Protein–RNA interactions for Protein: Q96RK1

CITED4, Cbp/p300-interacting transactivator 4, humanhuman

Predictions only

Length 184 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CITED4Q96RK1 AC018521.2-202ENST00000582142 473 ntTSL 2 BASIC5.55□□□□□ -1.52
CITED4Q96RK1 AC012588.1-201ENST00000583852 358 ntTSL 3 BASIC5.55□□□□□ -1.52
CITED4Q96RK1 AC119868.1-202ENST00000584741 347 ntTSL 2 BASIC5.55□□□□□ -1.52
CITED4Q96RK1 AC008521.1-201ENST00000587471 187 ntBASIC5.55□□□□□ -1.52
CITED4Q96RK1 AC025857.2-201ENST00000602711 238 ntBASIC5.55□□□□□ -1.52
CITED4Q96RK1 AL138889.2-201ENST00000603883 242 ntBASIC5.55□□□□□ -1.52
CITED4Q96RK1 AL121809.2-201ENST00000613169 341 ntBASIC5.55□□□□□ -1.52
CITED4Q96RK1 Six3os1_4.1-201ENST00000615706 324 ntBASIC5.55□□□□□ -1.52
CITED4Q96RK1 AL161457.2-201ENST00000629181 630 ntTSL 5 BASIC5.55□□□□□ -1.52
CITED4Q96RK1 LINC00158-201ENST00000332587 1476 ntTSL 1 (best) BASIC5.55□□□□□ -1.52
CITED4Q96RK1 LINC00598-206ENST00000615947 3541 ntTSL 4 BASIC5.55□□□□□ -1.52
CITED4Q96RK1 ZBED6-202ENST00000550078 12481 ntAPPRIS P1 TSL 1 (best) BASIC5.55□□□□□ -1.52
CITED4Q96RK1 CDC7-201ENST00000234626 3173 ntAPPRIS P1 TSL 1 (best) BASIC5.55□□□□□ -1.52
CITED4Q96RK1 AC121333.1-201ENST00000567488 2709 ntBASIC5.54□□□□□ -1.52
CITED4Q96RK1 TIPARP-207ENST00000542783 3681 ntAPPRIS P1 TSL 1 (best) BASIC5.54□□□□□ -1.52
CITED4Q96RK1 RMDN2-204ENST00000406384 1932 ntAPPRIS P1 TSL 1 (best) BASIC5.54□□□□□ -1.52
CITED4Q96RK1 ZNF644-204ENST00000370440 5702 ntAPPRIS P1 TSL 5 BASIC5.54□□□□□ -1.52
CITED4Q96RK1 YPEL5-202ENST00000379519 2499 ntAPPRIS P1 TSL 2 BASIC5.54□□□□□ -1.52
CITED4Q96RK1 PTPRR-204ENST00000440835 2818 ntAPPRIS ALT2 TSL 1 (best) BASIC5.54□□□□□ -1.52
CITED4Q96RK1 AMY1B-201ENST00000330330 1862 ntAPPRIS P1 TSL 1 (best) BASIC5.54□□□□□ -1.52
CITED4Q96RK1 AC006484.1-201ENST00000435086 1884 ntBASIC5.54□□□□□ -1.52
CITED4Q96RK1 LINC01581-202ENST00000558874 3173 ntTSL 1 (best) BASIC5.54□□□□□ -1.52
CITED4Q96RK1 LINC01289-201ENST00000519550 3712 ntTSL 1 (best) BASIC5.54□□□□□ -1.52
CITED4Q96RK1 OR52H1-201ENST00000322653 1057 ntAPPRIS P1 BASIC5.54□□□□□ -1.52
CITED4Q96RK1 RNA5SP453-201ENST00000362503 119 ntBASIC5.54□□□□□ -1.52
CITED4Q96RK1 RNA5SP65-201ENST00000363166 119 ntBASIC5.54□□□□□ -1.52
CITED4Q96RK1 RNA5SP396-201ENST00000364834 120 ntBASIC5.54□□□□□ -1.52
CITED4Q96RK1 NDUFS5P1-201ENST00000405668 289 ntBASIC5.54□□□□□ -1.52
CITED4Q96RK1 RPL5P18-201ENST00000406671 891 ntBASIC5.54□□□□□ -1.52
CITED4Q96RK1 SNORA11D-201ENST00000408548 128 ntBASIC5.54□□□□□ -1.52
CITED4Q96RK1 SNORA11E-201ENST00000408778 128 ntBASIC5.54□□□□□ -1.52
CITED4Q96RK1 AL451060.1-203ENST00000431307 362 ntTSL 3 BASIC5.54□□□□□ -1.52
CITED4Q96RK1 CYCSP51-201ENST00000443545 318 ntBASIC5.54□□□□□ -1.52
CITED4Q96RK1 AL451074.4-201ENST00000447545 470 ntBASIC5.54□□□□□ -1.52
CITED4Q96RK1 LINC01952-202ENST00000450016 281 ntTSL 3 BASIC5.54□□□□□ -1.52
CITED4Q96RK1 TUBBP11-201ENST00000472255 252 ntBASIC5.54□□□□□ -1.52
CITED4Q96RK1 RPL7P43-201ENST00000478876 753 ntBASIC5.54□□□□□ -1.52
CITED4Q96RK1 HMGB3P15-201ENST00000507326 574 ntBASIC5.54□□□□□ -1.52
CITED4Q96RK1 NRG1-IT1-203ENST00000523743 292 ntTSL 3 BASIC5.54□□□□□ -1.52
CITED4Q96RK1 AP000873.2-209ENST00000528083 547 ntTSL 4 BASIC5.54□□□□□ -1.52
CITED4Q96RK1 FLVCR2-204ENST00000553587 584 ntTSL 2 BASIC5.54□□□□□ -1.52
CITED4Q96RK1 AC023908.2-201ENST00000558616 318 ntTSL 3 BASIC5.54□□□□□ -1.52
CITED4Q96RK1 LINC00933-205ENST00000560917 449 ntTSL 3 BASIC5.54□□□□□ -1.52
CITED4Q96RK1 AC026464.3-201ENST00000563634 564 ntAPPRIS P1 TSL 4 BASIC5.54□□□□□ -1.52
CITED4Q96RK1 AC020910.1-201ENST00000599404 413 ntTSL 5 BASIC5.54□□□□□ -1.52
CITED4Q96RK1 CUX2P1-201ENST00000606426 298 ntBASIC5.54□□□□□ -1.52
CITED4Q96RK1 AC012510.1-201ENST00000607946 759 ntBASIC5.54□□□□□ -1.52
CITED4Q96RK1 MUC1-221ENST00000610359 1101 ntTSL 1 (best) BASIC5.54□□□□□ -1.52
CITED4Q96RK1 AL627230.1-201ENST00000613077 211 ntBASIC5.54□□□□□ -1.52
CITED4Q96RK1 MUC1-227ENST00000615517 951 ntTSL 1 (best) BASIC5.54□□□□□ -1.52
CITED4Q96RK1 AC211486.5-201ENST00000616609 775 ntTSL 3 BASIC5.54□□□□□ -1.52
CITED4Q96RK1 AL138693.1-201ENST00000622219 129 ntBASIC5.54□□□□□ -1.52
CITED4Q96RK1 METAP1-212ENST00000625963 147 ntTSL 5 BASIC5.54□□□□□ -1.52
CITED4Q96RK1 AC072062.1-209ENST00000627336 772 ntTSL 5 BASIC5.54□□□□□ -1.52
CITED4Q96RK1 SNORA43.5-201ENST00000631270 138 ntBASIC5.54□□□□□ -1.52
CITED4Q96RK1 NR2C2-213ENST00000617312 8113 ntTSL 1 (best) BASIC5.54□□□□□ -1.52
CITED4Q96RK1 DTNA-229ENST00000598142 2509 ntTSL 1 (best) BASIC5.54□□□□□ -1.52
CITED4Q96RK1 ZNF90-201ENST00000418063 2310 ntAPPRIS P1 TSL 1 (best) BASIC5.54□□□□□ -1.52
CITED4Q96RK1 PAPOLG-201ENST00000238714 4263 ntAPPRIS P1 TSL 1 (best) BASIC5.54□□□□□ -1.52
CITED4Q96RK1 ZNF699-203ENST00000591998 3358 ntAPPRIS P1 TSL 5 BASIC5.54□□□□□ -1.52
CITED4Q96RK1 PMS2-203ENST00000382321 1386 ntTSL 1 (best) BASIC5.54□□□□□ -1.52
CITED4Q96RK1 SAMMSON-213ENST00000641336 1521 ntBASIC5.53□□□□□ -1.52
CITED4Q96RK1 TNFSF18-201ENST00000404377 2008 ntAPPRIS P1 TSL 1 (best) BASIC5.53□□□□□ -1.52
CITED4Q96RK1 ZNF480-205ENST00000595962 4738 ntAPPRIS P3 TSL 1 (best) BASIC5.53□□□□□ -1.52
CITED4Q96RK1 ELMO1-203ENST00000396045 2524 ntTSL 1 (best) BASIC5.53□□□□□ -1.52
CITED4Q96RK1 MAPK10-328ENST00000641553 4009 ntBASIC5.53□□□□□ -1.52
CITED4Q96RK1 LINC01676-202ENST00000435253 1849 ntTSL 1 (best) BASIC5.53□□□□□ -1.52
CITED4Q96RK1 AC090971.4-201ENST00000560291 1800 ntBASIC5.53□□□□□ -1.52
CITED4Q96RK1 NDUFA5-207ENST00000471770 5608 ntTSL 1 (best) BASIC5.53□□□□□ -1.52
CITED4Q96RK1 ADGRL2-222ENST00000627151 5789 ntTSL 5 BASIC5.53□□□□□ -1.52
CITED4Q96RK1 NADK2-203ENST00000397338 3614 ntTSL 2 BASIC5.53□□□□□ -1.52
CITED4Q96RK1 TNFAIP8-203ENST00000415806 1990 ntTSL 1 (best) BASIC5.53□□□□□ -1.52
CITED4Q96RK1 OFD1P9Y-201ENST00000417699 1491 ntBASIC5.53□□□□□ -1.52
CITED4Q96RK1 SDR42E1-201ENST00000328945 11566 ntAPPRIS P1 TSL 1 (best) BASIC5.53□□□□□ -1.52
CITED4Q96RK1 TNRC6B-201ENST00000301923 15958 ntAPPRIS P3 TSL 5 BASIC5.53□□□□□ -1.52
CITED4Q96RK1 STX3-208ENST00000641815 3236 ntBASIC5.53□□□□□ -1.52
CITED4Q96RK1 RPL32P3-201ENST00000359025 275 ntBASIC5.53□□□□□ -1.52
CITED4Q96RK1 Y_RNA.146-201ENST00000363549 102 ntBASIC5.53□□□□□ -1.52
CITED4Q96RK1 Y_RNA.167-201ENST00000363735 109 ntBASIC5.53□□□□□ -1.52
CITED4Q96RK1 SNORA23-201ENST00000365128 182 ntBASIC5.53□□□□□ -1.52
CITED4Q96RK1 SNORD42.2-201ENST00000365570 69 ntBASIC5.53□□□□□ -1.52
CITED4Q96RK1 Y_RNA.422-201ENST00000384054 114 ntBASIC5.53□□□□□ -1.52
CITED4Q96RK1 AL355862.1-201ENST00000412705 353 ntBASIC5.53□□□□□ -1.52
CITED4Q96RK1 AC002511.2-201ENST00000413796 450 ntTSL 2 BASIC5.53□□□□□ -1.52
CITED4Q96RK1 AL691515.2-201ENST00000414765 466 ntTSL 3 BASIC5.53□□□□□ -1.52
CITED4Q96RK1 RPS23P10-201ENST00000416185 486 ntBASIC5.53□□□□□ -1.52
CITED4Q96RK1 SSXP9-201ENST00000417503 292 ntBASIC5.53□□□□□ -1.52
CITED4Q96RK1 LINC02528-201ENST00000417800 381 ntTSL 2 BASIC5.53□□□□□ -1.52
CITED4Q96RK1 LINC02542-201ENST00000418567 822 ntTSL 5 BASIC5.53□□□□□ -1.52
CITED4Q96RK1 ACTR3BP6-201ENST00000422332 1241 ntBASIC5.53□□□□□ -1.52
CITED4Q96RK1 HMGB3P24-201ENST00000433260 622 ntBASIC5.53□□□□□ -1.52
CITED4Q96RK1 TTTY20-201ENST00000434487 259 ntTSL 1 (best) BASIC5.53□□□□□ -1.52
CITED4Q96RK1 AL451139.1-201ENST00000434718 346 ntBASIC5.53□□□□□ -1.52
CITED4Q96RK1 LINC00570-203ENST00000437795 490 ntTSL 3 BASIC5.53□□□□□ -1.52
CITED4Q96RK1 AC138207.1-201ENST00000442757 545 ntTSL 3 BASIC5.53□□□□□ -1.52
CITED4Q96RK1 AL391361.2-203ENST00000443380 413 ntTSL 2 BASIC5.53□□□□□ -1.52
CITED4Q96RK1 AL121871.1-201ENST00000443413 436 ntBASIC5.53□□□□□ -1.52
CITED4Q96RK1 PTMAP3-201ENST00000447474 330 ntBASIC5.53□□□□□ -1.52
CITED4Q96RK1 AC092422.1-201ENST00000455576 584 ntTSL 4 BASIC5.53□□□□□ -1.52
CITED4Q96RK1 AC009411.2-201ENST00000458359 539 ntTSL 4 BASIC5.53□□□□□ -1.52
Retrieved 100 of 98,524 protein–RNA pairs in 105 ms