Protein–RNA interactions for Protein: Q9Y2B5

VPS9D1, VPS9 domain-containing protein 1, humanhuman

Predictions only

Length 631 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS9D1Q9Y2B5 ATP5LP5-201ENST00000483050 299 ntBASIC6.83□□□□□ -1.32
VPS9D1Q9Y2B5 ACA59.1-201ENST00000515966 143 ntBASIC6.83□□□□□ -1.32
VPS9D1Q9Y2B5 RNA5SP170-201ENST00000517150 101 ntBASIC6.83□□□□□ -1.32
VPS9D1Q9Y2B5 RNU6-844P-201ENST00000517175 102 ntBASIC6.83□□□□□ -1.32
VPS9D1Q9Y2B5 AC090193.1-202ENST00000524355 566 ntTSL 4 BASIC6.83□□□□□ -1.32
VPS9D1Q9Y2B5 AP001007.2-201ENST00000525429 593 ntTSL 3 BASIC6.83□□□□□ -1.32
VPS9D1Q9Y2B5 SSU72P6-201ENST00000532644 488 ntBASIC6.83□□□□□ -1.32
VPS9D1Q9Y2B5 G2E3-AS1-202ENST00000550118 609 ntTSL 5 BASIC6.83□□□□□ -1.32
VPS9D1Q9Y2B5 FLVCR2-204ENST00000553587 584 ntTSL 2 BASIC6.83□□□□□ -1.32
VPS9D1Q9Y2B5 RPL23AP84-201ENST00000571193 464 ntBASIC6.83□□□□□ -1.32
VPS9D1Q9Y2B5 MIR5095-201ENST00000578844 88 ntBASIC6.83□□□□□ -1.32
VPS9D1Q9Y2B5 AC020914.7-201ENST00000594477 545 ntBASIC6.83□□□□□ -1.32
VPS9D1Q9Y2B5 AL591516.1-201ENST00000611326 274 ntBASIC6.83□□□□□ -1.32
VPS9D1Q9Y2B5 Z84484.1-202ENST00000612718 60 ntTSL 5 BASIC6.83□□□□□ -1.32
VPS9D1Q9Y2B5 AL354696.2-202ENST00000620300 613 ntTSL 2 BASIC6.83□□□□□ -1.32
VPS9D1Q9Y2B5 AC069234.4-201ENST00000621276 412 ntBASIC6.83□□□□□ -1.32
VPS9D1Q9Y2B5 EDRF1-AS1-214ENST00000622798 526 ntTSL 5 BASIC6.83□□□□□ -1.32
VPS9D1Q9Y2B5 AC243725.1-201ENST00000637164 436 ntBASIC6.83□□□□□ -1.32
VPS9D1Q9Y2B5 PDGFRA-201ENST00000257290 6576 ntAPPRIS P1 TSL 1 (best) BASIC6.83□□□□□ -1.32
VPS9D1Q9Y2B5 AC011287.1-206ENST00000638774 2642 ntTSL 5 BASIC6.83□□□□□ -1.32
VPS9D1Q9Y2B5 AP001148.1-201ENST00000624124 2359 ntBASIC6.83□□□□□ -1.32
VPS9D1Q9Y2B5 HSPD1P8-201ENST00000400121 1658 ntBASIC6.83□□□□□ -1.32
VPS9D1Q9Y2B5 CLCA3P-203ENST00000490028 2781 ntBASIC6.83□□□□□ -1.32
VPS9D1Q9Y2B5 USP16-203ENST00000399975 2960 ntAPPRIS ALT1 TSL 1 (best) BASIC6.83□□□□□ -1.32
VPS9D1Q9Y2B5 NCKAP5-203ENST00000405974 3636 ntAPPRIS ALT2 TSL 5 BASIC6.83□□□□□ -1.32
VPS9D1Q9Y2B5 SCN2A-209ENST00000636071 8881 ntAPPRIS ALT1 TSL 5 BASIC6.83□□□□□ -1.32
VPS9D1Q9Y2B5 SCN2A-214ENST00000636985 8856 ntTSL 5 BASIC6.83□□□□□ -1.32
VPS9D1Q9Y2B5 AL136317.2-201ENST00000619851 2254 ntTSL 2 BASIC6.83□□□□□ -1.32
VPS9D1Q9Y2B5 ZFY-207ENST00000625061 2273 ntTSL 2 BASIC6.83□□□□□ -1.32
VPS9D1Q9Y2B5 AL133243.4-201ENST00000623116 3109 ntBASIC6.83□□□□□ -1.32
VPS9D1Q9Y2B5 DAZ1-203ENST00000426000 1846 ntTSL 5 BASIC6.83□□□□□ -1.32
VPS9D1Q9Y2B5 PAICS-208ENST00000514888 3340 ntTSL 1 (best) BASIC6.83□□□□□ -1.32
VPS9D1Q9Y2B5 ZNF540-202ENST00000343599 3073 ntAPPRIS P3 TSL 5 BASIC6.82□□□□□ -1.32
VPS9D1Q9Y2B5 ADGRE1-203ENST00000381404 3056 ntTSL 2 BASIC6.82□□□□□ -1.32
VPS9D1Q9Y2B5 AC016251.2-201ENST00000623393 3089 ntBASIC6.82□□□□□ -1.32
VPS9D1Q9Y2B5 ZNF780A-203ENST00000450241 7500 ntTSL 2 BASIC6.82□□□□□ -1.32
VPS9D1Q9Y2B5 PAPD4-203ENST00000428308 2204 ntAPPRIS P3 TSL 2 BASIC6.82□□□□□ -1.32
VPS9D1Q9Y2B5 C2orf16-201ENST00000408964 6200 ntAPPRIS P2 BASIC6.82□□□□□ -1.32
VPS9D1Q9Y2B5 AC016583.1-201ENST00000624221 2431 ntBASIC6.82□□□□□ -1.32
VPS9D1Q9Y2B5 AADACL3-201ENST00000359318 3662 ntAPPRIS P1 TSL 3 BASIC6.82□□□□□ -1.32
VPS9D1Q9Y2B5 LINC01252-201ENST00000499291 3673 ntTSL 1 (best) BASIC6.82□□□□□ -1.32
VPS9D1Q9Y2B5 KYNU-202ENST00000375773 1772 ntTSL 1 (best) BASIC6.82□□□□□ -1.32
VPS9D1Q9Y2B5 AC022034.1-201ENST00000512867 2156 ntBASIC6.82□□□□□ -1.32
VPS9D1Q9Y2B5 RPL7L1-201ENST00000304734 3769 ntAPPRIS P1 TSL 1 (best) BASIC6.82□□□□□ -1.32
VPS9D1Q9Y2B5 AL512353.3-201ENST00000417517 1326 ntBASIC6.82□□□□□ -1.32
VPS9D1Q9Y2B5 CACNB4-203ENST00000397327 2112 ntTSL 5 BASIC6.82□□□□□ -1.32
VPS9D1Q9Y2B5 AC007359.1-202ENST00000419158 2939 ntTSL 1 (best) BASIC6.82□□□□□ -1.32
VPS9D1Q9Y2B5 AC008175.1-201ENST00000446299 2939 ntTSL 1 (best) BASIC6.82□□□□□ -1.32
VPS9D1Q9Y2B5 ZMAT1-206ENST00000540921 3139 ntAPPRIS P1 TSL 2 BASIC6.82□□□□□ -1.32
VPS9D1Q9Y2B5 NBPF14-209ENST00000620240 2656 ntTSL 5 BASIC6.82□□□□□ -1.32
VPS9D1Q9Y2B5 VTCN1-201ENST00000328189 2289 ntTSL 5 BASIC6.82□□□□□ -1.32
VPS9D1Q9Y2B5 ADTRP-203ENST00000414691 2058 ntAPPRIS P1 TSL 1 (best) BASIC6.82□□□□□ -1.32
VPS9D1Q9Y2B5 RLIMP1-201ENST00000339626 1680 ntBASIC6.82□□□□□ -1.32
VPS9D1Q9Y2B5 RNU6-790P-201ENST00000384479 105 ntBASIC6.82□□□□□ -1.32
VPS9D1Q9Y2B5 RNU1-56P-201ENST00000391303 164 ntBASIC6.82□□□□□ -1.32
VPS9D1Q9Y2B5 TEX38-202ENST00000415500 566 ntTSL 1 (best) BASIC6.82□□□□□ -1.32
VPS9D1Q9Y2B5 NUCB1-AS1-201ENST00000416432 433 ntTSL 2 BASIC6.82□□□□□ -1.32
VPS9D1Q9Y2B5 AL591178.2-201ENST00000429191 461 ntTSL 3 BASIC6.82□□□□□ -1.32
VPS9D1Q9Y2B5 HBG2-204ENST00000444587 307 ntTSL 2 BASIC6.82□□□□□ -1.32
VPS9D1Q9Y2B5 PARD3-AS1-201ENST00000446211 302 ntTSL 2 BASIC6.82□□□□□ -1.32
VPS9D1Q9Y2B5 AC010469.2-201ENST00000496412 480 ntBASIC6.82□□□□□ -1.32
VPS9D1Q9Y2B5 AP001972.1-201ENST00000529215 506 ntTSL 2 BASIC6.82□□□□□ -1.32
VPS9D1Q9Y2B5 AP002336.1-201ENST00000531426 422 ntTSL 2 BASIC6.82□□□□□ -1.32
VPS9D1Q9Y2B5 AL135978.1-201ENST00000553618 1266 ntBASIC6.82□□□□□ -1.32
VPS9D1Q9Y2B5 AP001007.3-201ENST00000560744 356 ntTSL 5 BASIC6.82□□□□□ -1.32
VPS9D1Q9Y2B5 AC009145.1-201ENST00000563230 433 ntTSL 3 BASIC6.82□□□□□ -1.32
VPS9D1Q9Y2B5 VN1R84P-201ENST00000593697 235 ntBASIC6.82□□□□□ -1.32
VPS9D1Q9Y2B5 ZNF675-204ENST00000599168 592 ntTSL 2 BASIC6.82□□□□□ -1.32
VPS9D1Q9Y2B5 RPL7P50-201ENST00000600588 727 ntBASIC6.82□□□□□ -1.32
VPS9D1Q9Y2B5 ZEB2-AS1-206ENST00000602006 572 ntTSL 5 BASIC6.82□□□□□ -1.32
VPS9D1Q9Y2B5 AL359881.1-201ENST00000602916 267 ntBASIC6.82□□□□□ -1.32
VPS9D1Q9Y2B5 AC005520.5-201ENST00000613926 164 ntBASIC6.82□□□□□ -1.32
VPS9D1Q9Y2B5 AL445647.2-201ENST00000615170 130 ntBASIC6.82□□□□□ -1.32
VPS9D1Q9Y2B5 AC008626.2-201ENST00000624425 248 ntBASIC6.82□□□□□ -1.32
VPS9D1Q9Y2B5 TLR4-202ENST00000394487 3908 ntTSL 1 (best) BASIC6.82□□□□□ -1.32
VPS9D1Q9Y2B5 TMEM133-201ENST00000303130 1953 ntAPPRIS P1 BASIC6.82□□□□□ -1.32
VPS9D1Q9Y2B5 TRIM36-209ENST00000514154 1952 ntTSL 1 (best) BASIC6.82□□□□□ -1.32
VPS9D1Q9Y2B5 ANK2-215ENST00000509550 3638 ntTSL 2 BASIC6.82□□□□□ -1.32
VPS9D1Q9Y2B5 GABRB2-209ENST00000612710 2470 ntTSL 1 (best) BASIC6.82□□□□□ -1.32
VPS9D1Q9Y2B5 ZNF793-202ENST00000542455 4073 ntTSL 5 BASIC6.81□□□□□ -1.32
VPS9D1Q9Y2B5 LINC00702-203ENST00000608792 6300 ntTSL 4 BASIC6.81□□□□□ -1.32
VPS9D1Q9Y2B5 GALNT11-201ENST00000415421 2555 ntTSL 1 (best) BASIC6.81□□□□□ -1.32
VPS9D1Q9Y2B5 TIMM21-201ENST00000169551 3095 ntAPPRIS P1 TSL 1 (best) BASIC6.81□□□□□ -1.32
VPS9D1Q9Y2B5 EPHA3-203ENST00000494014 3085 ntTSL 1 (best) BASIC6.81□□□□□ -1.32
VPS9D1Q9Y2B5 FAM208A-210ENST00000614531 3441 ntTSL 1 (best) BASIC6.81□□□□□ -1.32
VPS9D1Q9Y2B5 RTN4-203ENST00000357376 4110 ntTSL 1 (best) BASIC6.81□□□□□ -1.32
VPS9D1Q9Y2B5 ZNF329-203ENST00000597186 3930 ntAPPRIS P1 TSL 5 BASIC6.81□□□□□ -1.32
VPS9D1Q9Y2B5 TMEM167B-201ENST00000338272 3730 ntAPPRIS P1 TSL 1 (best) BASIC6.81□□□□□ -1.32
VPS9D1Q9Y2B5 TTC3-201ENST00000354749 9084 ntAPPRIS P1 TSL 1 (best) BASIC6.81□□□□□ -1.32
VPS9D1Q9Y2B5 PROM1-219ENST00000539194 3884 ntAPPRIS ALT2 TSL 5 BASIC6.81□□□□□ -1.32
VPS9D1Q9Y2B5 USP32-214ENST00000592339 4045 ntTSL 1 (best) BASIC6.81□□□□□ -1.32
VPS9D1Q9Y2B5 Y_RNA.44-201ENST00000362676 108 ntBASIC6.81□□□□□ -1.32
VPS9D1Q9Y2B5 RNA5SP442-201ENST00000365050 107 ntBASIC6.81□□□□□ -1.32
VPS9D1Q9Y2B5 RNA5SP355-201ENST00000365317 135 ntBASIC6.81□□□□□ -1.32
VPS9D1Q9Y2B5 ADIG-201ENST00000373348 430 ntTSL 2 BASIC6.81□□□□□ -1.32
VPS9D1Q9Y2B5 AL359922.1-201ENST00000404796 935 ntAPPRIS P1 TSL 5 BASIC6.81□□□□□ -1.32
VPS9D1Q9Y2B5 RN7SKP268-201ENST00000411107 316 ntBASIC6.81□□□□□ -1.32
VPS9D1Q9Y2B5 LIMS1-AS1-201ENST00000411710 477 ntTSL 3 BASIC6.81□□□□□ -1.32
VPS9D1Q9Y2B5 AL662791.3-201ENST00000413771 776 ntBASIC6.81□□□□□ -1.32
VPS9D1Q9Y2B5 TRAPPC2P10-201ENST00000415662 323 ntBASIC6.81□□□□□ -1.32
Retrieved 100 of 98,524 protein–RNA pairs in 88.8 ms