Protein–RNA interactions for Protein: Q7Z407

CSMD3, CUB and sushi domain-containing protein 3, humanhuman

Predictions only

Length 3,707 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD3Q7Z407 AC138761.3-201ENST00000579993 334 ntBASIC2.09□□□□□ -2.07
CSMD3Q7Z407 AC092184.1-201ENST00000625042 715 ntBASIC2.09□□□□□ -2.07
CSMD3Q7Z407 AL049780.3-201ENST00000624612 1583 ntBASIC2.09□□□□□ -2.07
CSMD3Q7Z407 HDX-201ENST00000297977 6200 ntAPPRIS P1 TSL 1 (best) BASIC2.09□□□□□ -2.07
CSMD3Q7Z407 PCDH15-206ENST00000373965 9237 ntAPPRIS ALT2 TSL 5 BASIC2.09□□□□□ -2.08
CSMD3Q7Z407 PLPPR4-201ENST00000370184 4505 ntTSL 5 BASIC2.09□□□□□ -2.08
CSMD3Q7Z407 TSPAN8-201ENST00000247829 1227 ntAPPRIS P1 TSL 1 (best) BASIC2.09□□□□□ -2.08
CSMD3Q7Z407 MIR184-201ENST00000384962 84 ntBASIC2.09□□□□□ -2.08
CSMD3Q7Z407 AL136116.1-201ENST00000403591 381 ntBASIC2.09□□□□□ -2.08
CSMD3Q7Z407 AC007161.1-201ENST00000418534 1061 ntTSL 3 BASIC2.09□□□□□ -2.08
CSMD3Q7Z407 AC104687.1-201ENST00000485829 412 ntBASIC2.09□□□□□ -2.08
CSMD3Q7Z407 KLRF2-201ENST00000535540 731 ntAPPRIS P1 TSL 1 (best) BASIC2.09□□□□□ -2.08
CSMD3Q7Z407 AC107016.2-201ENST00000547968 190 ntBASIC2.09□□□□□ -2.08
CSMD3Q7Z407 AC009303.2-205ENST00000627670 1091 ntTSL 5 BASIC2.09□□□□□ -2.08
CSMD3Q7Z407 AL596275.2-204ENST00000641628 552 ntBASIC2.09□□□□□ -2.08
CSMD3Q7Z407 AL596275.2-206ENST00000641957 626 ntBASIC2.09□□□□□ -2.08
CSMD3Q7Z407 Z82217.1-201ENST00000625157 8149 ntBASIC2.09□□□□□ -2.08
CSMD3Q7Z407 PLCE1-202ENST00000371380 12024 ntAPPRIS P3 TSL 1 (best) BASIC2.09□□□□□ -2.08
CSMD3Q7Z407 PKHD1-202ENST00000371117 16282 ntAPPRIS P4 TSL 1 (best) BASIC2.09□□□□□ -2.08
CSMD3Q7Z407 CNGB3-201ENST00000320005 4347 ntAPPRIS P1 TSL 1 (best) BASIC2.09□□□□□ -2.08
CSMD3Q7Z407 PTPRD-203ENST00000381196 9911 ntAPPRIS P1 TSL 5 BASIC2.09□□□□□ -2.08
CSMD3Q7Z407 ARPP19-211ENST00000568196 1489 ntTSL 2 BASIC2.09□□□□□ -2.08
CSMD3Q7Z407 PPP1R9A-208ENST00000456331 10090 ntTSL 1 (best) BASIC2.09□□□□□ -2.08
CSMD3Q7Z407 MAPK10-235ENST00000638225 8941 ntAPPRIS P2 TSL 1 (best) BASIC2.08□□□□□ -2.08
CSMD3Q7Z407 DCAF13P3-201ENST00000561147 1334 ntBASIC2.08□□□□□ -2.08
CSMD3Q7Z407 PEX5L-202ENST00000392649 8540 ntAPPRIS ALT2 TSL 5 BASIC2.08□□□□□ -2.08
CSMD3Q7Z407 APOH-201ENST00000205948 1176 ntAPPRIS P1 TSL 1 (best) BASIC2.08□□□□□ -2.08
CSMD3Q7Z407 C1orf100-202ENST00000366537 483 ntTSL 1 (best) BASIC2.08□□□□□ -2.08
CSMD3Q7Z407 AC090952.1-201ENST00000424242 446 ntTSL 3 BASIC2.08□□□□□ -2.08
CSMD3Q7Z407 FAM103A2P-201ENST00000444122 354 ntBASIC2.08□□□□□ -2.08
CSMD3Q7Z407 AC007099.2-201ENST00000444852 336 ntTSL 5 BASIC2.08□□□□□ -2.08
CSMD3Q7Z407 AL365295.1-201ENST00000454942 514 ntTSL 5 BASIC2.08□□□□□ -2.08
CSMD3Q7Z407 AC083906.5-201ENST00000503722 328 ntBASIC2.08□□□□□ -2.08
CSMD3Q7Z407 AC008114.1-201ENST00000544122 427 ntTSL 2 BASIC2.08□□□□□ -2.08
CSMD3Q7Z407 CR381670.1-201ENST00000624291 1693 ntBASIC2.08□□□□□ -2.08
CSMD3Q7Z407 MACC1-202ENST00000400331 9159 ntAPPRIS P1 TSL 2 BASIC2.08□□□□□ -2.08
CSMD3Q7Z407 GABRG2-229ENST00000641017 3628 ntBASIC2.08□□□□□ -2.08
CSMD3Q7Z407 RN7SKP56-201ENST00000410513 331 ntBASIC2.08□□□□□ -2.08
CSMD3Q7Z407 AL160275.2-201ENST00000412010 394 ntBASIC2.08□□□□□ -2.08
CSMD3Q7Z407 WASF1P1-201ENST00000447560 1131 ntBASIC2.08□□□□□ -2.08
CSMD3Q7Z407 ELOCP23-201ENST00000452014 332 ntBASIC2.08□□□□□ -2.08
CSMD3Q7Z407 RPL23AP73-201ENST00000492507 471 ntBASIC2.08□□□□□ -2.08
CSMD3Q7Z407 NRG1-IT1-201ENST00000520444 758 ntTSL 3 BASIC2.08□□□□□ -2.08
CSMD3Q7Z407 AC009163.5-201ENST00000575421 637 ntBASIC2.08□□□□□ -2.08
CSMD3Q7Z407 MAPKAPK5-AS1-205ENST00000590479 543 ntTSL 2 BASIC2.08□□□□□ -2.08
CSMD3Q7Z407 DNAJC19P3-201ENST00000594491 331 ntBASIC2.08□□□□□ -2.08
CSMD3Q7Z407 AC015871.2-201ENST00000603605 948 ntBASIC2.08□□□□□ -2.08
CSMD3Q7Z407 PLAG1-201ENST00000316981 7322 ntAPPRIS P1 TSL 1 (best) BASIC2.08□□□□□ -2.08
CSMD3Q7Z407 AC026523.1-202ENST00000559363 1401 ntTSL 1 (best) BASIC2.08□□□□□ -2.08
CSMD3Q7Z407 GBE1-205ENST00000489715 2513 ntAPPRIS ALT2 TSL 2 BASIC2.08□□□□□ -2.08
CSMD3Q7Z407 C2orf66-201ENST00000342506 1669 ntAPPRIS P1 TSL 1 (best) BASIC2.08□□□□□ -2.08
CSMD3Q7Z407 RYR2-201ENST00000360064 14850 ntAPPRIS ALT2 TSL 5 BASIC2.08□□□□□ -2.08
CSMD3Q7Z407 FMN2-207ENST00000545751 1913 ntTSL 5 BASIC2.08□□□□□ -2.08
CSMD3Q7Z407 ERBB4-203ENST00000402597 11699 ntTSL 1 (best) BASIC2.08□□□□□ -2.08
CSMD3Q7Z407 PLS1-201ENST00000337777 3755 ntAPPRIS P1 TSL 1 (best) BASIC2.08□□□□□ -2.08
CSMD3Q7Z407 WDR72-201ENST00000360509 5887 ntAPPRIS P2 TSL 1 (best) BASIC2.08□□□□□ -2.08
CSMD3Q7Z407 CST9LP2-201ENST00000437612 320 ntBASIC2.08□□□□□ -2.08
CSMD3Q7Z407 RN7SKP244-201ENST00000516513 307 ntBASIC2.08□□□□□ -2.08
CSMD3Q7Z407 AP001636.2-201ENST00000525517 696 ntBASIC2.08□□□□□ -2.08
CSMD3Q7Z407 SULT1C2P2-201ENST00000562517 294 ntBASIC2.08□□□□□ -2.08
CSMD3Q7Z407 AC124856.1-201ENST00000600819 896 ntBASIC2.08□□□□□ -2.08
CSMD3Q7Z407 CABS1-201ENST00000273936 1532 ntAPPRIS P1 TSL 1 (best) BASIC2.08□□□□□ -2.08
CSMD3Q7Z407 ST8SIA4-201ENST00000231461 6303 ntAPPRIS P1 TSL 1 (best) BASIC2.08□□□□□ -2.08
CSMD3Q7Z407 CCNH-206ENST00000508855 2391 ntTSL 1 (best) BASIC2.08□□□□□ -2.08
CSMD3Q7Z407 SMCO3-201ENST00000316048 2104 ntAPPRIS P1 TSL 1 (best) BASIC2.08□□□□□ -2.08
CSMD3Q7Z407 GAPT-201ENST00000318469 2119 ntAPPRIS P1 BASIC2.08□□□□□ -2.08
CSMD3Q7Z407 CHM-201ENST00000357749 5442 ntAPPRIS P1 TSL 1 (best) BASIC2.08□□□□□ -2.08
CSMD3Q7Z407 ANKRD28-215ENST00000624145 6383 ntTSL 2 BASIC2.07□□□□□ -2.08
CSMD3Q7Z407 EXTL2-201ENST00000370113 2835 ntAPPRIS P1 TSL 1 (best) BASIC2.07□□□□□ -2.08
CSMD3Q7Z407 Y_RNA.4-201ENST00000362333 112 ntBASIC2.07□□□□□ -2.08
CSMD3Q7Z407 RN7SKP223-201ENST00000410582 62 ntBASIC2.07□□□□□ -2.08
CSMD3Q7Z407 RNA5SP445-201ENST00000515889 115 ntBASIC2.07□□□□□ -2.08
CSMD3Q7Z407 AC027018.1-201ENST00000533978 396 ntTSL 4 BASIC2.07□□□□□ -2.08
CSMD3Q7Z407 AL049874.4-201ENST00000557593 255 ntBASIC2.07□□□□□ -2.08
CSMD3Q7Z407 uc_338.1-201ENST00000612113 180 ntBASIC2.07□□□□□ -2.08
CSMD3Q7Z407 ASAH1-263ENST00000637872 886 ntTSL 5 BASIC2.07□□□□□ -2.08
CSMD3Q7Z407 GABRG2-209ENST00000638660 3799 ntTSL 5 BASIC2.07□□□□□ -2.08
CSMD3Q7Z407 C12orf45-204ENST00000552951 23529 ntAPPRIS P1 TSL 1 (best) BASIC2.07□□□□□ -2.08
CSMD3Q7Z407 PLEKHG7-203ENST00000638590 3267 ntAPPRIS P1 TSL 2 BASIC2.07□□□□□ -2.08
CSMD3Q7Z407 SNORD114-30-201ENST00000364448 72 ntBASIC2.07□□□□□ -2.08
CSMD3Q7Z407 MIR764-201ENST00000390811 85 ntBASIC2.07□□□□□ -2.08
CSMD3Q7Z407 AC090525.1-201ENST00000479116 478 ntBASIC2.07□□□□□ -2.08
CSMD3Q7Z407 AC069499.1-201ENST00000489433 509 ntBASIC2.07□□□□□ -2.08
CSMD3Q7Z407 COX6CP8-201ENST00000522620 226 ntBASIC2.07□□□□□ -2.08
CSMD3Q7Z407 AP001783.1-202ENST00000534620 408 ntTSL 2 BASIC2.07□□□□□ -2.08
CSMD3Q7Z407 AC078778.1-201ENST00000547177 735 ntTSL 3 BASIC2.07□□□□□ -2.08
CSMD3Q7Z407 AP001004.1-201ENST00000582468 324 ntBASIC2.07□□□□□ -2.08
CSMD3Q7Z407 BNIP3P8-201ENST00000597863 560 ntBASIC2.07□□□□□ -2.08
CSMD3Q7Z407 PRELID3BP8-201ENST00000604148 295 ntBASIC2.07□□□□□ -2.08
CSMD3Q7Z407 MID1-206ENST00000380787 5973 ntAPPRIS P1 TSL 1 (best) BASIC2.07□□□□□ -2.08
CSMD3Q7Z407 SYNE2-203ENST00000357395 21555 ntTSL 5 BASIC2.07□□□□□ -2.08
CSMD3Q7Z407 LINC02477-201ENST00000512652 1417 ntTSL 5 BASIC2.07□□□□□ -2.08
CSMD3Q7Z407 ADGRG7-202ENST00000475887 2035 ntTSL 2 BASIC2.07□□□□□ -2.08
CSMD3Q7Z407 SCN1A-202ENST00000375405 8097 ntAPPRIS P3 TSL 5 BASIC2.07□□□□□ -2.08
CSMD3Q7Z407 AL356489.2-201ENST00000566968 3528 ntBASIC2.07□□□□□ -2.08
CSMD3Q7Z407 C8orf34-202ENST00000337103 3652 ntAPPRIS ALT2 TSL 1 (best) BASIC2.07□□□□□ -2.08
CSMD3Q7Z407 AC126124.2-201ENST00000413542 321 ntBASIC2.07□□□□□ -2.08
CSMD3Q7Z407 AP001599.1-201ENST00000426771 361 ntTSL 3 BASIC2.07□□□□□ -2.08
CSMD3Q7Z407 UBE2D3P1-201ENST00000436669 444 ntBASIC2.07□□□□□ -2.08
CSMD3Q7Z407 PAIP2-205ENST00000510080 858 ntAPPRIS P1 TSL 1 (best) BASIC2.07□□□□□ -2.08
Retrieved 100 of 98,524 protein–RNA pairs in 104.9 ms