Protein–RNA interactions for Protein: Q86TL0

ATG4D, Cysteine protease ATG4D, humanhuman

Predicted RBP Predictions only

Length 474 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4DQ86TL0 5S_rRNA.28-201ENST00000638107 119 ntBASIC5.27□□□□□ -1.57
ATG4DQ86TL0 LINC01422-201ENST00000434868 6043 ntTSL 1 (best) BASIC5.27□□□□□ -1.57
ATG4DQ86TL0 PDE10A-203ENST00000539869 4401 ntAPPRIS ALT2 TSL 1 (best) BASIC5.27□□□□□ -1.57
ATG4DQ86TL0 LARP4-203ENST00000398473 6427 ntAPPRIS P3 TSL 1 (best) BASIC5.27□□□□□ -1.57
ATG4DQ86TL0 AC068870.3-201ENST00000625077 2536 ntBASIC5.27□□□□□ -1.57
ATG4DQ86TL0 RYR2-201ENST00000360064 14850 ntAPPRIS ALT2 TSL 5 BASIC5.27□□□□□ -1.57
ATG4DQ86TL0 AFM-201ENST00000226355 2059 ntAPPRIS P1 TSL 1 (best) BASIC5.27□□□□□ -1.57
ATG4DQ86TL0 LINC01478-201ENST00000587877 2068 ntTSL 1 (best) BASIC5.27□□□□□ -1.57
ATG4DQ86TL0 ALG10B-201ENST00000308742 10253 ntAPPRIS P1 TSL 1 (best) BASIC5.27□□□□□ -1.57
ATG4DQ86TL0 CLSPN-202ENST00000318121 4169 ntAPPRIS P3 TSL 1 (best) BASIC5.26□□□□□ -1.57
ATG4DQ86TL0 TESPA1-203ENST00000524622 4188 ntAPPRIS ALT2 TSL 1 (best) BASIC5.26□□□□□ -1.57
ATG4DQ86TL0 TTC39C-201ENST00000304621 2304 ntAPPRIS P3 TSL 1 (best) BASIC5.26□□□□□ -1.57
ATG4DQ86TL0 PAK3-205ENST00000417227 2196 ntTSL 1 (best) BASIC5.26□□□□□ -1.57
ATG4DQ86TL0 NRXN1-242ENST00000635519 3553 ntTSL 5 BASIC5.26□□□□□ -1.57
ATG4DQ86TL0 KDM4C-214ENST00000536108 3406 ntTSL 1 (best) BASIC5.26□□□□□ -1.57
ATG4DQ86TL0 RORB-201ENST00000376896 9551 ntAPPRIS P1 TSL 1 (best) BASIC5.26□□□□□ -1.57
ATG4DQ86TL0 DST-220ENST00000518935 3547 ntTSL 1 (best) BASIC5.26□□□□□ -1.57
ATG4DQ86TL0 AC114546.3-201ENST00000623582 1734 ntBASIC5.26□□□□□ -1.57
ATG4DQ86TL0 KIF27-204ENST00000413982 4493 ntAPPRIS ALT2 TSL 1 (best) BASIC5.26□□□□□ -1.57
ATG4DQ86TL0 ZNF107-205ENST00000613690 5589 ntAPPRIS ALT2 TSL 5 BASIC5.26□□□□□ -1.57
ATG4DQ86TL0 ENPP2-208ENST00000522826 2667 ntAPPRIS ALT1 TSL 1 (best) BASIC5.26□□□□□ -1.57
ATG4DQ86TL0 ENPP2-201ENST00000075322 2651 ntAPPRIS ALT1 TSL 1 (best) BASIC5.26□□□□□ -1.57
ATG4DQ86TL0 SOBP-204ENST00000618129 1550 ntTSL 1 (best) BASIC5.26□□□□□ -1.57
ATG4DQ86TL0 ZBTB38-222ENST00000637056 6056 ntAPPRIS P1 TSL 5 BASIC5.26□□□□□ -1.57
ATG4DQ86TL0 ATXN2-215ENST00000542287 3443 ntAPPRIS ALT2 TSL 1 (best) BASIC5.26□□□□□ -1.57
ATG4DQ86TL0 CLEC2D-201ENST00000261339 465 ntTSL 1 (best) BASIC5.26□□□□□ -1.57
ATG4DQ86TL0 Y_RNA.5-201ENST00000362334 102 ntBASIC5.26□□□□□ -1.57
ATG4DQ86TL0 RNU6-115P-201ENST00000364310 107 ntBASIC5.26□□□□□ -1.57
ATG4DQ86TL0 RNA5SP500-201ENST00000364486 119 ntBASIC5.26□□□□□ -1.57
ATG4DQ86TL0 RNU6-730P-201ENST00000383954 104 ntBASIC5.26□□□□□ -1.57
ATG4DQ86TL0 SNORA19-201ENST00000384737 128 ntBASIC5.26□□□□□ -1.57
ATG4DQ86TL0 MIR514A2-201ENST00000385131 88 ntBASIC5.26□□□□□ -1.57
ATG4DQ86TL0 MIR514A3-201ENST00000385132 88 ntBASIC5.26□□□□□ -1.57
ATG4DQ86TL0 AL031985.1-201ENST00000392713 418 ntBASIC5.26□□□□□ -1.57
ATG4DQ86TL0 MIR548K-201ENST00000408406 116 ntBASIC5.26□□□□□ -1.57
ATG4DQ86TL0 OFD1P1Y-201ENST00000411756 1225 ntBASIC5.26□□□□□ -1.57
ATG4DQ86TL0 AP000534.2-201ENST00000412729 568 ntBASIC5.26□□□□□ -1.57
ATG4DQ86TL0 FLJ27354-201ENST00000415584 788 ntTSL 2 BASIC5.26□□□□□ -1.57
ATG4DQ86TL0 AC092634.4-201ENST00000419937 423 ntTSL 3 BASIC5.26□□□□□ -1.57
ATG4DQ86TL0 AL353777.1-201ENST00000425552 326 ntBASIC5.26□□□□□ -1.57
ATG4DQ86TL0 AC092168.2-201ENST00000430586 717 ntTSL 3 BASIC5.26□□□□□ -1.57
ATG4DQ86TL0 AL138759.1-201ENST00000432120 645 ntTSL 2 BASIC5.26□□□□□ -1.57
ATG4DQ86TL0 LINC01208-202ENST00000434969 827 ntTSL 2 BASIC5.26□□□□□ -1.57
ATG4DQ86TL0 AL138787.1-202ENST00000437804 898 ntBASIC5.26□□□□□ -1.57
ATG4DQ86TL0 PPIAP20-201ENST00000449839 135 ntBASIC5.26□□□□□ -1.57
ATG4DQ86TL0 AL935212.3-201ENST00000450729 284 ntBASIC5.26□□□□□ -1.57
ATG4DQ86TL0 PRPF38AP1-201ENST00000451976 933 ntBASIC5.26□□□□□ -1.57
ATG4DQ86TL0 AL645608.2-201ENST00000458555 471 ntTSL 2 BASIC5.26□□□□□ -1.57
ATG4DQ86TL0 Y_RNA.653-201ENST00000459091 95 ntBASIC5.26□□□□□ -1.57
ATG4DQ86TL0 ACA64.1-201ENST00000459171 127 ntBASIC5.26□□□□□ -1.57
ATG4DQ86TL0 OR2A1-AS1-202ENST00000467944 422 ntBASIC5.26□□□□□ -1.57
ATG4DQ86TL0 LEKR1-205ENST00000477399 621 ntTSL 2 BASIC5.26□□□□□ -1.57
ATG4DQ86TL0 RPL21P99-201ENST00000480369 423 ntBASIC5.26□□□□□ -1.57
ATG4DQ86TL0 AC073610.1-201ENST00000489971 396 ntBASIC5.26□□□□□ -1.57
ATG4DQ86TL0 DUBR-205ENST00000495228 411 ntTSL 2 BASIC5.26□□□□□ -1.57
ATG4DQ86TL0 AC108752.1-203ENST00000496674 339 ntTSL 5 BASIC5.26□□□□□ -1.57
ATG4DQ86TL0 JCHAIN-204ENST00000510437 640 ntAPPRIS P1 TSL 3 BASIC5.26□□□□□ -1.57
ATG4DQ86TL0 LNX1-AS1-204ENST00000514364 495 ntTSL 3 BASIC5.26□□□□□ -1.57
ATG4DQ86TL0 RNU4-29P-201ENST00000515943 174 ntBASIC5.26□□□□□ -1.57
ATG4DQ86TL0 RNA5SP271-201ENST00000516700 88 ntBASIC5.26□□□□□ -1.57
ATG4DQ86TL0 HMGB1P19-201ENST00000517578 577 ntBASIC5.26□□□□□ -1.57
ATG4DQ86TL0 SPAG11B-207ENST00000528168 481 ntTSL 5 BASIC5.26□□□□□ -1.57
ATG4DQ86TL0 AAGAB-203ENST00000542650 1015 ntTSL 2 BASIC5.26□□□□□ -1.57
ATG4DQ86TL0 AC007569.1-202ENST00000547282 303 ntTSL 3 BASIC5.26□□□□□ -1.57
ATG4DQ86TL0 AC068831.4-201ENST00000556118 109 ntBASIC5.26□□□□□ -1.57
ATG4DQ86TL0 NCAPGP2-201ENST00000557911 754 ntBASIC5.26□□□□□ -1.57
ATG4DQ86TL0 AC068722.1-202ENST00000559600 655 ntTSL 3 BASIC5.26□□□□□ -1.57
ATG4DQ86TL0 AC137800.1-201ENST00000562976 573 ntTSL 4 BASIC5.26□□□□□ -1.57
ATG4DQ86TL0 SS18L2P2-201ENST00000583960 235 ntBASIC5.26□□□□□ -1.57
ATG4DQ86TL0 MIR3942-201ENST00000585264 109 ntBASIC5.26□□□□□ -1.57
ATG4DQ86TL0 AC092364.1-201ENST00000598561 471 ntTSL 3 BASIC5.26□□□□□ -1.57
ATG4DQ86TL0 RDM1-226ENST00000619828 687 ntTSL 1 (best) BASIC5.26□□□□□ -1.57
ATG4DQ86TL0 ADAMTS9-AS2-201ENST00000460833 3691 ntTSL 1 (best) BASIC5.26□□□□□ -1.57
ATG4DQ86TL0 BLZF1-203ENST00000367808 2749 ntAPPRIS P1 TSL 1 (best) BASIC5.26□□□□□ -1.57
ATG4DQ86TL0 ZNF559-ZNF177-201ENST00000434737 2340 ntAPPRIS ALT2 TSL 2 BASIC5.26□□□□□ -1.57
ATG4DQ86TL0 TTI1-203ENST00000449821 3791 ntAPPRIS P1 TSL 2 BASIC5.26□□□□□ -1.57
ATG4DQ86TL0 TRAPPC13-202ENST00000399438 3221 ntAPPRIS ALT1 TSL 2 BASIC5.26□□□□□ -1.57
ATG4DQ86TL0 AL137058.3-201ENST00000624531 3099 ntBASIC5.26□□□□□ -1.57
ATG4DQ86TL0 PGM3-211ENST00000512866 2013 ntTSL 1 (best) BASIC5.26□□□□□ -1.57
ATG4DQ86TL0 ADAMTS9-AS1-203ENST00000471990 1606 ntTSL 2 BASIC5.26□□□□□ -1.57
ATG4DQ86TL0 NXPE1-204ENST00000536271 2289 ntTSL 1 (best) BASIC5.26□□□□□ -1.57
ATG4DQ86TL0 TAF7L-201ENST00000324762 2107 ntAPPRIS ALT2 TSL 2 BASIC5.26□□□□□ -1.57
ATG4DQ86TL0 GALNT3-202ENST00000409882 2107 ntTSL 1 (best) BASIC5.26□□□□□ -1.57
ATG4DQ86TL0 HEATR1-203ENST00000366582 8447 ntAPPRIS P1 TSL 5 BASIC5.26□□□□□ -1.57
ATG4DQ86TL0 CDK1-201ENST00000316629 1733 ntTSL 5 BASIC5.26□□□□□ -1.57
ATG4DQ86TL0 ORC4-215ENST00000536575 6328 ntTSL 2 BASIC5.26□□□□□ -1.57
ATG4DQ86TL0 PIGA-206ENST00000542278 3626 ntAPPRIS P1 TSL 5 BASIC5.25□□□□□ -1.57
ATG4DQ86TL0 ZNF652P1-201ENST00000442420 1309 ntBASIC5.25□□□□□ -1.57
ATG4DQ86TL0 AL049780.3-201ENST00000624612 1583 ntBASIC5.25□□□□□ -1.57
ATG4DQ86TL0 ELOVL6-202ENST00000394607 6454 ntAPPRIS P1 TSL 1 (best) BASIC5.25□□□□□ -1.57
ATG4DQ86TL0 OR1A1-203ENST00000641732 3832 ntAPPRIS P1 BASIC5.25□□□□□ -1.57
ATG4DQ86TL0 AL049641.1-201ENST00000441055 1948 ntBASIC5.25□□□□□ -1.57
ATG4DQ86TL0 SCN2A-202ENST00000375427 8553 ntAPPRIS ALT1 TSL 5 BASIC5.25□□□□□ -1.57
ATG4DQ86TL0 CD84-208ENST00000534968 7885 ntTSL 1 (best) BASIC5.25□□□□□ -1.57
ATG4DQ86TL0 FCER1G-201ENST00000289902 591 ntAPPRIS P1 TSL 1 (best) BASIC5.25□□□□□ -1.57
ATG4DQ86TL0 RNU6-1097P-201ENST00000363586 107 ntBASIC5.25□□□□□ -1.57
ATG4DQ86TL0 RNU1-149P-201ENST00000390870 161 ntBASIC5.25□□□□□ -1.57
ATG4DQ86TL0 RNU2-28P-201ENST00000410457 189 ntBASIC5.25□□□□□ -1.57
ATG4DQ86TL0 AC078974.1-201ENST00000411597 223 ntBASIC5.25□□□□□ -1.57
ATG4DQ86TL0 RPL37P10-201ENST00000412884 288 ntBASIC5.25□□□□□ -1.57
Retrieved 100 of 98,524 protein–RNA pairs in 110 ms