Protein–RNA interactions for Protein: Q9NP79

VTA1, Vacuolar protein sorting-associated protein VTA1 homolog, humanhuman

Predictions only

Length 307 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VTA1Q9NP79 CNTN5-201ENST00000279463 5925 ntTSL 5 BASIC5.29□□□□□ -1.56
VTA1Q9NP79 UGT8-202ENST00000394511 2448 ntAPPRIS P1 TSL 1 (best) BASIC5.29□□□□□ -1.56
VTA1Q9NP79 RAD17P1-201ENST00000418130 2042 ntBASIC5.29□□□□□ -1.56
VTA1Q9NP79 CNKSR2-202ENST00000379510 5315 ntAPPRIS P1 TSL 1 (best) BASIC5.29□□□□□ -1.56
VTA1Q9NP79 SCEL-205ENST00000535157 3096 ntAPPRIS ALT2 TSL 2 BASIC5.29□□□□□ -1.56
VTA1Q9NP79 WDR72-202ENST00000396328 7507 ntAPPRIS P2 TSL 1 (best) BASIC5.29□□□□□ -1.56
VTA1Q9NP79 HYDIN-201ENST00000288168 2953 ntAPPRIS ALT2 TSL 1 (best) BASIC5.28□□□□□ -1.56
VTA1Q9NP79 MYBPC1-202ENST00000361685 3871 ntAPPRIS ALT2 TSL 1 (best) BASIC5.28□□□□□ -1.56
VTA1Q9NP79 C3orf67-AS1-202ENST00000482372 2203 ntTSL 2 BASIC5.28□□□□□ -1.56
VTA1Q9NP79 RIF1-203ENST00000428287 7722 ntAPPRIS ALT2 TSL 1 (best) BASIC5.28□□□□□ -1.56
VTA1Q9NP79 RNF180-202ENST00000389100 4906 ntAPPRIS P1 TSL 1 (best) BASIC5.28□□□□□ -1.56
VTA1Q9NP79 HDAC9-204ENST00000406451 9705 ntAPPRIS ALT1 TSL 1 (best) BASIC5.28□□□□□ -1.56
VTA1Q9NP79 CLDND1-208ENST00000503004 2818 ntAPPRIS P1 TSL 1 (best) BASIC5.28□□□□□ -1.56
VTA1Q9NP79 RNU6-433P-201ENST00000363216 104 ntBASIC5.28□□□□□ -1.56
VTA1Q9NP79 TEX35-205ENST00000367643 802 ntAPPRIS ALT2 TSL 2 BASIC5.28□□□□□ -1.56
VTA1Q9NP79 Z85994.1-201ENST00000406912 606 ntTSL 2 BASIC5.28□□□□□ -1.56
VTA1Q9NP79 AL162394.1-201ENST00000413271 419 ntTSL 2 BASIC5.28□□□□□ -1.56
VTA1Q9NP79 RPL17P12-201ENST00000413391 526 ntBASIC5.28□□□□□ -1.56
VTA1Q9NP79 AC007738.1-201ENST00000413892 348 ntBASIC5.28□□□□□ -1.56
VTA1Q9NP79 RPS7P13-201ENST00000413955 498 ntBASIC5.28□□□□□ -1.56
VTA1Q9NP79 AC097717.1-228ENST00000417006 754 ntTSL 3 BASIC5.28□□□□□ -1.56
VTA1Q9NP79 AL162254.1-202ENST00000419604 497 ntTSL 5 BASIC5.28□□□□□ -1.56
VTA1Q9NP79 AC092484.1-201ENST00000420548 833 ntTSL 5 BASIC5.28□□□□□ -1.56
VTA1Q9NP79 AC093843.1-201ENST00000424395 512 ntTSL 2 BASIC5.28□□□□□ -1.56
VTA1Q9NP79 RPS3AP44-201ENST00000425466 790 ntBASIC5.28□□□□□ -1.56
VTA1Q9NP79 COX6CP15-201ENST00000426313 211 ntBASIC5.28□□□□□ -1.56
VTA1Q9NP79 AL122034.1-201ENST00000427609 497 ntTSL 2 BASIC5.28□□□□□ -1.56
VTA1Q9NP79 LINC00382-201ENST00000427918 890 ntTSL 1 (best) BASIC5.28□□□□□ -1.56
VTA1Q9NP79 AL365184.2-201ENST00000431139 435 ntBASIC5.28□□□□□ -1.56
VTA1Q9NP79 RPL35AP21-201ENST00000437667 333 ntBASIC5.28□□□□□ -1.56
VTA1Q9NP79 AC105402.2-201ENST00000438503 358 ntBASIC5.28□□□□□ -1.56
VTA1Q9NP79 CDC27P1-201ENST00000445384 715 ntBASIC5.28□□□□□ -1.56
VTA1Q9NP79 VPS29-202ENST00000447578 996 ntTSL 1 (best) BASIC5.28□□□□□ -1.56
VTA1Q9NP79 AC006042.4-201ENST00000451066 692 ntTSL 5 BASIC5.28□□□□□ -1.56
VTA1Q9NP79 SSXP1-201ENST00000453640 473 ntBASIC5.28□□□□□ -1.56
VTA1Q9NP79 RPL5P32-201ENST00000454085 879 ntBASIC5.28□□□□□ -1.56
VTA1Q9NP79 AL356981.1-201ENST00000454879 684 ntBASIC5.28□□□□□ -1.56
VTA1Q9NP79 CFTRP1-201ENST00000456646 183 ntBASIC5.28□□□□□ -1.56
VTA1Q9NP79 AC090142.1-201ENST00000465776 462 ntBASIC5.28□□□□□ -1.56
VTA1Q9NP79 RPS15AP17-201ENST00000470598 390 ntBASIC5.28□□□□□ -1.56
VTA1Q9NP79 AC083829.1-201ENST00000503756 657 ntBASIC5.28□□□□□ -1.56
VTA1Q9NP79 MYL12BP2-201ENST00000503948 512 ntBASIC5.28□□□□□ -1.56
VTA1Q9NP79 AC007016.1-201ENST00000512110 244 ntBASIC5.28□□□□□ -1.56
VTA1Q9NP79 AC015795.1-201ENST00000513669 327 ntBASIC5.28□□□□□ -1.56
VTA1Q9NP79 MTND5P4-201ENST00000514978 288 ntBASIC5.28□□□□□ -1.56
VTA1Q9NP79 AP001961.1-201ENST00000515782 526 ntTSL 3 BASIC5.28□□□□□ -1.56
VTA1Q9NP79 IGLVVI-25-1-201ENST00000521893 249 ntBASIC5.28□□□□□ -1.56
VTA1Q9NP79 AL138812.1-201ENST00000525573 471 ntTSL 3 BASIC5.28□□□□□ -1.56
VTA1Q9NP79 AC055878.1-201ENST00000531858 281 ntTSL 3 BASIC5.28□□□□□ -1.56
VTA1Q9NP79 AC011595.3-201ENST00000546699 632 ntTSL 3 BASIC5.28□□□□□ -1.56
VTA1Q9NP79 PSMB7P1-201ENST00000556349 514 ntBASIC5.28□□□□□ -1.56
VTA1Q9NP79 AL049875.1-202ENST00000556620 857 ntTSL 3 BASIC5.28□□□□□ -1.56
VTA1Q9NP79 MIR3611-201ENST00000584484 83 ntBASIC5.28□□□□□ -1.56
VTA1Q9NP79 AC083760.1-201ENST00000589621 670 ntBASIC5.28□□□□□ -1.56
VTA1Q9NP79 AL391497.1-201ENST00000608671 547 ntBASIC5.28□□□□□ -1.56
VTA1Q9NP79 AP005019.3-201ENST00000620418 560 ntBASIC5.28□□□□□ -1.56
VTA1Q9NP79 AL356596.1-201ENST00000624230 379 ntBASIC5.28□□□□□ -1.56
VTA1Q9NP79 AP001642.1-201ENST00000624727 2117 ntBASIC5.28□□□□□ -1.56
VTA1Q9NP79 AL928596.1-201ENST00000636738 632 ntTSL 2 BASIC5.28□□□□□ -1.56
VTA1Q9NP79 LINC02475-202ENST00000512678 2622 ntTSL 1 (best) BASIC5.28□□□□□ -1.56
VTA1Q9NP79 EYA1-203ENST00000388740 3788 ntTSL 5 BASIC5.28□□□□□ -1.56
VTA1Q9NP79 CUL3-216ENST00000617432 1426 ntTSL 5 BASIC5.28□□□□□ -1.56
VTA1Q9NP79 ESRRG-202ENST00000360012 5431 ntAPPRIS P1 TSL 1 (best) BASIC5.28□□□□□ -1.56
VTA1Q9NP79 NBPF14-206ENST00000614999 10080 ntTSL 5 BASIC5.28□□□□□ -1.56
VTA1Q9NP79 ZNF28-204ENST00000457749 4556 ntAPPRIS P1 TSL 1 (best) BASIC5.28□□□□□ -1.56
VTA1Q9NP79 C6-202ENST00000337836 3551 ntAPPRIS P1 TSL 1 (best) BASIC5.28□□□□□ -1.56
VTA1Q9NP79 TMEM27-201ENST00000380342 1578 ntAPPRIS P1 TSL 1 (best) BASIC5.28□□□□□ -1.56
VTA1Q9NP79 TET2-203ENST00000380013 9679 ntAPPRIS P2 TSL 5 BASIC5.28□□□□□ -1.56
VTA1Q9NP79 SLCO1C1-201ENST00000266509 3365 ntAPPRIS P1 TSL 1 (best) BASIC5.28□□□□□ -1.56
VTA1Q9NP79 TMEM154-201ENST00000304385 10698 ntAPPRIS P2 TSL 1 (best) BASIC5.28□□□□□ -1.56
VTA1Q9NP79 MED13-201ENST00000397786 10465 ntAPPRIS P1 TSL 1 (best) BASIC5.28□□□□□ -1.56
VTA1Q9NP79 SCN2A-201ENST00000283256 8660 ntAPPRIS P5 TSL 1 (best) BASIC5.28□□□□□ -1.56
VTA1Q9NP79 MS4A14-203ENST00000395005 2813 ntTSL 1 (best) BASIC5.28□□□□□ -1.56
VTA1Q9NP79 CFAP47-203ENST00000378653 9943 ntAPPRIS P2 TSL 5 BASIC5.28□□□□□ -1.56
VTA1Q9NP79 ZNF568-216ENST00000619231 3797 ntAPPRIS P1 TSL 3 BASIC5.28□□□□□ -1.56
VTA1Q9NP79 ATP8B4-211ENST00000559829 4894 ntAPPRIS P1 TSL 5 BASIC5.28□□□□□ -1.56
VTA1Q9NP79 KCTD16-201ENST00000507359 13950 ntAPPRIS P1 TSL 1 (best) BASIC5.28□□□□□ -1.56
VTA1Q9NP79 GYPE-201ENST00000358615 1684 ntAPPRIS P1 TSL 1 (best) BASIC5.28□□□□□ -1.56
VTA1Q9NP79 FTX-210ENST00000603037 8347 ntTSL 5 BASIC5.27□□□□□ -1.57
VTA1Q9NP79 KCNJ16-204ENST00000585558 4014 ntTSL 1 (best) BASIC5.27□□□□□ -1.57
VTA1Q9NP79 AC004817.4-201ENST00000602396 3625 ntBASIC5.27□□□□□ -1.57
VTA1Q9NP79 ACKR4-201ENST00000249887 1914 ntAPPRIS P1 TSL 1 (best) BASIC5.27□□□□□ -1.57
VTA1Q9NP79 CLUL1-213ENST00000620089 1947 ntTSL 5 BASIC5.27□□□□□ -1.57
VTA1Q9NP79 ZBTB38-220ENST00000514251 7683 ntAPPRIS P1 TSL 2 BASIC5.27□□□□□ -1.57
VTA1Q9NP79 FGF7P2-201ENST00000332473 296 ntBASIC5.27□□□□□ -1.57
VTA1Q9NP79 IL18R1-202ENST00000334376 537 ntTSL 1 (best) BASIC5.27□□□□□ -1.57
VTA1Q9NP79 RNA5SP391-201ENST00000363456 119 ntBASIC5.27□□□□□ -1.57
VTA1Q9NP79 RNU6-657P-201ENST00000383904 107 ntBASIC5.27□□□□□ -1.57
VTA1Q9NP79 TRAV21-201ENST00000390449 343 ntAPPRIS P1 BASIC5.27□□□□□ -1.57
VTA1Q9NP79 ZNF603P-201ENST00000405613 487 ntBASIC5.27□□□□□ -1.57
VTA1Q9NP79 RNU2-16P-201ENST00000410712 136 ntBASIC5.27□□□□□ -1.57
VTA1Q9NP79 HMGB1P11-201ENST00000413899 637 ntBASIC5.27□□□□□ -1.57
VTA1Q9NP79 CDK8P2-201ENST00000415020 547 ntBASIC5.27□□□□□ -1.57
VTA1Q9NP79 DLGAP5P1-201ENST00000430307 464 ntBASIC5.27□□□□□ -1.57
VTA1Q9NP79 USP9YP28-201ENST00000435142 589 ntBASIC5.27□□□□□ -1.57
VTA1Q9NP79 LINC00704-202ENST00000443994 418 ntTSL 2 BASIC5.27□□□□□ -1.57
VTA1Q9NP79 COX6CP12-201ENST00000446748 202 ntBASIC5.27□□□□□ -1.57
VTA1Q9NP79 RPL30P9-201ENST00000465586 330 ntBASIC5.27□□□□□ -1.57
VTA1Q9NP79 AC104763.1-201ENST00000475274 360 ntBASIC5.27□□□□□ -1.57
VTA1Q9NP79 AC092104.1-201ENST00000497346 1441 ntBASIC5.27□□□□□ -1.57
Retrieved 100 of 98,524 protein–RNA pairs in 126.6 ms