Protein–RNA interactions for Protein: P49639

HOXA1, Homeobox protein Hox-A1, humanhuman

Predicted RBP Predictions only

Length 335 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXA1P49639 MTND2P28-201ENST00000457540 1044 ntBASIC3.79□□□□□ -1.8
HOXA1P49639 RPL7L1P8-201ENST00000469911 741 ntBASIC3.79□□□□□ -1.8
HOXA1P49639 AC007537.2-201ENST00000472093 511 ntBASIC3.79□□□□□ -1.8
HOXA1P49639 COPS8P2-201ENST00000473228 627 ntBASIC3.79□□□□□ -1.8
HOXA1P49639 UBA52P7-201ENST00000486088 380 ntBASIC3.79□□□□□ -1.8
HOXA1P49639 AC072052.1-201ENST00000496556 306 ntBASIC3.79□□□□□ -1.8
HOXA1P49639 AL139147.1-201ENST00000502413 1156 ntTSL 2 BASIC3.79□□□□□ -1.8
HOXA1P49639 HIGD1AP14-201ENST00000507617 282 ntBASIC3.79□□□□□ -1.8
HOXA1P49639 AC004980.4-201ENST00000513375 203 ntBASIC3.79□□□□□ -1.8
HOXA1P49639 AC093305.1-201ENST00000514105 522 ntTSL 5 BASIC3.79□□□□□ -1.8
HOXA1P49639 RNU6-488P-201ENST00000515918 99 ntBASIC3.79□□□□□ -1.8
HOXA1P49639 TBCA-206ENST00000518338 551 ntTSL 2 BASIC3.79□□□□□ -1.8
HOXA1P49639 SMARCE1P4-201ENST00000523647 241 ntBASIC3.79□□□□□ -1.8
HOXA1P49639 RGS5-219ENST00000528019 512 ntTSL 4 BASIC3.79□□□□□ -1.8
HOXA1P49639 AC239802.1-201ENST00000531288 406 ntTSL 5 BASIC3.79□□□□□ -1.8
HOXA1P49639 AC084838.1-201ENST00000532973 312 ntTSL 3 BASIC3.79□□□□□ -1.8
HOXA1P49639 LINC02423-202ENST00000542577 460 ntTSL 3 BASIC3.79□□□□□ -1.8
HOXA1P49639 OR7K1P-201ENST00000546439 926 ntBASIC3.79□□□□□ -1.8
HOXA1P49639 AC133555.2-201ENST00000550213 292 ntBASIC3.79□□□□□ -1.8
HOXA1P49639 AC023161.2-201ENST00000551218 780 ntBASIC3.79□□□□□ -1.8
HOXA1P49639 NOVA1-AS1-203ENST00000552101 468 ntTSL 3 BASIC3.79□□□□□ -1.8
HOXA1P49639 AC007954.1-201ENST00000554198 494 ntBASIC3.79□□□□□ -1.8
HOXA1P49639 MED6-207ENST00000554963 975 ntAPPRIS ALT1 TSL 5 BASIC3.79□□□□□ -1.8
HOXA1P49639 PSMB7P1-201ENST00000556349 514 ntBASIC3.79□□□□□ -1.8
HOXA1P49639 TIMM9-209ENST00000556367 572 ntTSL 2 BASIC3.79□□□□□ -1.8
HOXA1P49639 AC084757.1-201ENST00000559987 490 ntBASIC3.79□□□□□ -1.8
HOXA1P49639 AC124068.1-201ENST00000563131 678 ntBASIC3.79□□□□□ -1.8
HOXA1P49639 ACTR3BP3-201ENST00000565577 979 ntBASIC3.79□□□□□ -1.8
HOXA1P49639 AC002094.2-201ENST00000577850 1121 ntTSL 5 BASIC3.79□□□□□ -1.8
HOXA1P49639 AC119751.7-201ENST00000600494 245 ntBASIC3.79□□□□□ -1.8
HOXA1P49639 MIR99AHG-211ENST00000602323 475 ntTSL 5 BASIC3.79□□□□□ -1.8
HOXA1P49639 AC024560.3-201ENST00000608482 349 ntBASIC3.79□□□□□ -1.8
HOXA1P49639 AC092653.1-201ENST00000608509 531 ntBASIC3.79□□□□□ -1.8
HOXA1P49639 AC093799.2-201ENST00000610062 578 ntBASIC3.79□□□□□ -1.8
HOXA1P49639 IL33-205ENST00000611532 757 ntTSL 1 (best) BASIC3.79□□□□□ -1.8
HOXA1P49639 MIR6826-201ENST00000617808 98 ntBASIC3.79□□□□□ -1.8
HOXA1P49639 ZFAT-AS1_1.1-201ENST00000620907 79 ntBASIC3.79□□□□□ -1.8
HOXA1P49639 LDHA-225ENST00000625635 141 ntTSL 5 BASIC3.79□□□□□ -1.8
HOXA1P49639 SNAP23-222ENST00000626061 237 ntTSL 5 BASIC3.79□□□□□ -1.8
HOXA1P49639 SNAP23-223ENST00000627440 210 ntTSL 5 BASIC3.79□□□□□ -1.8
HOXA1P49639 FCHO2-207ENST00000512348 2700 ntTSL 2 BASIC3.79□□□□□ -1.8
HOXA1P49639 MTCO1P14-201ENST00000441695 1559 ntBASIC3.79□□□□□ -1.8
HOXA1P49639 ZNF345-214ENST00000612719 2938 ntAPPRIS P1 TSL 4 BASIC3.79□□□□□ -1.8
HOXA1P49639 MTCO1P11-201ENST00000429111 1528 ntBASIC3.79□□□□□ -1.8
HOXA1P49639 ZNF678-202ENST00000397097 8212 ntAPPRIS P1 TSL 1 (best) BASIC3.79□□□□□ -1.8
HOXA1P49639 RNMT-203ENST00000543302 1849 ntAPPRIS P1 TSL 1 (best) BASIC3.79□□□□□ -1.8
HOXA1P49639 DOCK7-219ENST00000635253 6423 ntAPPRIS ALT2 TSL 5 BASIC3.79□□□□□ -1.8
HOXA1P49639 NCLP2-201ENST00000416078 1462 ntBASIC3.79□□□□□ -1.8
HOXA1P49639 AC114546.3-201ENST00000623582 1734 ntBASIC3.78□□□□□ -1.8
HOXA1P49639 EFHC1-205ENST00000538167 5308 ntTSL 5 BASIC3.78□□□□□ -1.8
HOXA1P49639 UGT2B10-201ENST00000265403 1931 ntAPPRIS P1 TSL 1 (best) BASIC3.78□□□□□ -1.8
HOXA1P49639 PLCZ1-206ENST00000538330 1612 ntTSL 2 BASIC3.78□□□□□ -1.8
HOXA1P49639 ADGRL2-210ENST00000370728 6302 ntAPPRIS ALT2 TSL 5 BASIC3.78□□□□□ -1.8
HOXA1P49639 R3HDM1-203ENST00000409606 3673 ntAPPRIS ALT1 TSL 2 BASIC3.78□□□□□ -1.8
HOXA1P49639 ADAM7-201ENST00000175238 3367 ntAPPRIS P2 TSL 1 (best) BASIC3.78□□□□□ -1.8
HOXA1P49639 SON-204ENST00000381692 2463 ntTSL 1 (best) BASIC3.78□□□□□ -1.8
HOXA1P49639 ZNF732-202ENST00000619749 2179 ntAPPRIS ALT2 TSL 2 BASIC3.78□□□□□ -1.8
HOXA1P49639 FCHSD2-205ENST00000409853 1867 ntTSL 1 (best) BASIC3.78□□□□□ -1.8
HOXA1P49639 DBF4P1-201ENST00000412976 1892 ntBASIC3.78□□□□□ -1.8
HOXA1P49639 OR2D2-201ENST00000299459 1110 ntAPPRIS P1 BASIC3.78□□□□□ -1.8
HOXA1P49639 OR52E6-201ENST00000329322 970 ntAPPRIS P1 BASIC3.78□□□□□ -1.8
HOXA1P49639 SNRPEP3-201ENST00000338402 276 ntBASIC3.78□□□□□ -1.8
HOXA1P49639 RNU6-216P-201ENST00000363282 104 ntBASIC3.78□□□□□ -1.8
HOXA1P49639 RNU5A-2P-201ENST00000384337 116 ntBASIC3.78□□□□□ -1.8
HOXA1P49639 RNU6-146P-201ENST00000384602 108 ntBASIC3.78□□□□□ -1.8
HOXA1P49639 SNRPEP2-201ENST00000397592 279 ntBASIC3.78□□□□□ -1.8
HOXA1P49639 HNRNPDP2-201ENST00000406475 478 ntBASIC3.78□□□□□ -1.8
HOXA1P49639 SNX10-204ENST00000409838 944 ntTSL 1 (best) BASIC3.78□□□□□ -1.8
HOXA1P49639 AL024509.3-201ENST00000413898 745 ntTSL 1 (best) BASIC3.78□□□□□ -1.8
HOXA1P49639 AC062016.2-201ENST00000420950 676 ntBASIC3.78□□□□□ -1.8
HOXA1P49639 AC079355.1-201ENST00000421770 223 ntBASIC3.78□□□□□ -1.8
HOXA1P49639 VDAC1P6-201ENST00000430062 855 ntBASIC3.78□□□□□ -1.8
HOXA1P49639 AL590103.1-201ENST00000434488 307 ntBASIC3.78□□□□□ -1.8
HOXA1P49639 PRPF38AP2-201ENST00000438179 851 ntBASIC3.78□□□□□ -1.8
HOXA1P49639 KCND3-IT1-201ENST00000439736 376 ntTSL 3 BASIC3.78□□□□□ -1.8
HOXA1P49639 AC009987.1-201ENST00000446888 806 ntTSL 5 BASIC3.78□□□□□ -1.8
HOXA1P49639 SLC31A1P1-201ENST00000451221 567 ntBASIC3.78□□□□□ -1.8
HOXA1P49639 VN1R32P-201ENST00000452234 905 ntBASIC3.78□□□□□ -1.8
HOXA1P49639 AP000472.1-201ENST00000452500 530 ntTSL 2 BASIC3.78□□□□□ -1.8
HOXA1P49639 LINC00393-202ENST00000452852 485 ntTSL 3 BASIC3.78□□□□□ -1.8
HOXA1P49639 RNU7-170P-201ENST00000459303 61 ntBASIC3.78□□□□□ -1.8
HOXA1P49639 RPL7P1-201ENST00000468161 747 ntBASIC3.78□□□□□ -1.8
HOXA1P49639 RPL7P9-201ENST00000468715 747 ntBASIC3.78□□□□□ -1.8
HOXA1P49639 AC008897.1-201ENST00000494006 347 ntBASIC3.78□□□□□ -1.8
HOXA1P49639 AC025164.1-201ENST00000496249 478 ntBASIC3.78□□□□□ -1.8
HOXA1P49639 AC108078.3-201ENST00000502633 489 ntBASIC3.78□□□□□ -1.8
HOXA1P49639 AC140172.1-201ENST00000502928 141 ntBASIC3.78□□□□□ -1.8
HOXA1P49639 FTH1P24-201ENST00000503502 462 ntBASIC3.78□□□□□ -1.8
HOXA1P49639 EIF4E-208ENST00000505992 898 ntTSL 5 BASIC3.78□□□□□ -1.8
HOXA1P49639 THAP6-209ENST00000507556 1134 ntTSL 2 BASIC3.78□□□□□ -1.8
HOXA1P49639 RNU1-6P-201ENST00000516290 144 ntBASIC3.78□□□□□ -1.8
HOXA1P49639 LINC00535-202ENST00000517785 264 ntTSL 3 BASIC3.78□□□□□ -1.8
HOXA1P49639 SOD1P3-201ENST00000518682 454 ntBASIC3.78□□□□□ -1.8
HOXA1P49639 AC140847.1-201ENST00000538025 534 ntTSL 4 BASIC3.78□□□□□ -1.8
HOXA1P49639 AC087260.1-201ENST00000546118 401 ntTSL 5 BASIC3.78□□□□□ -1.8
HOXA1P49639 MRPL42-203ENST00000547098 701 ntTSL 3 BASIC3.78□□□□□ -1.8
HOXA1P49639 HAUS8P1-201ENST00000549005 542 ntBASIC3.78□□□□□ -1.8
HOXA1P49639 AC025263.2-201ENST00000550437 548 ntAPPRIS P1 TSL 5 BASIC3.78□□□□□ -1.8
HOXA1P49639 AC093012.1-201ENST00000552999 446 ntTSL 3 BASIC3.78□□□□□ -1.8
HOXA1P49639 JKAMP-212ENST00000556985 592 ntTSL 2 BASIC3.78□□□□□ -1.8
Retrieved 100 of 98,524 protein–RNA pairs in 127.9 ms