Protein–RNA interactions for Protein: P53675

CLTCL1, Clathrin heavy chain 2, humanhuman

Predictions only

Length 1,640 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLTCL1P53675 AC008505.1-204ENST00000637363 2714 ntTSL 5 BASIC4.23□□□□□ -1.73
CLTCL1P53675 DENND2C-203ENST00000393277 4730 ntTSL 5 BASIC4.22□□□□□ -1.73
CLTCL1P53675 KNTC1-201ENST00000333479 6975 ntAPPRIS P1 TSL 1 (best) BASIC4.22□□□□□ -1.73
CLTCL1P53675 GYPA-202ENST00000360771 2659 ntAPPRIS P3 TSL 1 (best) BASIC4.22□□□□□ -1.73
CLTCL1P53675 RN7SKP285-201ENST00000410137 318 ntBASIC4.22□□□□□ -1.73
CLTCL1P53675 RNA5SP293-201ENST00000410527 113 ntBASIC4.22□□□□□ -1.73
CLTCL1P53675 AC108681.1-202ENST00000417384 589 ntTSL 4 BASIC4.22□□□□□ -1.73
CLTCL1P53675 AL929288.1-201ENST00000426262 746 ntTSL 3 BASIC4.22□□□□□ -1.73
CLTCL1P53675 PTP4A1P3-201ENST00000433661 420 ntBASIC4.22□□□□□ -1.73
CLTCL1P53675 RPL7P59-201ENST00000447700 943 ntBASIC4.22□□□□□ -1.73
CLTCL1P53675 RPS17P11-201ENST00000474297 293 ntBASIC4.22□□□□□ -1.73
CLTCL1P53675 LINC01416-201ENST00000563553 2310 ntTSL 1 (best) BASIC4.22□□□□□ -1.73
CLTCL1P53675 ZMYM1-210ENST00000611874 4466 ntAPPRIS P1 TSL 2 BASIC4.22□□□□□ -1.73
CLTCL1P53675 AL049555.1-201ENST00000562834 1933 ntBASIC4.22□□□□□ -1.73
CLTCL1P53675 IKZF2-213ENST00000457361 9350 ntTSL 5 BASIC4.21□□□□□ -1.73
CLTCL1P53675 NUDCD1-202ENST00000427660 2098 ntTSL 1 (best) BASIC4.21□□□□□ -1.73
CLTCL1P53675 RNU1-75P-201ENST00000347264 129 ntBASIC4.21□□□□□ -1.73
CLTCL1P53675 SNORD56.3-201ENST00000363507 71 ntBASIC4.21□□□□□ -1.73
CLTCL1P53675 RNU1-87P-201ENST00000363727 170 ntBASIC4.21□□□□□ -1.73
CLTCL1P53675 AC022018.1-201ENST00000430685 241 ntBASIC4.21□□□□□ -1.73
CLTCL1P53675 AC010890.1-202ENST00000432414 535 ntTSL 3 BASIC4.21□□□□□ -1.73
CLTCL1P53675 HMGB3P6-201ENST00000444896 598 ntBASIC4.21□□□□□ -1.73
CLTCL1P53675 AL589684.1-201ENST00000445974 507 ntTSL 3 BASIC4.21□□□□□ -1.73
CLTCL1P53675 RPL7L1P1-201ENST00000448259 785 ntBASIC4.21□□□□□ -1.73
CLTCL1P53675 AC233982.1-201ENST00000451247 436 ntBASIC4.21□□□□□ -1.73
CLTCL1P53675 AC106872.2-201ENST00000494303 480 ntBASIC4.21□□□□□ -1.73
CLTCL1P53675 RFPL4AP3-201ENST00000515267 345 ntBASIC4.21□□□□□ -1.73
CLTCL1P53675 AL160237.1-201ENST00000554526 572 ntTSL 4 BASIC4.21□□□□□ -1.73
CLTCL1P53675 MIR4644-201ENST00000579929 84 ntBASIC4.21□□□□□ -1.73
CLTCL1P53675 AL590235.2-201ENST00000602641 632 ntTSL 5 BASIC4.21□□□□□ -1.73
CLTCL1P53675 UTRN-204ENST00000367545 12339 ntAPPRIS P1 TSL 5 BASIC4.21□□□□□ -1.73
CLTCL1P53675 SELENOI-201ENST00000260585 8101 ntAPPRIS P2 TSL 1 (best) BASIC4.21□□□□□ -1.74
CLTCL1P53675 LINC00484-204ENST00000439438 454 ntTSL 3 BASIC4.21□□□□□ -1.74
CLTCL1P53675 RPL12P22-201ENST00000519073 490 ntBASIC4.21□□□□□ -1.74
CLTCL1P53675 AL512310.1-201ENST00000548639 172 ntBASIC4.21□□□□□ -1.74
CLTCL1P53675 SLC12A1-210ENST00000561031 735 ntTSL 2 BASIC4.21□□□□□ -1.74
CLTCL1P53675 MIR5047-201ENST00000579212 100 ntBASIC4.21□□□□□ -1.74
CLTCL1P53675 LINC01539-206ENST00000593282 678 ntTSL 4 BASIC4.21□□□□□ -1.74
CLTCL1P53675 OR2AS2P-201ENST00000606902 342 ntBASIC4.21□□□□□ -1.74
CLTCL1P53675 OR5R1-201ENST00000623286 975 ntAPPRIS P1 BASIC4.21□□□□□ -1.74
CLTCL1P53675 ORC4-201ENST00000264169 6598 ntAPPRIS P1 TSL 5 BASIC4.21□□□□□ -1.74
CLTCL1P53675 ZMYM1-203ENST00000373330 4203 ntAPPRIS P1 TSL 1 (best) BASIC4.21□□□□□ -1.74
CLTCL1P53675 C8orf22-201ENST00000303202 1499 ntTSL 1 (best) BASIC4.21□□□□□ -1.74
CLTCL1P53675 EPS8-209ENST00000542903 1858 ntTSL 2 BASIC4.2□□□□□ -1.74
CLTCL1P53675 KCNMB2-210ENST00000617329 2214 ntTSL 2 BASIC4.2□□□□□ -1.74
CLTCL1P53675 ABCA12-202ENST00000389661 7005 ntTSL 1 (best) BASIC4.2□□□□□ -1.74
CLTCL1P53675 ADGRG4-203ENST00000394143 9931 ntAPPRIS P2 TSL 1 (best) BASIC4.2□□□□□ -1.74
CLTCL1P53675 ERBIN-201ENST00000284037 8647 ntTSL 1 (best) BASIC4.2□□□□□ -1.74
CLTCL1P53675 SPANXN4-201ENST00000370504 560 ntAPPRIS ALT2 TSL 5 BASIC4.2□□□□□ -1.74
CLTCL1P53675 OR6C1-201ENST00000379668 1064 ntAPPRIS P1 BASIC4.2□□□□□ -1.74
CLTCL1P53675 RN7SKP60-201ENST00000516985 239 ntBASIC4.2□□□□□ -1.74
CLTCL1P53675 AL356022.1-201ENST00000557465 483 ntTSL 5 BASIC4.2□□□□□ -1.74
CLTCL1P53675 MIR3945-201ENST00000581853 98 ntBASIC4.2□□□□□ -1.74
CLTCL1P53675 AC008703.1-201ENST00000637629 1174 ntTSL 5 BASIC4.2□□□□□ -1.74
CLTCL1P53675 ATF7IP2-202ENST00000356427 3463 ntAPPRIS P1 TSL 1 (best) BASIC4.2□□□□□ -1.74
CLTCL1P53675 VPS13C-203ENST00000395896 14579 ntAPPRIS ALT2 TSL 1 (best) BASIC4.2□□□□□ -1.74
CLTCL1P53675 SCN3A-209ENST00000639244 8854 ntTSL 5 BASIC4.2□□□□□ -1.74
CLTCL1P53675 CEP97-201ENST00000341893 8361 ntAPPRIS P3 TSL 1 (best) BASIC4.19□□□□□ -1.74
CLTCL1P53675 STEAP2-205ENST00000394629 2261 ntTSL 1 (best) BASIC4.19□□□□□ -1.74
CLTCL1P53675 GLIPR1L1-201ENST00000312442 1132 ntAPPRIS P3 TSL 1 (best) BASIC4.19□□□□□ -1.74
CLTCL1P53675 RNU6-859P-201ENST00000362728 107 ntBASIC4.19□□□□□ -1.74
CLTCL1P53675 MIR34A-201ENST00000385130 110 ntBASIC4.19□□□□□ -1.74
CLTCL1P53675 AC068599.1-201ENST00000422558 567 ntTSL 4 BASIC4.19□□□□□ -1.74
CLTCL1P53675 AC019097.1-201ENST00000424783 735 ntBASIC4.19□□□□□ -1.74
CLTCL1P53675 AC087499.2-201ENST00000432861 149 ntBASIC4.19□□□□□ -1.74
CLTCL1P53675 RPL23AP22-201ENST00000437556 453 ntBASIC4.19□□□□□ -1.74
CLTCL1P53675 AC024084.1-201ENST00000440744 455 ntTSL 5 BASIC4.19□□□□□ -1.74
CLTCL1P53675 AC104781.1-201ENST00000449838 397 ntTSL 3 BASIC4.19□□□□□ -1.74
CLTCL1P53675 CFAP44-AS1-201ENST00000473329 396 ntTSL 2 BASIC4.19□□□□□ -1.74
CLTCL1P53675 ST13P14-201ENST00000474095 734 ntBASIC4.19□□□□□ -1.74
CLTCL1P53675 AC010445.1-201ENST00000507674 440 ntTSL 5 BASIC4.19□□□□□ -1.74
CLTCL1P53675 LINC02492-204ENST00000515660 584 ntTSL 2 BASIC4.19□□□□□ -1.74
CLTCL1P53675 AC024610.1-201ENST00000582685 323 ntTSL 3 BASIC4.19□□□□□ -1.74
CLTCL1P53675 AL136360.1-201ENST00000503377 1900 ntBASIC4.19□□□□□ -1.74
CLTCL1P53675 PLS1-201ENST00000337777 3755 ntAPPRIS P1 TSL 1 (best) BASIC4.19□□□□□ -1.74
CLTCL1P53675 LRFN5-204ENST00000554171 4253 ntAPPRIS ALT2 TSL 1 (best) BASIC4.19□□□□□ -1.74
CLTCL1P53675 GABRB2-203ENST00000393959 7191 ntTSL 1 (best) BASIC4.18□□□□□ -1.74
CLTCL1P53675 PARD3-204ENST00000374768 799 ntTSL 3 BASIC4.18□□□□□ -1.74
CLTCL1P53675 RPS4XP8-201ENST00000402039 771 ntBASIC4.18□□□□□ -1.74
CLTCL1P53675 AC010468.1-201ENST00000461022 817 ntBASIC4.18□□□□□ -1.74
CLTCL1P53675 AC090541.1-201ENST00000519803 467 ntTSL 3 BASIC4.18□□□□□ -1.74
CLTCL1P53675 AC027701.1-202ENST00000520988 459 ntTSL 3 BASIC4.18□□□□□ -1.74
CLTCL1P53675 FOPNL-205ENST00000573429 646 ntTSL 3 BASIC4.18□□□□□ -1.74
CLTCL1P53675 HSPE1-MOB4-201ENST00000604458 890 ntAPPRIS P1 TSL 3 BASIC4.18□□□□□ -1.74
CLTCL1P53675 AC004832.5-201ENST00000608677 401 ntBASIC4.18□□□□□ -1.74
CLTCL1P53675 AC231759.1-201ENST00000616455 597 ntBASIC4.18□□□□□ -1.74
CLTCL1P53675 R3HDM1-220ENST00000628915 4325 ntTSL 5 BASIC4.18□□□□□ -1.74
CLTCL1P53675 SUGT1-201ENST00000310528 14131 ntAPPRIS P3 TSL 1 (best) BASIC4.18□□□□□ -1.74
CLTCL1P53675 LINC00317-201ENST00000419069 612 ntTSL 1 (best) BASIC4.17□□□□□ -1.74
CLTCL1P53675 BBS9-205ENST00000425508 1252 ntTSL 1 (best) BASIC4.17□□□□□ -1.74
CLTCL1P53675 AL080316.1-201ENST00000432438 499 ntTSL 2 BASIC4.17□□□□□ -1.74
CLTCL1P53675 RPL7L1P13-201ENST00000511702 739 ntBASIC4.17□□□□□ -1.74
CLTCL1P53675 AL133371.2-201ENST00000556624 294 ntTSL 3 BASIC4.17□□□□□ -1.74
CLTCL1P53675 AL359535.1-201ENST00000612100 1087 ntBASIC4.17□□□□□ -1.74
CLTCL1P53675 ASNSP1-201ENST00000518311 1939 ntBASIC4.17□□□□□ -1.74
CLTCL1P53675 CYSLTR2-201ENST00000282018 4672 ntAPPRIS P1 BASIC4.17□□□□□ -1.74
CLTCL1P53675 ZNF680-202ENST00000447137 2159 ntTSL 2 BASIC4.17□□□□□ -1.74
CLTCL1P53675 MARCH7-202ENST00000409175 2402 ntAPPRIS P1 TSL 2 BASIC4.17□□□□□ -1.74
CLTCL1P53675 AL359693.1-201ENST00000614959 2407 ntBASIC4.17□□□□□ -1.74
CLTCL1P53675 AC006960.1-201ENST00000419980 153 ntBASIC4.17□□□□□ -1.74
Retrieved 100 of 98,524 protein–RNA pairs in 104.3 ms