Protein–RNA interactions for Protein: Q9BXY4

RSPO3, R-spondin-3, humanhuman

Predicted RBP Predictions only

Length 272 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RSPO3Q9BXY4 AL160411.1-201ENST00000429853 400 ntTSL 2 BASIC3.16□□□□□ -1.9
RSPO3Q9BXY4 MRPS18BP2-201ENST00000434310 759 ntBASIC3.16□□□□□ -1.9
RSPO3Q9BXY4 AL353718.1-201ENST00000451028 517 ntBASIC3.16□□□□□ -1.9
RSPO3Q9BXY4 AL023581.2-201ENST00000454588 552 ntTSL 2 BASIC3.16□□□□□ -1.9
RSPO3Q9BXY4 RPL7P49-201ENST00000471402 708 ntBASIC3.16□□□□□ -1.9
RSPO3Q9BXY4 AC022336.1-201ENST00000475510 337 ntBASIC3.16□□□□□ -1.9
RSPO3Q9BXY4 TIPARP-AS1-202ENST00000478005 554 ntTSL 4 BASIC3.16□□□□□ -1.9
RSPO3Q9BXY4 ACTR3P3-201ENST00000480448 893 ntBASIC3.16□□□□□ -1.9
RSPO3Q9BXY4 AC023050.1-201ENST00000498198 304 ntBASIC3.16□□□□□ -1.9
RSPO3Q9BXY4 CAB39P1-201ENST00000502277 460 ntBASIC3.16□□□□□ -1.9
RSPO3Q9BXY4 SCOC-205ENST00000502535 679 ntAPPRIS ALT1 TSL 3 BASIC3.16□□□□□ -1.9
RSPO3Q9BXY4 LINC01455-201ENST00000503167 561 ntTSL 4 BASIC3.16□□□□□ -1.9
RSPO3Q9BXY4 AC025768.1-201ENST00000510057 267 ntBASIC3.16□□□□□ -1.9
RSPO3Q9BXY4 SCARNA13-201ENST00000516672 275 ntBASIC3.16□□□□□ -1.9
RSPO3Q9BXY4 SNORA70.19-201ENST00000516717 90 ntBASIC3.16□□□□□ -1.9
RSPO3Q9BXY4 SCARNA20.6-201ENST00000517251 106 ntBASIC3.16□□□□□ -1.9
RSPO3Q9BXY4 IGKV2-26-201ENST00000518305 343 ntBASIC3.16□□□□□ -1.9
RSPO3Q9BXY4 AC009435.1-201ENST00000519555 574 ntTSL 4 BASIC3.16□□□□□ -1.9
RSPO3Q9BXY4 AC022874.1-201ENST00000526382 550 ntTSL 3 BASIC3.16□□□□□ -1.9
RSPO3Q9BXY4 AC092868.3-201ENST00000560515 784 ntBASIC3.16□□□□□ -1.9
RSPO3Q9BXY4 ZNF192P1-203ENST00000565888 810 ntBASIC3.16□□□□□ -1.9
RSPO3Q9BXY4 MIR3186-201ENST00000577404 85 ntBASIC3.16□□□□□ -1.9
RSPO3Q9BXY4 MIR3922-201ENST00000585192 84 ntBASIC3.16□□□□□ -1.9
RSPO3Q9BXY4 AC004542.2-201ENST00000602847 546 ntTSL 3 BASIC3.16□□□□□ -1.9
RSPO3Q9BXY4 AL160281.1-201ENST00000605307 311 ntBASIC3.16□□□□□ -1.9
RSPO3Q9BXY4 AC135803.1-201ENST00000608748 565 ntBASIC3.16□□□□□ -1.9
RSPO3Q9BXY4 AP003355.3-201ENST00000623465 114 ntBASIC3.16□□□□□ -1.9
RSPO3Q9BXY4 CGA-204ENST00000627148 1010 ntAPPRIS P1 TSL 1 (best) BASIC3.16□□□□□ -1.9
RSPO3Q9BXY4 AC073172.1-201ENST00000636967 851 ntTSL 5 BASIC3.16□□□□□ -1.9
RSPO3Q9BXY4 AC009093.8-201ENST00000641769 292 ntBASIC3.16□□□□□ -1.9
RSPO3Q9BXY4 SYNE1-201ENST00000341594 26584 ntAPPRIS ALT2 TSL 5 BASIC3.16□□□□□ -1.9
RSPO3Q9BXY4 RNF38-201ENST00000259605 5012 ntTSL 1 (best) BASIC3.16□□□□□ -1.9
RSPO3Q9BXY4 PRO1804-201ENST00000623780 2050 ntBASIC3.16□□□□□ -1.9
RSPO3Q9BXY4 MUC19-205ENST00000454784 24775 ntTSL 5 BASIC3.16□□□□□ -1.9
RSPO3Q9BXY4 MFSD8-233ENST00000641482 4860 ntBASIC3.16□□□□□ -1.9
RSPO3Q9BXY4 ADGRL2-207ENST00000370723 5254 ntTSL 5 BASIC3.16□□□□□ -1.9
RSPO3Q9BXY4 SUGT1-201ENST00000310528 14131 ntAPPRIS P3 TSL 1 (best) BASIC3.16□□□□□ -1.9
RSPO3Q9BXY4 SMCO3-201ENST00000316048 2104 ntAPPRIS P1 TSL 1 (best) BASIC3.16□□□□□ -1.9
RSPO3Q9BXY4 DDX60L-201ENST00000260184 6754 ntAPPRIS P1 TSL 5 BASIC3.16□□□□□ -1.9
RSPO3Q9BXY4 MBNL3-204ENST00000370853 2661 ntAPPRIS P4 TSL 1 (best) BASIC3.16□□□□□ -1.9
RSPO3Q9BXY4 AF127577.6-201ENST00000623352 2191 ntBASIC3.15□□□□□ -1.9
RSPO3Q9BXY4 TAB3-203ENST00000378930 6255 ntAPPRIS P1 TSL 1 (best) BASIC3.15□□□□□ -1.9
RSPO3Q9BXY4 KYNU-202ENST00000375773 1772 ntTSL 1 (best) BASIC3.15□□□□□ -1.9
RSPO3Q9BXY4 AL512283.1-201ENST00000606756 1384 ntBASIC3.15□□□□□ -1.9
RSPO3Q9BXY4 ADAM28-201ENST00000265769 7052 ntAPPRIS P1 TSL 1 (best) BASIC3.15□□□□□ -1.91
RSPO3Q9BXY4 RNA5SP72-201ENST00000364442 117 ntBASIC3.15□□□□□ -1.91
RSPO3Q9BXY4 CRP-203ENST00000368111 512 ntTSL 3 BASIC3.15□□□□□ -1.91
RSPO3Q9BXY4 AC069218.2-201ENST00000411665 344 ntBASIC3.15□□□□□ -1.91
RSPO3Q9BXY4 BTBD9-AS1-201ENST00000412822 560 ntTSL 2 BASIC3.15□□□□□ -1.91
RSPO3Q9BXY4 PRELID3BP11-201ENST00000414230 479 ntBASIC3.15□□□□□ -1.91
RSPO3Q9BXY4 AP000477.1-202ENST00000434859 847 ntTSL 3 BASIC3.15□□□□□ -1.91
RSPO3Q9BXY4 AL357507.1-201ENST00000435946 669 ntTSL 1 (best) BASIC3.15□□□□□ -1.91
RSPO3Q9BXY4 RNF148-202ENST00000447240 839 ntTSL 2 BASIC3.15□□□□□ -1.91
RSPO3Q9BXY4 HMGB3P30-201ENST00000457863 606 ntBASIC3.15□□□□□ -1.91
RSPO3Q9BXY4 LINC01753-201ENST00000458145 631 ntTSL 3 BASIC3.15□□□□□ -1.91
RSPO3Q9BXY4 AC023598.1-201ENST00000472521 361 ntBASIC3.15□□□□□ -1.91
RSPO3Q9BXY4 AC025518.1-201ENST00000479856 347 ntBASIC3.15□□□□□ -1.91
RSPO3Q9BXY4 LINC01192-207ENST00000492553 836 ntTSL 5 BASIC3.15□□□□□ -1.91
RSPO3Q9BXY4 AC104619.4-201ENST00000510773 249 ntBASIC3.15□□□□□ -1.91
RSPO3Q9BXY4 AC010280.3-201ENST00000515504 587 ntTSL 4 BASIC3.15□□□□□ -1.91
RSPO3Q9BXY4 AC104027.1-201ENST00000521887 300 ntBASIC3.15□□□□□ -1.91
RSPO3Q9BXY4 AC019227.1-201ENST00000526902 510 ntBASIC3.15□□□□□ -1.91
RSPO3Q9BXY4 AC074029.2-201ENST00000551045 634 ntBASIC3.15□□□□□ -1.91
RSPO3Q9BXY4 LINC01146-208ENST00000557355 548 ntTSL 4 BASIC3.15□□□□□ -1.91
RSPO3Q9BXY4 AC012229.1-201ENST00000558699 499 ntTSL 4 BASIC3.15□□□□□ -1.91
RSPO3Q9BXY4 LINC00557-201ENST00000563184 1279 ntBASIC3.15□□□□□ -1.91
RSPO3Q9BXY4 AC135050.5-201ENST00000576336 543 ntTSL 4 BASIC3.15□□□□□ -1.91
RSPO3Q9BXY4 AC007993.3-202ENST00000585329 725 ntTSL 5 BASIC3.15□□□□□ -1.91
RSPO3Q9BXY4 ZRANB2-AS2-213ENST00000591654 719 ntTSL 5 BASIC3.15□□□□□ -1.91
RSPO3Q9BXY4 SRGNP1-201ENST00000603392 451 ntBASIC3.15□□□□□ -1.91
RSPO3Q9BXY4 AL592494.3-201ENST00000609485 464 ntBASIC3.15□□□□□ -1.91
RSPO3Q9BXY4 RDM1-219ENST00000615378 542 ntTSL 3 BASIC3.15□□□□□ -1.91
RSPO3Q9BXY4 ZRANB2-AS2-221ENST00000624050 629 ntTSL 5 BASIC3.15□□□□□ -1.91
RSPO3Q9BXY4 SATB1-AS1-226ENST00000625515 776 ntTSL 5 BASIC3.15□□□□□ -1.91
RSPO3Q9BXY4 SATB1-AS1-259ENST00000629477 853 ntTSL 5 BASIC3.15□□□□□ -1.91
RSPO3Q9BXY4 DDX6P1-205ENST00000441966 1436 ntBASIC3.15□□□□□ -1.91
RSPO3Q9BXY4 AC119744.1-201ENST00000454746 1715 ntBASIC3.15□□□□□ -1.91
RSPO3Q9BXY4 MAPK10-373ENST00000641983 6772 ntBASIC3.15□□□□□ -1.91
RSPO3Q9BXY4 DSG2-AS1-202ENST00000583706 2024 ntTSL 5 BASIC3.15□□□□□ -1.91
RSPO3Q9BXY4 MACF1-201ENST00000289893 19141 ntTSL 5 BASIC3.15□□□□□ -1.91
RSPO3Q9BXY4 NMD3P1-201ENST00000439704 1488 ntBASIC3.15□□□□□ -1.91
RSPO3Q9BXY4 PLOD2-204ENST00000461497 3043 ntTSL 2 BASIC3.14□□□□□ -1.91
RSPO3Q9BXY4 RIOK3P1-201ENST00000418778 1528 ntBASIC3.14□□□□□ -1.91
RSPO3Q9BXY4 RNU1-70P-201ENST00000362618 164 ntBASIC3.14□□□□□ -1.91
RSPO3Q9BXY4 RNU6-1176P-201ENST00000390955 107 ntBASIC3.14□□□□□ -1.91
RSPO3Q9BXY4 AL034403.1-201ENST00000399414 885 ntBASIC3.14□□□□□ -1.91
RSPO3Q9BXY4 RNU2-65P-201ENST00000410162 185 ntBASIC3.14□□□□□ -1.91
RSPO3Q9BXY4 RPS3AP25-201ENST00000411660 793 ntBASIC3.14□□□□□ -1.91
RSPO3Q9BXY4 MTND4LP14-201ENST00000429447 288 ntBASIC3.14□□□□□ -1.91
RSPO3Q9BXY4 ETF1P3-201ENST00000430422 1160 ntBASIC3.14□□□□□ -1.91
RSPO3Q9BXY4 REG1CP-203ENST00000434852 460 ntTSL 4 BASIC3.14□□□□□ -1.91
RSPO3Q9BXY4 SDR42E1P3-201ENST00000438345 502 ntBASIC3.14□□□□□ -1.91
RSPO3Q9BXY4 AL445490.2-201ENST00000440492 441 ntTSL 3 BASIC3.14□□□□□ -1.91
RSPO3Q9BXY4 XKRY2-201ENST00000442362 1093 ntBASIC3.14□□□□□ -1.91
RSPO3Q9BXY4 RPL31P20-201ENST00000449593 360 ntBASIC3.14□□□□□ -1.91
RSPO3Q9BXY4 AC073387.1-201ENST00000453261 709 ntBASIC3.14□□□□□ -1.91
RSPO3Q9BXY4 RN7SL330P-201ENST00000469709 307 ntBASIC3.14□□□□□ -1.91
RSPO3Q9BXY4 RN7SL442P-201ENST00000473804 320 ntBASIC3.14□□□□□ -1.91
RSPO3Q9BXY4 AC078817.1-201ENST00000492623 435 ntBASIC3.14□□□□□ -1.91
RSPO3Q9BXY4 PCNAP1-201ENST00000505363 709 ntBASIC3.14□□□□□ -1.91
Retrieved 100 of 98,524 protein–RNA pairs in 91.5 ms