Protein–RNA interactions for Protein: Q5VTB9

RNF220, E3 ubiquitin-protein ligase RNF220, humanhuman

Predictions only

Length 566 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF220Q5VTB9 RN7SL443P-201ENST00000464331 290 ntBASIC4.69□□□□□ -1.66
RNF220Q5VTB9 LINC00971-203ENST00000491849 452 ntTSL 3 BASIC4.69□□□□□ -1.66
RNF220Q5VTB9 AC091435.1-201ENST00000505442 584 ntBASIC4.69□□□□□ -1.66
RNF220Q5VTB9 PGAM1P13-201ENST00000507497 754 ntBASIC4.69□□□□□ -1.66
RNF220Q5VTB9 LINC02496-201ENST00000509559 584 ntTSL 3 BASIC4.69□□□□□ -1.66
RNF220Q5VTB9 AC026434.1-201ENST00000511474 454 ntTSL 3 BASIC4.69□□□□□ -1.66
RNF220Q5VTB9 AC084880.2-201ENST00000536009 501 ntTSL 3 BASIC4.69□□□□□ -1.66
RNF220Q5VTB9 LINC02468-201ENST00000543778 633 ntTSL 5 BASIC4.69□□□□□ -1.66
RNF220Q5VTB9 AL359233.1-201ENST00000554029 364 ntTSL 3 BASIC4.69□□□□□ -1.66
RNF220Q5VTB9 AL162872.1-201ENST00000557709 448 ntTSL 3 BASIC4.69□□□□□ -1.66
RNF220Q5VTB9 HMGB3P26-201ENST00000560051 582 ntBASIC4.69□□□□□ -1.66
RNF220Q5VTB9 AC009558.1-201ENST00000561174 581 ntTSL 4 BASIC4.69□□□□□ -1.66
RNF220Q5VTB9 NR2F2-AS1-211ENST00000561402 589 ntTSL 3 BASIC4.69□□□□□ -1.66
RNF220Q5VTB9 AC090457.1-201ENST00000579775 211 ntTSL 3 BASIC4.69□□□□□ -1.66
RNF220Q5VTB9 ABBA01006766.1-201ENST00000584728 294 ntBASIC4.69□□□□□ -1.66
RNF220Q5VTB9 AL353997.4-201ENST00000586196 166 ntBASIC4.69□□□□□ -1.66
RNF220Q5VTB9 AC119751.7-201ENST00000600494 245 ntBASIC4.69□□□□□ -1.66
RNF220Q5VTB9 ATXN3L-202ENST00000622204 837 ntTSL 5 BASIC4.69□□□□□ -1.66
RNF220Q5VTB9 AL356121.2-201ENST00000624715 780 ntBASIC4.69□□□□□ -1.66
RNF220Q5VTB9 AC098617.1-218ENST00000628836 624 ntTSL 5 BASIC4.69□□□□□ -1.66
RNF220Q5VTB9 AL049767.1-202ENST00000637826 242 ntBASIC4.69□□□□□ -1.66
RNF220Q5VTB9 LINC02261-201ENST00000512873 2802 ntTSL 2 BASIC4.69□□□□□ -1.66
RNF220Q5VTB9 DDR2-202ENST00000367922 10160 ntAPPRIS P1 TSL 1 (best) BASIC4.69□□□□□ -1.66
RNF220Q5VTB9 RIMS2-201ENST00000262231 3854 ntTSL 1 (best) BASIC4.69□□□□□ -1.66
RNF220Q5VTB9 GPR85-201ENST00000297146 5079 ntAPPRIS P1 TSL 1 (best) BASIC4.69□□□□□ -1.66
RNF220Q5VTB9 CLCA3P-202ENST00000466454 3412 ntTSL 1 (best) BASIC4.68□□□□□ -1.66
RNF220Q5VTB9 AC016588.2-201ENST00000632484 3021 ntBASIC4.68□□□□□ -1.66
RNF220Q5VTB9 AC009951.1-201ENST00000623674 2614 ntBASIC4.68□□□□□ -1.66
RNF220Q5VTB9 NAP1L1-204ENST00000535020 1686 ntTSL 2 BASIC4.68□□□□□ -1.66
RNF220Q5VTB9 PTPRO-204ENST00000445537 4062 ntAPPRIS ALT2 TSL 2 BASIC4.68□□□□□ -1.66
RNF220Q5VTB9 OR2B6-201ENST00000244623 942 ntAPPRIS P1 BASIC4.68□□□□□ -1.66
RNF220Q5VTB9 AL161781.1-201ENST00000354277 403 ntBASIC4.68□□□□□ -1.66
RNF220Q5VTB9 MIR448-201ENST00000362131 111 ntBASIC4.68□□□□□ -1.66
RNF220Q5VTB9 RNU5F-6P-201ENST00000362979 116 ntBASIC4.68□□□□□ -1.66
RNF220Q5VTB9 RNY3P10-201ENST00000384764 102 ntBASIC4.68□□□□□ -1.66
RNF220Q5VTB9 U3.29-201ENST00000391296 212 ntBASIC4.68□□□□□ -1.66
RNF220Q5VTB9 PPP1R1C-203ENST00000409702 1157 ntAPPRIS P1 TSL 1 (best) BASIC4.68□□□□□ -1.66
RNF220Q5VTB9 RN7SKP142-201ENST00000411236 328 ntBASIC4.68□□□□□ -1.66
RNF220Q5VTB9 MTCO1P17-201ENST00000411522 491 ntBASIC4.68□□□□□ -1.66
RNF220Q5VTB9 NPM1P4-201ENST00000414095 812 ntBASIC4.68□□□□□ -1.66
RNF220Q5VTB9 LINC02528-201ENST00000417800 381 ntTSL 2 BASIC4.68□□□□□ -1.66
RNF220Q5VTB9 SLC35E1P1-201ENST00000419313 864 ntBASIC4.68□□□□□ -1.66
RNF220Q5VTB9 RPS12P23-201ENST00000419579 400 ntBASIC4.68□□□□□ -1.66
RNF220Q5VTB9 MTCYBP24-201ENST00000420387 1106 ntBASIC4.68□□□□□ -1.66
RNF220Q5VTB9 AC092484.1-201ENST00000420548 833 ntTSL 5 BASIC4.68□□□□□ -1.66
RNF220Q5VTB9 RPS12P5-201ENST00000423449 371 ntBASIC4.68□□□□□ -1.66
RNF220Q5VTB9 AC023590.1-204ENST00000434023 431 ntTSL 5 BASIC4.68□□□□□ -1.66
RNF220Q5VTB9 ELOCP18-201ENST00000434209 337 ntBASIC4.68□□□□□ -1.66
RNF220Q5VTB9 RPS3AP54-201ENST00000435535 734 ntBASIC4.68□□□□□ -1.66
RNF220Q5VTB9 DOCK9-AS1-201ENST00000439367 392 ntTSL 3 BASIC4.68□□□□□ -1.66
RNF220Q5VTB9 LINC01317-202ENST00000442026 677 ntTSL 3 BASIC4.68□□□□□ -1.66
RNF220Q5VTB9 AP000936.2-201ENST00000447151 681 ntBASIC4.68□□□□□ -1.66
RNF220Q5VTB9 MYCBP2-AS1-202ENST00000448470 333 ntTSL 3 BASIC4.68□□□□□ -1.66
RNF220Q5VTB9 RNA5SP269-201ENST00000459032 137 ntBASIC4.68□□□□□ -1.66
RNF220Q5VTB9 AC098851.1-201ENST00000476561 570 ntTSL 4 BASIC4.68□□□□□ -1.66
RNF220Q5VTB9 FSBP-201ENST00000481490 1158 ntTSL 1 (best) BASIC4.68□□□□□ -1.66
RNF220Q5VTB9 TM4SF1-AS1-202ENST00000496491 754 ntTSL 2 BASIC4.68□□□□□ -1.66
RNF220Q5VTB9 AL139147.1-201ENST00000502413 1156 ntTSL 2 BASIC4.68□□□□□ -1.66
RNF220Q5VTB9 AC093752.2-201ENST00000506942 573 ntTSL 5 BASIC4.68□□□□□ -1.66
RNF220Q5VTB9 PTGES3P3-201ENST00000511479 482 ntBASIC4.68□□□□□ -1.66
RNF220Q5VTB9 GYPA-209ENST00000512789 258 ntTSL 1 (best) BASIC4.68□□□□□ -1.66
RNF220Q5VTB9 AC093766.1-202ENST00000513400 718 ntTSL 3 BASIC4.68□□□□□ -1.66
RNF220Q5VTB9 AC116347.2-201ENST00000514912 523 ntBASIC4.68□□□□□ -1.66
RNF220Q5VTB9 AC133634.1-201ENST00000517695 566 ntTSL 3 BASIC4.68□□□□□ -1.66
RNF220Q5VTB9 TATDN1-206ENST00000519548 889 ntTSL 1 (best) BASIC4.68□□□□□ -1.66
RNF220Q5VTB9 IGKV3D-34-201ENST00000522638 302 ntBASIC4.68□□□□□ -1.66
RNF220Q5VTB9 AP003385.6-201ENST00000531603 374 ntBASIC4.68□□□□□ -1.66
RNF220Q5VTB9 AP000873.5-201ENST00000533906 236 ntBASIC4.68□□□□□ -1.66
RNF220Q5VTB9 AC010197.1-201ENST00000541860 578 ntTSL 4 BASIC4.68□□□□□ -1.66
RNF220Q5VTB9 AC087477.4-201ENST00000560586 542 ntTSL 4 BASIC4.68□□□□□ -1.66
RNF220Q5VTB9 AC012414.6-201ENST00000568241 401 ntBASIC4.68□□□□□ -1.66
RNF220Q5VTB9 AC090615.1-201ENST00000577519 154 ntBASIC4.68□□□□□ -1.66
RNF220Q5VTB9 AC083760.1-201ENST00000589621 670 ntBASIC4.68□□□□□ -1.66
RNF220Q5VTB9 SLC25A36P1-201ENST00000590111 465 ntBASIC4.68□□□□□ -1.66
RNF220Q5VTB9 AC112230.1-201ENST00000604342 547 ntBASIC4.68□□□□□ -1.66
RNF220Q5VTB9 CT45A9-201ENST00000604569 770 ntAPPRIS P1 TSL 1 (best) BASIC4.68□□□□□ -1.66
RNF220Q5VTB9 CT45A8-201ENST00000611438 770 ntAPPRIS P1 TSL 1 (best) BASIC4.68□□□□□ -1.66
RNF220Q5VTB9 CT45A6-201ENST00000612878 770 ntAPPRIS P1 TSL 1 (best) BASIC4.68□□□□□ -1.66
RNF220Q5VTB9 CT45A10-202ENST00000617981 578 ntAPPRIS P1 TSL 1 (best) BASIC4.68□□□□□ -1.66
RNF220Q5VTB9 U73479.1-201ENST00000618062 168 ntBASIC4.68□□□□□ -1.66
RNF220Q5VTB9 AC138393.3-201ENST00000618397 573 ntTSL 3 BASIC4.68□□□□□ -1.66
RNF220Q5VTB9 WWOX-217ENST00000620008 450 ntTSL 2 BASIC4.68□□□□□ -1.66
RNF220Q5VTB9 CT45A7-202ENST00000620885 578 ntAPPRIS P1 TSL 1 (best) BASIC4.68□□□□□ -1.66
RNF220Q5VTB9 PCBP1-AS1-307ENST00000627050 912 ntTSL 5 BASIC4.68□□□□□ -1.66
RNF220Q5VTB9 VIPR1-AS1-223ENST00000627073 451 ntTSL 5 BASIC4.68□□□□□ -1.66
RNF220Q5VTB9 AC090582.1-201ENST00000636321 199 ntBASIC4.68□□□□□ -1.66
RNF220Q5VTB9 ZNF382-210ENST00000639288 834 ntTSL 5 BASIC4.68□□□□□ -1.66
RNF220Q5VTB9 DMD-229ENST00000619831 13734 ntAPPRIS ALT2 TSL 5 BASIC4.68□□□□□ -1.66
RNF220Q5VTB9 SPART-202ENST00000438666 4789 ntAPPRIS P1 TSL 1 (best) BASIC4.68□□□□□ -1.66
RNF220Q5VTB9 AC026951.1-201ENST00000559530 2459 ntBASIC4.68□□□□□ -1.66
RNF220Q5VTB9 TLR8-201ENST00000218032 4216 ntAPPRIS ALT2 TSL 1 (best) BASIC4.68□□□□□ -1.66
RNF220Q5VTB9 MAPK10-236ENST00000638313 3971 ntTSL 5 BASIC4.68□□□□□ -1.66
RNF220Q5VTB9 AC011493.1-201ENST00000596753 1632 ntBASIC4.68□□□□□ -1.66
RNF220Q5VTB9 CARF-203ENST00000414439 2099 ntTSL 2 BASIC4.68□□□□□ -1.66
RNF220Q5VTB9 SLC44A5-202ENST00000370859 3896 ntAPPRIS ALT2 TSL 2 BASIC4.68□□□□□ -1.66
RNF220Q5VTB9 SEPT7-205ENST00000432293 1362 ntTSL 1 (best) BASIC4.67□□□□□ -1.66
RNF220Q5VTB9 RAP1B-201ENST00000250559 13438 ntAPPRIS P1 TSL 1 (best) BASIC4.67□□□□□ -1.66
RNF220Q5VTB9 AC006378.2-201ENST00000623178 2476 ntBASIC4.67□□□□□ -1.66
RNF220Q5VTB9 MYNN-203ENST00000544106 4815 ntTSL 1 (best) BASIC4.67□□□□□ -1.66
RNF220Q5VTB9 USP29-202ENST00000598197 3284 ntAPPRIS P1 BASIC4.67□□□□□ -1.66
Retrieved 100 of 98,524 protein–RNA pairs in 97.2 ms