Protein–RNA interactions for Protein: Q9UPN3

MACF1, Microtubule-actin cross-linking factor 1, isoforms 1/2/3/5, humanhuman

Known RBP Predictions only

Length 7,388 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MACF1Q9UPN3 AC023161.2-201ENST00000551218 780 ntBASIC1.32□□□□□ -2.2
MACF1Q9UPN3 AL513314.2-204ENST00000619187 459 ntTSL 5 BASIC1.32□□□□□ -2.2
MACF1Q9UPN3 FGD4-211ENST00000531134 2924 ntTSL 2 BASIC1.32□□□□□ -2.2
MACF1Q9UPN3 AC012618.3-201ENST00000415793 2042 ntTSL 5 BASIC1.32□□□□□ -2.2
MACF1Q9UPN3 LINC01422-201ENST00000434868 6043 ntTSL 1 (best) BASIC1.32□□□□□ -2.2
MACF1Q9UPN3 KCNRG-201ENST00000312942 1527 ntAPPRIS P1 TSL 1 (best) BASIC1.32□□□□□ -2.2
MACF1Q9UPN3 PSG1-205ENST00000595124 1692 ntTSL 2 BASIC1.32□□□□□ -2.2
MACF1Q9UPN3 CFH-206ENST00000630130 1658 ntTSL 1 (best) BASIC1.32□□□□□ -2.2
MACF1Q9UPN3 ARID2-202ENST00000422737 5481 ntTSL 1 (best) BASIC1.32□□□□□ -2.2
MACF1Q9UPN3 TRAV25-201ENST00000390454 403 ntAPPRIS P1 BASIC1.32□□□□□ -2.2
MACF1Q9UPN3 POLR1D-202ENST00000399696 668 ntAPPRIS ALT1 TSL 5 BASIC1.32□□□□□ -2.2
MACF1Q9UPN3 RNU4-53P-201ENST00000410828 140 ntBASIC1.32□□□□□ -2.2
MACF1Q9UPN3 NPM1P24-201ENST00000428039 894 ntBASIC1.32□□□□□ -2.2
MACF1Q9UPN3 AC025465.2-201ENST00000502809 608 ntTSL 2 BASIC1.32□□□□□ -2.2
MACF1Q9UPN3 AC011602.1-201ENST00000546484 331 ntBASIC1.32□□□□□ -2.2
MACF1Q9UPN3 AC005899.4-201ENST00000581915 514 ntTSL 4 BASIC1.32□□□□□ -2.2
MACF1Q9UPN3 LINC01539-206ENST00000593282 678 ntTSL 4 BASIC1.32□□□□□ -2.2
MACF1Q9UPN3 AC024603.1-201ENST00000597938 592 ntTSL 4 BASIC1.32□□□□□ -2.2
MACF1Q9UPN3 RDM1-219ENST00000615378 542 ntTSL 3 BASIC1.32□□□□□ -2.2
MACF1Q9UPN3 C3orf85-208ENST00000622536 925 ntAPPRIS P5 TSL 5 BASIC1.32□□□□□ -2.2
MACF1Q9UPN3 MLF1-203ENST00000392822 2157 ntTSL 5 BASIC1.32□□□□□ -2.2
MACF1Q9UPN3 MLH3-202ENST00000380968 7819 ntTSL 1 (best) BASIC1.31□□□□□ -2.2
MACF1Q9UPN3 AL450326.2-201ENST00000421913 1962 ntBASIC1.31□□□□□ -2.2
MACF1Q9UPN3 ORC4-201ENST00000264169 6598 ntAPPRIS P1 TSL 5 BASIC1.31□□□□□ -2.2
MACF1Q9UPN3 TMEM30A-202ENST00000370050 3775 ntTSL 1 (best) BASIC1.31□□□□□ -2.2
MACF1Q9UPN3 MAPK10-322ENST00000641485 4530 ntBASIC1.31□□□□□ -2.2
MACF1Q9UPN3 AC110079.2-201ENST00000629462 1512 ntTSL 1 (best) BASIC1.31□□□□□ -2.2
MACF1Q9UPN3 MYSM1-203ENST00000472487 7785 ntAPPRIS P1 TSL 1 (best) BASIC1.31□□□□□ -2.2
MACF1Q9UPN3 NUP155-202ENST00000381843 4200 ntTSL 1 (best) BASIC1.31□□□□□ -2.2
MACF1Q9UPN3 PHC3-203ENST00000467570 2595 ntTSL 2 BASIC1.31□□□□□ -2.2
MACF1Q9UPN3 ZCCHC10-202ENST00000355372 2160 ntAPPRIS ALT2 TSL 2 BASIC1.31□□□□□ -2.2
MACF1Q9UPN3 XIRP2-203ENST00000409195 12675 ntTSL 5 BASIC1.31□□□□□ -2.2
MACF1Q9UPN3 APOH-201ENST00000205948 1176 ntAPPRIS P1 TSL 1 (best) BASIC1.31□□□□□ -2.2
MACF1Q9UPN3 SNORA70E-201ENST00000384492 135 ntBASIC1.31□□□□□ -2.2
MACF1Q9UPN3 TFPI-204ENST00000409676 1119 ntTSL 1 (best) BASIC1.31□□□□□ -2.2
MACF1Q9UPN3 RN7SKP111-201ENST00000410349 271 ntBASIC1.31□□□□□ -2.2
MACF1Q9UPN3 RNU2-32P-201ENST00000411193 191 ntBASIC1.31□□□□□ -2.2
MACF1Q9UPN3 AC005518.1-201ENST00000448131 1116 ntTSL 2 BASIC1.31□□□□□ -2.2
MACF1Q9UPN3 IGKV1OR2-1-201ENST00000514060 354 ntBASIC1.31□□□□□ -2.2
MACF1Q9UPN3 RNA5SP220-201ENST00000516298 104 ntBASIC1.31□□□□□ -2.2
MACF1Q9UPN3 LINC01533-205ENST00000593056 607 ntTSL 3 BASIC1.31□□□□□ -2.2
MACF1Q9UPN3 CNTN5-207ENST00000527185 4303 ntTSL 1 (best) BASIC1.31□□□□□ -2.2
MACF1Q9UPN3 SV2B-202ENST00000394232 11279 ntAPPRIS P1 TSL 5 BASIC1.31□□□□□ -2.2
MACF1Q9UPN3 HELZ-207ENST00000580168 6279 ntAPPRIS P1 TSL 1 (best) BASIC1.31□□□□□ -2.2
MACF1Q9UPN3 MS4A1-202ENST00000389939 3372 ntAPPRIS P1 TSL 1 (best) BASIC1.31□□□□□ -2.2
MACF1Q9UPN3 SCN2A-215ENST00000637266 8610 ntAPPRIS ALT1 TSL 5 BASIC1.31□□□□□ -2.2
MACF1Q9UPN3 DNM3OS-201ENST00000417354 4358 ntTSL 4 BASIC1.31□□□□□ -2.2
MACF1Q9UPN3 AC003988.1-201ENST00000447198 578 ntTSL 5 BASIC1.31□□□□□ -2.2
MACF1Q9UPN3 CPSF6-207ENST00000551516 234 ntTSL 2 BASIC1.31□□□□□ -2.2
MACF1Q9UPN3 AP004372.1-201ENST00000604842 844 ntBASIC1.31□□□□□ -2.2
MACF1Q9UPN3 AL162574.2-201ENST00000614618 657 ntBASIC1.31□□□□□ -2.2
MACF1Q9UPN3 TMEM132B-201ENST00000299308 10906 ntAPPRIS P3 TSL 5 BASIC1.31□□□□□ -2.2
MACF1Q9UPN3 MLH1-212ENST00000455445 2296 ntTSL 2 BASIC1.31□□□□□ -2.2
MACF1Q9UPN3 MDN1-205ENST00000629399 17400 ntAPPRIS P1 TSL 1 (best) BASIC1.31□□□□□ -2.2
MACF1Q9UPN3 KTN1-202ENST00000395308 4134 ntAPPRIS ALT2 TSL 1 (best) BASIC1.31□□□□□ -2.2
MACF1Q9UPN3 SERPINI2-202ENST00000461846 1514 ntAPPRIS P1 TSL 1 (best) BASIC1.31□□□□□ -2.2
MACF1Q9UPN3 XPO4-202ENST00000400602 9884 ntAPPRIS ALT1 TSL 5 BASIC1.31□□□□□ -2.2
MACF1Q9UPN3 PRKACB-219ENST00000614872 4306 ntTSL 1 (best) BASIC1.31□□□□□ -2.2
MACF1Q9UPN3 TMEM68-218ENST00000617782 2477 ntAPPRIS P1 TSL 5 BASIC1.31□□□□□ -2.2
MACF1Q9UPN3 RNU6-342P-201ENST00000384521 104 ntBASIC1.31□□□□□ -2.2
MACF1Q9UPN3 AL583834.1-201ENST00000406943 343 ntBASIC1.31□□□□□ -2.2
MACF1Q9UPN3 AL157709.1-201ENST00000412695 424 ntTSL 3 BASIC1.31□□□□□ -2.2
MACF1Q9UPN3 LINC01603-201ENST00000517343 1134 ntTSL 2 BASIC1.31□□□□□ -2.2
MACF1Q9UPN3 AP003122.3-201ENST00000526316 255 ntBASIC1.31□□□□□ -2.2
MACF1Q9UPN3 RGS4-207ENST00000527809 817 ntTSL 4 BASIC1.31□□□□□ -2.2
MACF1Q9UPN3 AC008011.1-201ENST00000545989 227 ntBASIC1.31□□□□□ -2.2
MACF1Q9UPN3 RNF219-AS1-214ENST00000607862 6001 ntTSL 1 (best) BASIC1.31□□□□□ -2.2
MACF1Q9UPN3 SCFD1-207ENST00000544052 2058 ntTSL 2 BASIC1.31□□□□□ -2.2
MACF1Q9UPN3 AL355578.1-201ENST00000607405 1328 ntBASIC1.31□□□□□ -2.2
MACF1Q9UPN3 ATF7IP2-201ENST00000324570 3396 ntTSL 5 BASIC1.31□□□□□ -2.2
MACF1Q9UPN3 ZFX-203ENST00000379177 7558 ntAPPRIS P1 TSL 1 (best) BASIC1.31□□□□□ -2.2
MACF1Q9UPN3 ASPN-202ENST00000375544 2470 ntAPPRIS P1 TSL 1 (best) BASIC1.31□□□□□ -2.2
MACF1Q9UPN3 SNORA64-201ENST00000384674 134 ntBASIC1.31□□□□□ -2.2
MACF1Q9UPN3 REG1CP-203ENST00000434852 460 ntTSL 4 BASIC1.31□□□□□ -2.2
MACF1Q9UPN3 AC095032.1-201ENST00000444810 527 ntTSL 3 BASIC1.31□□□□□ -2.2
MACF1Q9UPN3 AC117522.2-201ENST00000510049 657 ntBASIC1.31□□□□□ -2.2
MACF1Q9UPN3 LINC02480-201ENST00000511875 612 ntTSL 2 BASIC1.31□□□□□ -2.2
MACF1Q9UPN3 RN7SKP283-201ENST00000517197 270 ntBASIC1.31□□□□□ -2.2
MACF1Q9UPN3 AC007001.1-201ENST00000590912 670 ntTSL 5 BASIC1.31□□□□□ -2.2
MACF1Q9UPN3 AC015922.4-201ENST00000612568 690 ntBASIC1.31□□□□□ -2.2
MACF1Q9UPN3 AC092608.2-201ENST00000624427 218 ntBASIC1.31□□□□□ -2.2
MACF1Q9UPN3 AC245100.2-201ENST00000454544 1679 ntBASIC1.31□□□□□ -2.2
MACF1Q9UPN3 LINC02431-201ENST00000503929 3601 ntTSL 1 (best) BASIC1.31□□□□□ -2.2
MACF1Q9UPN3 ZEB2-244ENST00000638007 9140 ntTSL 5 BASIC1.31□□□□□ -2.2
MACF1Q9UPN3 DTHD1-205ENST00000507598 2606 ntTSL 1 (best) BASIC1.31□□□□□ -2.2
MACF1Q9UPN3 ATF7IP2-202ENST00000356427 3463 ntAPPRIS P1 TSL 1 (best) BASIC1.31□□□□□ -2.2
MACF1Q9UPN3 ACADM-203ENST00000420607 1332 ntAPPRIS ALT1 TSL 1 (best) BASIC1.31□□□□□ -2.2
MACF1Q9UPN3 NAV1-201ENST00000367295 11645 ntTSL 1 (best) BASIC1.31□□□□□ -2.2
MACF1Q9UPN3 TMEM27-201ENST00000380342 1578 ntAPPRIS P1 TSL 1 (best) BASIC1.31□□□□□ -2.2
MACF1Q9UPN3 PPP1R9A-208ENST00000456331 10090 ntTSL 1 (best) BASIC1.31□□□□□ -2.2
MACF1Q9UPN3 OR56A3-203ENST00000641160 4438 ntAPPRIS P1 BASIC1.31□□□□□ -2.2
MACF1Q9UPN3 TRDN-206ENST00000628709 1661 ntAPPRIS ALT2 TSL 1 (best) BASIC1.31□□□□□ -2.2
MACF1Q9UPN3 OR8K3-203ENST00000641662 2438 ntAPPRIS P1 BASIC1.31□□□□□ -2.2
MACF1Q9UPN3 AL669831.5-220ENST00000412115 581 ntTSL 3 BASIC1.31□□□□□ -2.2
MACF1Q9UPN3 AC087499.2-201ENST00000432861 149 ntBASIC1.31□□□□□ -2.2
MACF1Q9UPN3 RPS4XP22-201ENST00000480755 780 ntBASIC1.31□□□□□ -2.2
MACF1Q9UPN3 MAPK10-253ENST00000641010 4072 ntBASIC1.31□□□□□ -2.2
MACF1Q9UPN3 HSPD1P14-201ENST00000432666 1618 ntBASIC1.3□□□□□ -2.2
MACF1Q9UPN3 ZMYM1-210ENST00000611874 4466 ntAPPRIS P1 TSL 2 BASIC1.3□□□□□ -2.2
MACF1Q9UPN3 TEX21P-201ENST00000447107 1476 ntBASIC1.3□□□□□ -2.2
Retrieved 100 of 98,524 protein–RNA pairs in 77.7 ms