC17.27■□□□□ 0.36
TRGV5A0A0B4J1U4 DDAH2-211ENST00000375787 1330 ntAPPRIS P1 TSL 5 BASIC17.27■□□□□ 0.36
TRGV5A0A0B4J1U4 PCCB-208ENST00000468777 1877 ntAPPRIS ALT2 TSL 3 BASIC17.27■□□□□ 0.36
TRGV5A0A0B4J1U4 KRAS-203ENST00000556131 1696 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
TRGV5A0A0B4J1U4 SPON2-203ENST00000431380 1802 ntAPPRIS P1 TSL 5 BASIC17.27■□□□□ 0.36
TRGV5A0A0B4J1U4 TIMM17B-201ENST00000376582 950 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
TRGV5A0A0B4J1U4 KRTAP5-3-201ENST00000399685 899 ntAPPRIS P1 BASIC17.27■□□□□ 0.36
TRGV5A0A0B4J1U4 HAGLR-204ENST00000425005 623 ntTSL 3 BASIC17.27■□□□□ 0.36
TRGV5A0A0B4J1U4 AC103564.1-201ENST00000437330 562 ntTSL 5 BASIC17.27■□□□□ 0.36
TRGV5A0A0B4J1U4 AC002467.1-201ENST00000457510 657 ntTSL 3 BASIC17.27■□□□□ 0.36
TRGV5A0A0B4J1U4 BNIP3L-206ENST00000523515 915 ntTSL 2 BASIC17.27■□□□□ 0.36
TRGV5A0A0B4J1U4 ABHD14B-208ENST00000525795 980 ntAPPRIS P1 TSL 3 BASIC17.27■□□□□ 0.36
TRGV5A0A0B4J1U4 AL445228.2-201ENST00000605589 952 ntBASIC17.27■□□□□ 0.36
TRGV5A0A0B4J1U4 CYB561D2-210ENST00000607121 1004 ntTSL 2 BASIC17.27■□□□□ 0.36
TRGV5A0A0B4J1U4 FP565260.3-205ENST00000620481 816 ntTSL 5 BASIC17.27■□□□□ 0.36
TRGV5A0A0B4J1U4 NFE2L1-204ENST00000536222 2172 ntTSL 2 BASIC17.27■□□□□ 0.36
TRGV5A0A0B4J1U4 TMPRSS5-212ENST00000545579 2163 ntAPPRIS ALT2 TSL 1 (best) BASIC17.27■□□□□ 0.36
TRGV5A0A0B4J1U4 SH2B3-201ENST00000341259 5406 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
TRGV5A0A0B4J1U4 APPL2-201ENST00000258530 3239 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
TRGV5A0A0B4J1U4 KRT17-205ENST00000540235 1438 ntTSL 5 BASIC17.27■□□□□ 0.35
TRGV5A0A0B4J1U4 ACD-203ENST00000602320 1408 ntAPPRIS ALT2 TSL 5 BASIC17.27■□□□□ 0.35
TRGV5A0A0B4J1U4 DTX2-212ENST00000446820 1770 ntAPPRIS ALT2 TSL 1 (best) BASIC17.27■□□□□ 0.35
TRGV5A0A0B4J1U4 PPHLN1-213ENST00000549190 1777 ntTSL 5 BASIC17.27■□□□□ 0.35
TRGV5A0A0B4J1U4 ZBTB7B-201ENST00000292176 2129 ntAPPRIS P3 TSL 1 (best) BASIC17.27■□□□□ 0.35
TRGV5A0A0B4J1U4 D2HGDH-201ENST00000321264 2617 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
TRGV5A0A0B4J1U4 CTCF-202ENST00000401394 2978 ntTSL 1 (best) BASIC17.27■□□□□ 0.35
TRGV5A0A0B4J1U4 PMPCB-202ENST00000428154 1714 ntTSL 1 (best) BASIC17.27■□□□□ 0.35
TRGV5A0A0B4J1U4 ACAA1-201ENST00000301810 1540 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
TRGV5A0A0B4J1U4 AP001922.1-201ENST00000499390 1504 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
TRGV5A0A0B4J1U4 AC126773.2-201ENST00000562172 1682 ntTSL 3 BASIC17.26■□□□□ 0.35
TRGV5A0A0B4J1U4 PRKAR2A-206ENST00000454963 1849 ntAPPRIS P1 TSL 2 BASIC17.26■□□□□ 0.35
TRGV5A0A0B4J1U4 CHD1L-201ENST00000361293 2484 ntTSL 2 BASIC17.26■□□□□ 0.35
TRGV5A0A0B4J1U4 SBDS-201ENST00000246868 1631 ntAPPRIS P2 TSL 1 (best) BASIC17.26■□□□□ 0.35
TRGV5A0A0B4J1U4 VGF-201ENST00000249330 2575 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
TRGV5A0A0B4J1U4 PAX3-201ENST00000258387 958 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
TRGV5A0A0B4J1U4 EDARADD-201ENST00000334232 858 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
TRGV5A0A0B4J1U4 GLRX2-201ENST00000367439 701 ntAPPRIS ALT2 TSL 1 (best) BASIC17.26■□□□□ 0.35
TRGV5A0A0B4J1U4 SUV39H2-204ENST00000378325 1292 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
TRGV5A0A0B4J1U4 UQCRQ-201ENST00000378665 586 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
TRGV5A0A0B4J1U4 TRPT1-202ENST00000394546 1058 ntAPPRIS ALT1 TSL 5 BASIC17.26■□□□□ 0.35
TRGV5A0A0B4J1U4 AL445685.1-201ENST00000425802 762 ntTSL 3 BASIC17.26■□□□□ 0.35
TRGV5A0A0B4J1U4 BX664615.1-201ENST00000443558 458 ntBASIC17.26■□□□□ 0.35
TRGV5A0A0B4J1U4 AC104076.2-201ENST00000448912 469 ntBASIC17.26■□□□□ 0.35
TRGV5A0A0B4J1U4 DUX4L26-201ENST00000489078 1255 ntBASIC17.26■□□□□ 0.35
Retrieved 100 of 98,524 protein–RNA pairs in 19.9 ms