Protein–RNA interactions for Protein: Q96P16

RPRD1A, Regulation of nuclear pre-mRNA domain-containing protein 1A, humanhuman

Predicted RBP Predictions only

Length 312 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPRD1AQ96P16 RNU6-796P-201ENST00000391086 107 ntBASIC3.74□□□□□ -1.81
RPRD1AQ96P16 HMGN2P8-201ENST00000391458 268 ntBASIC3.74□□□□□ -1.81
RPRD1AQ96P16 ATP5F1P4-201ENST00000397288 746 ntBASIC3.74□□□□□ -1.81
RPRD1AQ96P16 PRRC2CP1-201ENST00000404428 159 ntBASIC3.74□□□□□ -1.81
RPRD1AQ96P16 MTCO3P31-201ENST00000405526 789 ntBASIC3.74□□□□□ -1.81
RPRD1AQ96P16 HMGB3P31-201ENST00000413333 595 ntBASIC3.74□□□□□ -1.81
RPRD1AQ96P16 AL158839.1-201ENST00000413943 575 ntTSL 2 BASIC3.74□□□□□ -1.81
RPRD1AQ96P16 SYF2P2-201ENST00000417620 583 ntBASIC3.74□□□□□ -1.81
RPRD1AQ96P16 AC007349.1-201ENST00000419326 587 ntTSL 4 BASIC3.74□□□□□ -1.81
RPRD1AQ96P16 LINC01389-201ENST00000420876 483 ntTSL 3 BASIC3.74□□□□□ -1.81
RPRD1AQ96P16 AP003025.1-201ENST00000421650 149 ntTSL 1 (best) BASIC3.74□□□□□ -1.81
RPRD1AQ96P16 AL049610.1-201ENST00000423374 372 ntBASIC3.74□□□□□ -1.81
RPRD1AQ96P16 AC004870.4-201ENST00000424359 360 ntTSL 2 BASIC3.74□□□□□ -1.81
RPRD1AQ96P16 NPSR1-AS1-205ENST00000436945 1406 ntTSL 1 (best) BASIC3.74□□□□□ -1.81
RPRD1AQ96P16 LINC01923-201ENST00000443261 592 ntTSL 5 BASIC3.74□□□□□ -1.81
RPRD1AQ96P16 AC092666.1-202ENST00000493400 442 ntTSL 2 BASIC3.74□□□□□ -1.81
RPRD1AQ96P16 LINC02146-201ENST00000504244 509 ntTSL 3 BASIC3.74□□□□□ -1.81
RPRD1AQ96P16 AC008565.1-201ENST00000509046 885 ntBASIC3.74□□□□□ -1.81
RPRD1AQ96P16 AC008780.1-201ENST00000513392 409 ntTSL 5 BASIC3.74□□□□□ -1.81
RPRD1AQ96P16 RANP9-201ENST00000519957 271 ntBASIC3.74□□□□□ -1.81
RPRD1AQ96P16 AC010306.1-201ENST00000523223 1117 ntBASIC3.74□□□□□ -1.81
RPRD1AQ96P16 AC083923.1-201ENST00000523708 376 ntBASIC3.74□□□□□ -1.81
RPRD1AQ96P16 AL049779.1-201ENST00000553306 670 ntTSL 2 BASIC3.74□□□□□ -1.81
RPRD1AQ96P16 MEG8-215ENST00000555354 469 ntTSL 3 BASIC3.74□□□□□ -1.81
RPRD1AQ96P16 AL161804.1-201ENST00000555600 708 ntTSL 3 BASIC3.74□□□□□ -1.81
RPRD1AQ96P16 AL133279.2-201ENST00000556546 428 ntTSL 3 BASIC3.74□□□□□ -1.81
RPRD1AQ96P16 AC007823.1-201ENST00000569932 1566 ntBASIC3.74□□□□□ -1.81
RPRD1AQ96P16 MIR4429-201ENST00000580105 73 ntBASIC3.74□□□□□ -1.81
RPRD1AQ96P16 AL034549.1-201ENST00000615120 578 ntTSL 2 BASIC3.74□□□□□ -1.81
RPRD1AQ96P16 AC121761.2-201ENST00000617300 689 ntBASIC3.74□□□□□ -1.81
RPRD1AQ96P16 AL732618.1-201ENST00000623251 301 ntBASIC3.74□□□□□ -1.81
RPRD1AQ96P16 AC112200.1-201ENST00000625015 234 ntBASIC3.74□□□□□ -1.81
RPRD1AQ96P16 FOXP2-227ENST00000638397 240 ntTSL 5 BASIC3.74□□□□□ -1.81
RPRD1AQ96P16 OR6C2-202ENST00000641202 2105 ntAPPRIS P1 BASIC3.74□□□□□ -1.81
RPRD1AQ96P16 GLCE-202ENST00000559420 4840 ntTSL 1 (best) BASIC3.74□□□□□ -1.81
RPRD1AQ96P16 SULT1B1-201ENST00000310613 7115 ntAPPRIS P1 TSL 1 (best) BASIC3.73□□□□□ -1.81
RPRD1AQ96P16 LINC00561-201ENST00000565815 2738 ntBASIC3.73□□□□□ -1.81
RPRD1AQ96P16 ESCO1-201ENST00000269214 4523 ntAPPRIS P1 TSL 1 (best) BASIC3.73□□□□□ -1.81
RPRD1AQ96P16 RTKN2-201ENST00000315289 2383 ntTSL 2 BASIC3.73□□□□□ -1.81
RPRD1AQ96P16 CASC1-203ENST00000395987 2363 ntAPPRIS P3 TSL 1 (best) BASIC3.73□□□□□ -1.81
RPRD1AQ96P16 PLPPR4-201ENST00000370184 4505 ntTSL 5 BASIC3.73□□□□□ -1.81
RPRD1AQ96P16 SNORD9-201ENST00000362566 104 ntBASIC3.73□□□□□ -1.81
RPRD1AQ96P16 TAS2R19-201ENST00000390673 1002 ntAPPRIS P1 BASIC3.73□□□□□ -1.81
RPRD1AQ96P16 AC069218.2-201ENST00000411665 344 ntBASIC3.73□□□□□ -1.81
RPRD1AQ96P16 AL158825.1-201ENST00000414735 521 ntBASIC3.73□□□□□ -1.81
RPRD1AQ96P16 AC007390.1-201ENST00000415722 356 ntBASIC3.73□□□□□ -1.81
RPRD1AQ96P16 AC100848.1-201ENST00000417298 637 ntTSL 3 BASIC3.73□□□□□ -1.81
RPRD1AQ96P16 RPS15AP40-201ENST00000419621 391 ntBASIC3.73□□□□□ -1.81
RPRD1AQ96P16 IFNNP1-201ENST00000429219 553 ntBASIC3.73□□□□□ -1.81
RPRD1AQ96P16 AC091286.1-201ENST00000431233 461 ntBASIC3.73□□□□□ -1.81
RPRD1AQ96P16 HSPD1P21-201ENST00000436541 245 ntBASIC3.73□□□□□ -1.81
RPRD1AQ96P16 RPL29P29-201ENST00000448725 423 ntBASIC3.73□□□□□ -1.81
RPRD1AQ96P16 AL392046.1-203ENST00000450106 651 ntTSL 2 BASIC3.73□□□□□ -1.81
RPRD1AQ96P16 SNORD105B-201ENST00000458770 79 ntBASIC3.73□□□□□ -1.81
RPRD1AQ96P16 snoU13.7-201ENST00000459220 104 ntBASIC3.73□□□□□ -1.81
RPRD1AQ96P16 AP000893.1-201ENST00000474462 794 ntBASIC3.73□□□□□ -1.81
RPRD1AQ96P16 AC018816.1-205ENST00000489771 509 ntTSL 2 BASIC3.73□□□□□ -1.81
RPRD1AQ96P16 AC096576.3-201ENST00000505528 721 ntTSL 5 BASIC3.73□□□□□ -1.81
RPRD1AQ96P16 SLC7A11-AS1-201ENST00000510066 817 ntTSL 2 BASIC3.73□□□□□ -1.81
RPRD1AQ96P16 AC097535.1-201ENST00000515263 332 ntTSL 3 BASIC3.73□□□□□ -1.81
RPRD1AQ96P16 RN7SKP83-201ENST00000516512 178 ntBASIC3.73□□□□□ -1.81
RPRD1AQ96P16 RN7SKP277-201ENST00000516895 283 ntBASIC3.73□□□□□ -1.81
RPRD1AQ96P16 SOD1P3-201ENST00000518682 454 ntBASIC3.73□□□□□ -1.81
RPRD1AQ96P16 NECAB1-205ENST00000522820 811 ntTSL 2 BASIC3.73□□□□□ -1.81
RPRD1AQ96P16 VNN2-207ENST00000525289 900 ntTSL 1 (best) BASIC3.73□□□□□ -1.81
RPRD1AQ96P16 HIGD1AP10-201ENST00000527837 282 ntBASIC3.73□□□□□ -1.81
RPRD1AQ96P16 AC007688.2-201ENST00000545158 369 ntTSL 3 BASIC3.73□□□□□ -1.81
RPRD1AQ96P16 AL133457.1-201ENST00000564251 987 ntBASIC3.73□□□□□ -1.81
RPRD1AQ96P16 LINC02520-201ENST00000570443 537 ntTSL 4 BASIC3.73□□□□□ -1.81
RPRD1AQ96P16 ZFP30-209ENST00000589018 444 ntTSL 5 BASIC3.73□□□□□ -1.81
RPRD1AQ96P16 AC097717.1-230ENST00000597051 738 ntTSL 3 BASIC3.73□□□□□ -1.81
RPRD1AQ96P16 SNORA51-201ENST00000606420 132 ntBASIC3.73□□□□□ -1.81
RPRD1AQ96P16 AC018754.1-201ENST00000607486 925 ntBASIC3.73□□□□□ -1.81
RPRD1AQ96P16 C8orf89-201ENST00000613105 495 ntAPPRIS ALT2 TSL 1 (best) BASIC3.73□□□□□ -1.81
RPRD1AQ96P16 STMN1P1-201ENST00000617809 440 ntBASIC3.73□□□□□ -1.81
RPRD1AQ96P16 MAGI2-AS3-224ENST00000619135 205 ntTSL 5 BASIC3.73□□□□□ -1.81
RPRD1AQ96P16 CGA-204ENST00000627148 1010 ntAPPRIS P1 TSL 1 (best) BASIC3.73□□□□□ -1.81
RPRD1AQ96P16 TEX41-300ENST00000631048 69 ntTSL 5 BASIC3.73□□□□□ -1.81
RPRD1AQ96P16 AF127577.6-201ENST00000623352 2191 ntBASIC3.73□□□□□ -1.81
RPRD1AQ96P16 RAB3C-201ENST00000282878 8896 ntAPPRIS P1 TSL 1 (best) BASIC3.73□□□□□ -1.81
RPRD1AQ96P16 FIGNL1-203ENST00000419119 3700 ntAPPRIS P1 TSL 1 (best) BASIC3.73□□□□□ -1.81
RPRD1AQ96P16 FAM111A-207ENST00000531147 3996 ntAPPRIS P1 TSL 1 (best) BASIC3.73□□□□□ -1.81
RPRD1AQ96P16 SEMA3D-201ENST00000284136 6265 ntAPPRIS P1 TSL 5 BASIC3.72□□□□□ -1.81
RPRD1AQ96P16 SERPINI2-206ENST00000471111 1331 ntAPPRIS P1 TSL 1 (best) BASIC3.72□□□□□ -1.81
RPRD1AQ96P16 CRISP3-201ENST00000263045 2170 ntAPPRIS P3 TSL 1 (best) BASIC3.72□□□□□ -1.81
RPRD1AQ96P16 CCDC168-201ENST00000322527 21466 ntAPPRIS P1 TSL 3 BASIC3.72□□□□□ -1.81
RPRD1AQ96P16 DEFB110-201ENST00000371148 384 ntAPPRIS P3 TSL 1 (best) BASIC3.72□□□□□ -1.81
RPRD1AQ96P16 OR6C3-201ENST00000379667 936 ntAPPRIS P1 BASIC3.72□□□□□ -1.81
RPRD1AQ96P16 MIR23B-201ENST00000384832 97 ntBASIC3.72□□□□□ -1.81
RPRD1AQ96P16 DNAJC19P6-201ENST00000401853 280 ntBASIC3.72□□□□□ -1.81
RPRD1AQ96P16 LINC00427-201ENST00000412722 430 ntTSL 2 BASIC3.72□□□□□ -1.81
RPRD1AQ96P16 RPS29P4-201ENST00000414733 161 ntBASIC3.72□□□□□ -1.81
RPRD1AQ96P16 AL357078.2-201ENST00000416486 427 ntBASIC3.72□□□□□ -1.81
RPRD1AQ96P16 AC069157.1-201ENST00000421749 137 ntBASIC3.72□□□□□ -1.81
RPRD1AQ96P16 PTP4A1P3-201ENST00000433661 420 ntBASIC3.72□□□□□ -1.81
RPRD1AQ96P16 AC106707.2-201ENST00000484182 374 ntBASIC3.72□□□□□ -1.81
RPRD1AQ96P16 VPS13A-211ENST00000484581 1155 ntTSL 2 BASIC3.72□□□□□ -1.81
RPRD1AQ96P16 LINC02049-201ENST00000490647 747 ntTSL 1 (best) BASIC3.72□□□□□ -1.81
RPRD1AQ96P16 THAP6-203ENST00000502620 582 ntTSL 3 BASIC3.72□□□□□ -1.81
RPRD1AQ96P16 AC002460.1-201ENST00000504394 370 ntTSL 3 BASIC3.72□□□□□ -1.81
Retrieved 100 of 98,524 protein–RNA pairs in 102.8 ms