Protein–RNA interactions for Protein: P57739

CLDN2, Claudin-2, humanhuman

Predictions only

Length 230 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN2P57739 CNTN1-201ENST00000347616 5507 ntAPPRIS P1 TSL 1 (best) BASIC4.25□□□□□ -1.73
CLDN2P57739 BBX-206ENST00000415149 8930 ntAPPRIS P3 TSL 1 (best) BASIC4.25□□□□□ -1.73
CLDN2P57739 CNTN5-209ENST00000528682 3800 ntAPPRIS P4 TSL 5 BASIC4.25□□□□□ -1.73
CLDN2P57739 LINC00561-201ENST00000565815 2738 ntBASIC4.24□□□□□ -1.73
CLDN2P57739 ORC4-216ENST00000540442 6472 ntTSL 2 BASIC4.24□□□□□ -1.73
CLDN2P57739 RASAL2-203ENST00000462775 14453 ntAPPRIS ALT2 TSL 1 (best) BASIC4.24□□□□□ -1.73
CLDN2P57739 DYNC2H1-201ENST00000334267 2984 ntTSL 1 (best) BASIC4.24□□□□□ -1.73
CLDN2P57739 TEX11-201ENST00000344304 2977 ntAPPRIS P3 TSL 5 BASIC4.24□□□□□ -1.73
CLDN2P57739 NXT2-201ENST00000218004 2692 ntTSL 1 (best) BASIC4.24□□□□□ -1.73
CLDN2P57739 UBE4A-203ENST00000545354 2149 ntTSL 2 BASIC4.24□□□□□ -1.73
CLDN2P57739 FANCI-202ENST00000310775 4743 ntAPPRIS ALT2 TSL 1 (best) BASIC4.24□□□□□ -1.73
CLDN2P57739 CSN1S1-201ENST00000246891 985 ntAPPRIS P3 TSL 1 (best) BASIC4.24□□□□□ -1.73
CLDN2P57739 AL391994.1-201ENST00000254724 282 ntBASIC4.24□□□□□ -1.73
CLDN2P57739 RN7SKP224-201ENST00000364140 325 ntBASIC4.24□□□□□ -1.73
CLDN2P57739 RNA5SP283-201ENST00000365604 119 ntBASIC4.24□□□□□ -1.73
CLDN2P57739 CFHR3-203ENST00000391985 1043 ntTSL 2 BASIC4.24□□□□□ -1.73
CLDN2P57739 AC025750.1-201ENST00000399891 379 ntBASIC4.24□□□□□ -1.73
CLDN2P57739 ZNF603P-201ENST00000405613 487 ntBASIC4.24□□□□□ -1.73
CLDN2P57739 AL512430.2-201ENST00000406786 339 ntBASIC4.24□□□□□ -1.73
CLDN2P57739 RNU2-21P-201ENST00000410368 188 ntBASIC4.24□□□□□ -1.73
CLDN2P57739 LINC01934-201ENST00000414750 391 ntTSL 3 BASIC4.24□□□□□ -1.73
CLDN2P57739 AC010163.2-201ENST00000416341 381 ntTSL 2 BASIC4.24□□□□□ -1.73
CLDN2P57739 AC092484.1-201ENST00000420548 833 ntTSL 5 BASIC4.24□□□□□ -1.73
CLDN2P57739 LINC01427-201ENST00000420928 504 ntTSL 3 BASIC4.24□□□□□ -1.73
CLDN2P57739 AC009276.1-201ENST00000422042 253 ntTSL 5 BASIC4.24□□□□□ -1.73
CLDN2P57739 AC011233.1-201ENST00000422812 283 ntBASIC4.24□□□□□ -1.73
CLDN2P57739 AL022400.1-201ENST00000423946 935 ntBASIC4.24□□□□□ -1.73
CLDN2P57739 LINC01674-201ENST00000427446 504 ntTSL 3 BASIC4.24□□□□□ -1.73
CLDN2P57739 AC092839.2-201ENST00000431130 377 ntTSL 3 BASIC4.24□□□□□ -1.73
CLDN2P57739 AC016912.1-201ENST00000432241 545 ntTSL 3 BASIC4.24□□□□□ -1.73
CLDN2P57739 POU6F2-AS1-201ENST00000433519 381 ntTSL 3 BASIC4.24□□□□□ -1.73
CLDN2P57739 RPL23AP16-201ENST00000441715 421 ntBASIC4.24□□□□□ -1.73
CLDN2P57739 NCOR1P1-202ENST00000486162 291 ntBASIC4.24□□□□□ -1.73
CLDN2P57739 AC005726.1-201ENST00000494679 427 ntBASIC4.24□□□□□ -1.73
CLDN2P57739 HMGB1P21-201ENST00000502313 581 ntBASIC4.24□□□□□ -1.73
CLDN2P57739 SUB1-203ENST00000502897 562 ntAPPRIS P1 TSL 4 BASIC4.24□□□□□ -1.73
CLDN2P57739 MSMO1-203ENST00000504317 1026 ntTSL 1 (best) BASIC4.24□□□□□ -1.73
CLDN2P57739 AC147055.4-201ENST00000504399 745 ntBASIC4.24□□□□□ -1.73
CLDN2P57739 AC090071.1-201ENST00000507713 644 ntBASIC4.24□□□□□ -1.73
CLDN2P57739 SUB1-211ENST00000512913 684 ntAPPRIS P1 TSL 2 BASIC4.24□□□□□ -1.73
CLDN2P57739 AC011377.1-201ENST00000517708 275 ntTSL 3 BASIC4.24□□□□□ -1.73
CLDN2P57739 AP002428.1-201ENST00000527345 380 ntTSL 3 BASIC4.24□□□□□ -1.73
CLDN2P57739 AL356215.1-201ENST00000528366 1102 ntTSL 2 BASIC4.24□□□□□ -1.73
CLDN2P57739 SNHG1-208ENST00000538266 347 ntTSL 3 BASIC4.24□□□□□ -1.73
CLDN2P57739 SNHG1-218ENST00000541615 748 ntTSL 5 BASIC4.24□□□□□ -1.73
CLDN2P57739 AP003170.4-201ENST00000543486 586 ntTSL 3 BASIC4.24□□□□□ -1.73
CLDN2P57739 MRPL42-203ENST00000547098 701 ntTSL 3 BASIC4.24□□□□□ -1.73
CLDN2P57739 AC090502.2-201ENST00000549267 280 ntBASIC4.24□□□□□ -1.73
CLDN2P57739 LSM6P2-201ENST00000552208 177 ntBASIC4.24□□□□□ -1.73
CLDN2P57739 AC128707.1-201ENST00000552230 494 ntTSL 3 BASIC4.24□□□□□ -1.73
CLDN2P57739 AL389895.1-201ENST00000554127 252 ntBASIC4.24□□□□□ -1.73
CLDN2P57739 AL355076.2-201ENST00000555736 544 ntTSL 5 BASIC4.24□□□□□ -1.73
CLDN2P57739 AL035071.2-201ENST00000565572 459 ntTSL 3 BASIC4.24□□□□□ -1.73
CLDN2P57739 AC130371.1-204ENST00000576197 401 ntTSL 3 BASIC4.24□□□□□ -1.73
CLDN2P57739 AC004987.4-201ENST00000603383 338 ntBASIC4.24□□□□□ -1.73
CLDN2P57739 HSPE1P14-201ENST00000605812 302 ntBASIC4.24□□□□□ -1.73
CLDN2P57739 MIR6867-201ENST00000610636 67 ntBASIC4.24□□□□□ -1.73
CLDN2P57739 AC092650.2-201ENST00000619984 902 ntBASIC4.24□□□□□ -1.73
CLDN2P57739 AP000676.3-201ENST00000623299 569 ntBASIC4.24□□□□□ -1.73
CLDN2P57739 AC079248.2-201ENST00000623779 326 ntBASIC4.24□□□□□ -1.73
CLDN2P57739 AC026422.1-201ENST00000623961 452 ntBASIC4.24□□□□□ -1.73
CLDN2P57739 AC007671.2-201ENST00000637344 619 ntBASIC4.24□□□□□ -1.73
CLDN2P57739 USP29-202ENST00000598197 3284 ntAPPRIS P1 BASIC4.24□□□□□ -1.73
CLDN2P57739 SCN1A-202ENST00000375405 8097 ntAPPRIS P3 TSL 5 BASIC4.24□□□□□ -1.73
CLDN2P57739 ZNF645-201ENST00000323684 1519 ntAPPRIS P1 BASIC4.24□□□□□ -1.73
CLDN2P57739 MS4A1-202ENST00000389939 3372 ntAPPRIS P1 TSL 1 (best) BASIC4.24□□□□□ -1.73
CLDN2P57739 KCNJ13-201ENST00000233826 2950 ntAPPRIS P1 TSL 1 (best) BASIC4.24□□□□□ -1.73
CLDN2P57739 AP000526.1-201ENST00000603308 1388 ntBASIC4.24□□□□□ -1.73
CLDN2P57739 SCN1A-210ENST00000635776 10107 ntTSL 5 BASIC4.24□□□□□ -1.73
CLDN2P57739 AC139713.2-215ENST00000641428 5037 ntBASIC4.24□□□□□ -1.73
CLDN2P57739 CHD9-221ENST00000615216 10603 ntTSL 5 BASIC4.24□□□□□ -1.73
CLDN2P57739 FBXL13-207ENST00000455112 2274 ntTSL 1 (best) BASIC4.24□□□□□ -1.73
CLDN2P57739 OBSCN-204ENST00000366707 26772 ntAPPRIS P1 TSL 5 BASIC4.24□□□□□ -1.73
CLDN2P57739 DDR2-202ENST00000367922 10160 ntAPPRIS P1 TSL 1 (best) BASIC4.23□□□□□ -1.73
CLDN2P57739 MAPK10-304ENST00000641341 3984 ntBASIC4.23□□□□□ -1.73
CLDN2P57739 RNMT-203ENST00000543302 1849 ntAPPRIS P1 TSL 1 (best) BASIC4.23□□□□□ -1.73
CLDN2P57739 CLCA1-201ENST00000234701 3310 ntAPPRIS P1 TSL 1 (best) BASIC4.23□□□□□ -1.73
CLDN2P57739 PPP1R9A-205ENST00000424654 4058 ntTSL 5 BASIC4.23□□□□□ -1.73
CLDN2P57739 LINC01847-201ENST00000522627 5607 ntTSL 1 (best) BASIC4.23□□□□□ -1.73
CLDN2P57739 TPRG1-201ENST00000345063 5479 ntAPPRIS P1 TSL 1 (best) BASIC4.23□□□□□ -1.73
CLDN2P57739 KIF23-206ENST00000558585 2296 ntTSL 2 BASIC4.23□□□□□ -1.73
CLDN2P57739 CRISP1-204ENST00000507853 1793 ntTSL 1 (best) BASIC4.23□□□□□ -1.73
CLDN2P57739 DNAJC9-AS1-204ENST00000440197 2865 ntTSL 1 (best) BASIC4.23□□□□□ -1.73
CLDN2P57739 OR13C4-201ENST00000277216 957 ntAPPRIS P1 BASIC4.23□□□□□ -1.73
CLDN2P57739 STARD6-201ENST00000307844 663 ntAPPRIS P1 TSL 1 (best) BASIC4.23□□□□□ -1.73
CLDN2P57739 RNU4-40P-201ENST00000364351 143 ntBASIC4.23□□□□□ -1.73
CLDN2P57739 RNU6-1200P-201ENST00000384162 107 ntBASIC4.23□□□□□ -1.73
CLDN2P57739 AL450338.1-201ENST00000407987 512 ntBASIC4.23□□□□□ -1.73
CLDN2P57739 MIR1284-201ENST00000408337 120 ntBASIC4.23□□□□□ -1.73
CLDN2P57739 RNA5SP296-201ENST00000410523 111 ntBASIC4.23□□□□□ -1.73
CLDN2P57739 RN7SKP167-201ENST00000411047 285 ntBASIC4.23□□□□□ -1.73
CLDN2P57739 SNORA74C-2-201ENST00000411179 201 ntBASIC4.23□□□□□ -1.73
CLDN2P57739 EIF4A1P3-201ENST00000411521 244 ntBASIC4.23□□□□□ -1.73
CLDN2P57739 AL162394.1-201ENST00000413271 419 ntTSL 2 BASIC4.23□□□□□ -1.73
CLDN2P57739 TRBV24OR9-2-201ENST00000416632 435 ntBASIC4.23□□□□□ -1.73
CLDN2P57739 CDC27P1-201ENST00000445384 715 ntBASIC4.23□□□□□ -1.73
CLDN2P57739 AF127577.5-201ENST00000449746 446 ntTSL 3 BASIC4.23□□□□□ -1.73
CLDN2P57739 RPL18AP17-201ENST00000455326 198 ntBASIC4.23□□□□□ -1.73
CLDN2P57739 LMOD2-201ENST00000456238 918 ntTSL 1 (best) BASIC4.23□□□□□ -1.73
CLDN2P57739 RPS20P21-201ENST00000466859 343 ntBASIC4.23□□□□□ -1.73
Retrieved 100 of 98,524 protein–RNA pairs in 76.5 ms