Protein–RNA interactions for Protein: Q9NQS3

NECTIN3, Nectin-3, humanhuman

Predictions only

Length 549 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NECTIN3Q9NQS3 NUP205-201ENST00000285968 6266 ntAPPRIS P1 TSL 1 (best) BASIC4.54□□□□□ -1.68
NECTIN3Q9NQS3 TNFAIP8-203ENST00000415806 1990 ntTSL 1 (best) BASIC4.54□□□□□ -1.68
NECTIN3Q9NQS3 ABCA12-201ENST00000272895 9100 ntAPPRIS P1 TSL 1 (best) BASIC4.54□□□□□ -1.68
NECTIN3Q9NQS3 HMGB1-204ENST00000399489 1727 ntTSL 1 (best) BASIC4.54□□□□□ -1.68
NECTIN3Q9NQS3 AL031985.3-201ENST00000565390 2449 ntBASIC4.54□□□□□ -1.68
NECTIN3Q9NQS3 SAMSN1-201ENST00000285670 2185 ntTSL 1 (best) BASIC4.54□□□□□ -1.68
NECTIN3Q9NQS3 ZEB1-205ENST00000446923 6267 ntAPPRIS ALT2 TSL 5 BASIC4.54□□□□□ -1.68
NECTIN3Q9NQS3 TRAPPC13-208ENST00000505553 1410 ntAPPRIS ALT1 TSL 1 (best) BASIC4.54□□□□□ -1.68
NECTIN3Q9NQS3 MTND4P16-201ENST00000466108 1367 ntBASIC4.53□□□□□ -1.68
NECTIN3Q9NQS3 RAP1B-201ENST00000250559 13438 ntAPPRIS P1 TSL 1 (best) BASIC4.53□□□□□ -1.68
NECTIN3Q9NQS3 KANSL1L-209ENST00000457374 2264 ntTSL 2 BASIC4.53□□□□□ -1.68
NECTIN3Q9NQS3 PAN3-202ENST00000399613 4940 ntAPPRIS ALT2 TSL 5 BASIC4.53□□□□□ -1.68
NECTIN3Q9NQS3 TMEM30A-202ENST00000370050 3775 ntTSL 1 (best) BASIC4.53□□□□□ -1.68
NECTIN3Q9NQS3 KYNU-202ENST00000375773 1772 ntTSL 1 (best) BASIC4.53□□□□□ -1.68
NECTIN3Q9NQS3 PLS3-209ENST00000539310 3037 ntAPPRIS P1 TSL 1 (best) BASIC4.53□□□□□ -1.68
NECTIN3Q9NQS3 PIGN-242ENST00000640145 4505 ntAPPRIS P1 TSL 5 BASIC4.53□□□□□ -1.68
NECTIN3Q9NQS3 ABI3BP-201ENST00000284322 4498 ntAPPRIS P2 TSL 1 (best) BASIC4.53□□□□□ -1.68
NECTIN3Q9NQS3 CCDC169-201ENST00000239859 708 ntAPPRIS P1 TSL 5 BASIC4.53□□□□□ -1.68
NECTIN3Q9NQS3 RPL23AP57-201ENST00000332361 466 ntBASIC4.53□□□□□ -1.68
NECTIN3Q9NQS3 RNU6-433P-201ENST00000363216 104 ntBASIC4.53□□□□□ -1.68
NECTIN3Q9NQS3 RNU1-20P-201ENST00000363314 162 ntBASIC4.53□□□□□ -1.68
NECTIN3Q9NQS3 RNU6-289P-201ENST00000364093 107 ntBASIC4.53□□□□□ -1.68
NECTIN3Q9NQS3 BANF2-202ENST00000377805 444 ntAPPRIS P1 TSL 1 (best) BASIC4.53□□□□□ -1.68
NECTIN3Q9NQS3 EQTN-202ENST00000380032 1033 ntAPPRIS P3 TSL 1 (best) BASIC4.53□□□□□ -1.68
NECTIN3Q9NQS3 RNA5SP87-201ENST00000384155 118 ntBASIC4.53□□□□□ -1.68
NECTIN3Q9NQS3 RNU6-878P-201ENST00000384578 110 ntBASIC4.53□□□□□ -1.68
NECTIN3Q9NQS3 SNORA26.8-201ENST00000391306 124 ntBASIC4.53□□□□□ -1.68
NECTIN3Q9NQS3 RPS24P12-201ENST00000402084 394 ntBASIC4.53□□□□□ -1.68
NECTIN3Q9NQS3 AL121834.1-202ENST00000404494 277 ntBASIC4.53□□□□□ -1.68
NECTIN3Q9NQS3 VDAC1P9-201ENST00000412766 841 ntBASIC4.53□□□□□ -1.68
NECTIN3Q9NQS3 AC114755.2-201ENST00000413520 361 ntBASIC4.53□□□□□ -1.68
NECTIN3Q9NQS3 ATG4AP1-201ENST00000416893 538 ntBASIC4.53□□□□□ -1.68
NECTIN3Q9NQS3 AC006369.1-201ENST00000419425 548 ntTSL 3 BASIC4.53□□□□□ -1.68
NECTIN3Q9NQS3 AC012065.2-201ENST00000421295 375 ntBASIC4.53□□□□□ -1.68
NECTIN3Q9NQS3 PDSS1P1-201ENST00000422953 1114 ntBASIC4.53□□□□□ -1.68
NECTIN3Q9NQS3 AL645608.4-201ENST00000423619 154 ntBASIC4.53□□□□□ -1.68
NECTIN3Q9NQS3 LINC00457-201ENST00000428706 413 ntTSL 3 BASIC4.53□□□□□ -1.68
NECTIN3Q9NQS3 CCNB1IP1P2-201ENST00000432876 818 ntBASIC4.53□□□□□ -1.68
NECTIN3Q9NQS3 AC007285.2-201ENST00000433088 518 ntTSL 3 BASIC4.53□□□□□ -1.68
NECTIN3Q9NQS3 GSTA7P-201ENST00000438425 448 ntBASIC4.53□□□□□ -1.68
NECTIN3Q9NQS3 AL772161.1-201ENST00000439130 476 ntBASIC4.53□□□□□ -1.68
NECTIN3Q9NQS3 OR1H1P-201ENST00000448731 937 ntBASIC4.53□□□□□ -1.68
NECTIN3Q9NQS3 TPT1P13-201ENST00000449760 499 ntBASIC4.53□□□□□ -1.68
NECTIN3Q9NQS3 AC010235.1-201ENST00000450613 547 ntTSL 3 BASIC4.53□□□□□ -1.68
NECTIN3Q9NQS3 VN1R32P-201ENST00000452234 905 ntBASIC4.53□□□□□ -1.68
NECTIN3Q9NQS3 AL512328.1-202ENST00000452640 850 ntTSL 3 BASIC4.53□□□□□ -1.68
NECTIN3Q9NQS3 SUN3-208ENST00000453192 801 ntTSL 5 BASIC4.53□□□□□ -1.68
NECTIN3Q9NQS3 ASH1L-IT1-201ENST00000458371 448 ntTSL 5 BASIC4.53□□□□□ -1.68
NECTIN3Q9NQS3 TIPARP-AS1-201ENST00000463449 735 ntTSL 3 BASIC4.53□□□□□ -1.68
NECTIN3Q9NQS3 RPL30P9-201ENST00000465586 330 ntBASIC4.53□□□□□ -1.68
NECTIN3Q9NQS3 SETP11-201ENST00000473027 690 ntBASIC4.53□□□□□ -1.68
NECTIN3Q9NQS3 RN7SL558P-201ENST00000497468 299 ntBASIC4.53□□□□□ -1.68
NECTIN3Q9NQS3 OR2A20P-203ENST00000498397 1268 ntBASIC4.53□□□□□ -1.68
NECTIN3Q9NQS3 Y_RNA.719-201ENST00000517156 106 ntBASIC4.53□□□□□ -1.68
NECTIN3Q9NQS3 RNU6-709P-201ENST00000517257 104 ntBASIC4.53□□□□□ -1.68
NECTIN3Q9NQS3 AC090796.1-201ENST00000520370 567 ntTSL 4 BASIC4.53□□□□□ -1.68
NECTIN3Q9NQS3 AC100871.2-201ENST00000522005 327 ntTSL 3 BASIC4.53□□□□□ -1.68
NECTIN3Q9NQS3 AC087276.1-201ENST00000529659 480 ntBASIC4.53□□□□□ -1.68
NECTIN3Q9NQS3 SOX9-AS1-214ENST00000540802 578 ntTSL 4 BASIC4.53□□□□□ -1.68
NECTIN3Q9NQS3 AC079075.1-201ENST00000559543 878 ntBASIC4.53□□□□□ -1.68
NECTIN3Q9NQS3 AC141257.3-201ENST00000572906 215 ntBASIC4.53□□□□□ -1.68
NECTIN3Q9NQS3 AC138207.6-203ENST00000581652 565 ntTSL 4 BASIC4.53□□□□□ -1.68
NECTIN3Q9NQS3 AC009704.1-201ENST00000583702 331 ntTSL 5 BASIC4.53□□□□□ -1.68
NECTIN3Q9NQS3 AC022726.1-201ENST00000587475 207 ntBASIC4.53□□□□□ -1.68
NECTIN3Q9NQS3 BNIP3P23-201ENST00000599655 511 ntBASIC4.53□□□□□ -1.68
NECTIN3Q9NQS3 AL121932.1-201ENST00000605542 214 ntBASIC4.53□□□□□ -1.68
NECTIN3Q9NQS3 AC064807.4-201ENST00000607201 407 ntBASIC4.53□□□□□ -1.68
NECTIN3Q9NQS3 AC105429.2-201ENST00000610567 517 ntBASIC4.53□□□□□ -1.68
NECTIN3Q9NQS3 FAM27B-201ENST00000610601 213 ntBASIC4.53□□□□□ -1.68
NECTIN3Q9NQS3 DAOA-AS1_2.2-201ENST00000610818 204 ntBASIC4.53□□□□□ -1.68
NECTIN3Q9NQS3 MIR7844-201ENST00000616161 122 ntBASIC4.53□□□□□ -1.68
NECTIN3Q9NQS3 AC073968.1-201ENST00000618594 637 ntBASIC4.53□□□□□ -1.68
NECTIN3Q9NQS3 AC091965.5-201ENST00000624785 342 ntBASIC4.53□□□□□ -1.68
NECTIN3Q9NQS3 TEX41-256ENST00000626411 368 ntTSL 5 BASIC4.53□□□□□ -1.68
NECTIN3Q9NQS3 CGA-204ENST00000627148 1010 ntAPPRIS P1 TSL 1 (best) BASIC4.53□□□□□ -1.68
NECTIN3Q9NQS3 AC055839.1-201ENST00000634467 498 ntBASIC4.53□□□□□ -1.68
NECTIN3Q9NQS3 AC006927.3-201ENST00000638789 384 ntBASIC4.53□□□□□ -1.68
NECTIN3Q9NQS3 MAPK10-353ENST00000641803 8483 ntAPPRIS P2 BASIC4.53□□□□□ -1.68
NECTIN3Q9NQS3 SDAD1P1-202ENST00000524156 2051 ntBASIC4.53□□□□□ -1.68
NECTIN3Q9NQS3 DDX4-204ENST00000505374 2884 ntAPPRIS P1 TSL 1 (best) BASIC4.53□□□□□ -1.68
NECTIN3Q9NQS3 AC073429.2-201ENST00000569694 1444 ntBASIC4.53□□□□□ -1.68
NECTIN3Q9NQS3 LDHAL6CP-202ENST00000550738 3224 ntBASIC4.53□□□□□ -1.68
NECTIN3Q9NQS3 OBSCN-204ENST00000366707 26772 ntAPPRIS P1 TSL 5 BASIC4.53□□□□□ -1.68
NECTIN3Q9NQS3 TES-202ENST00000393481 2763 ntTSL 1 (best) BASIC4.53□□□□□ -1.68
NECTIN3Q9NQS3 LINC01630-206ENST00000635103 4292 ntTSL 5 BASIC4.52□□□□□ -1.69
NECTIN3Q9NQS3 AC107029.2-201ENST00000462011 2305 ntTSL 2 BASIC4.52□□□□□ -1.69
NECTIN3Q9NQS3 R3HDM1-203ENST00000409606 3673 ntAPPRIS ALT1 TSL 2 BASIC4.52□□□□□ -1.69
NECTIN3Q9NQS3 PABPC1P7-201ENST00000413177 1513 ntBASIC4.52□□□□□ -1.69
NECTIN3Q9NQS3 ADNP-201ENST00000349014 5963 ntAPPRIS P1 TSL 1 (best) BASIC4.52□□□□□ -1.69
NECTIN3Q9NQS3 MAP3K20-202ENST00000375213 3741 ntAPPRIS P1 TSL 1 (best) BASIC4.52□□□□□ -1.69
NECTIN3Q9NQS3 CENPE-208ENST00000611174 8260 ntTSL 5 BASIC4.52□□□□□ -1.69
NECTIN3Q9NQS3 C8orf34-202ENST00000337103 3652 ntAPPRIS ALT2 TSL 1 (best) BASIC4.52□□□□□ -1.69
NECTIN3Q9NQS3 UTS2B-201ENST00000340524 2395 ntAPPRIS P1 TSL 2 BASIC4.52□□□□□ -1.69
NECTIN3Q9NQS3 ARHGEF38-202ENST00000420470 5454 ntAPPRIS P1 TSL 5 BASIC4.52□□□□□ -1.69
NECTIN3Q9NQS3 RNU1-108P-201ENST00000362556 161 ntBASIC4.52□□□□□ -1.69
NECTIN3Q9NQS3 ESD-201ENST00000378697 1079 ntTSL 5 BASIC4.52□□□□□ -1.69
NECTIN3Q9NQS3 RNU6-952P-201ENST00000391164 108 ntBASIC4.52□□□□□ -1.69
NECTIN3Q9NQS3 HIGD1C-201ENST00000398455 371 ntAPPRIS P1 TSL 1 (best) BASIC4.52□□□□□ -1.69
NECTIN3Q9NQS3 ZNF705D-201ENST00000400078 925 ntAPPRIS P1 TSL 2 BASIC4.52□□□□□ -1.69
NECTIN3Q9NQS3 TPMTP2-201ENST00000414372 726 ntBASIC4.52□□□□□ -1.69
Retrieved 100 of 98,524 protein–RNA pairs in 141.6 ms