Protein–RNA interactions for Protein: Q5T4S7

UBR4, E3 ubiquitin-protein ligase UBR4, humanhuman

Predictions only

Length 5,183 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBR4Q5T4S7 SLC16A12-AS1-202ENST00000454270 478 ntTSL 2 BASIC1.79□□□□□ -2.12
UBR4Q5T4S7 PPBPP1-201ENST00000510807 373 ntBASIC1.79□□□□□ -2.12
UBR4Q5T4S7 AC008011.1-201ENST00000545989 227 ntBASIC1.79□□□□□ -2.12
UBR4Q5T4S7 LINC01539-206ENST00000593282 678 ntTSL 4 BASIC1.79□□□□□ -2.12
UBR4Q5T4S7 FZD3-201ENST00000240093 13736 ntAPPRIS P1 TSL 1 (best) BASIC1.79□□□□□ -2.12
UBR4Q5T4S7 AL023755.1-201ENST00000441851 1801 ntTSL 2 BASIC1.79□□□□□ -2.12
UBR4Q5T4S7 FANCI-202ENST00000310775 4743 ntAPPRIS ALT2 TSL 1 (best) BASIC1.79□□□□□ -2.12
UBR4Q5T4S7 CLCN3-211ENST00000613795 5874 ntTSL 5 BASIC1.79□□□□□ -2.12
UBR4Q5T4S7 TSC1-208ENST00000545250 8310 ntTSL 5 BASIC1.79□□□□□ -2.12
UBR4Q5T4S7 PDE4D-226ENST00000546160 7690 ntTSL 5 BASIC1.79□□□□□ -2.12
UBR4Q5T4S7 SSR1-201ENST00000244763 9669 ntAPPRIS P1 TSL 1 (best) BASIC1.79□□□□□ -2.12
UBR4Q5T4S7 SLC24A2-202ENST00000341998 10749 ntAPPRIS P1 TSL 1 (best) BASIC1.79□□□□□ -2.12
UBR4Q5T4S7 RNA5SP68-201ENST00000363885 119 ntBASIC1.79□□□□□ -2.12
UBR4Q5T4S7 MIR34A-201ENST00000385130 110 ntBASIC1.79□□□□□ -2.12
UBR4Q5T4S7 TRAV14DV4-201ENST00000390440 425 ntAPPRIS P1 BASIC1.79□□□□□ -2.12
UBR4Q5T4S7 RPL7AP73-201ENST00000413490 353 ntBASIC1.79□□□□□ -2.12
UBR4Q5T4S7 OR51A6P-201ENST00000418680 1004 ntBASIC1.79□□□□□ -2.12
UBR4Q5T4S7 IGKV1OR9-2-201ENST00000431378 277 ntBASIC1.79□□□□□ -2.12
UBR4Q5T4S7 AC112229.2-201ENST00000456683 476 ntTSL 5 BASIC1.79□□□□□ -2.12
UBR4Q5T4S7 LINC02112-202ENST00000512976 464 ntTSL 3 BASIC1.79□□□□□ -2.12
UBR4Q5T4S7 RNA5SP230-201ENST00000517039 122 ntBASIC1.79□□□□□ -2.12
UBR4Q5T4S7 RN7SKP283-201ENST00000517197 270 ntBASIC1.79□□□□□ -2.12
UBR4Q5T4S7 COX6CP8-201ENST00000522620 226 ntBASIC1.79□□□□□ -2.12
UBR4Q5T4S7 AC106785.3-201ENST00000564064 847 ntBASIC1.79□□□□□ -2.12
UBR4Q5T4S7 DNM3OS-201ENST00000417354 4358 ntTSL 4 BASIC1.79□□□□□ -2.12
UBR4Q5T4S7 SCEL-201ENST00000349847 2386 ntAPPRIS P4 TSL 1 (best) BASIC1.79□□□□□ -2.12
UBR4Q5T4S7 BCLAF1-213ENST00000530767 4186 ntAPPRIS ALT2 TSL 1 (best) BASIC1.79□□□□□ -2.12
UBR4Q5T4S7 GTDC1-204ENST00000392869 10514 ntAPPRIS P1 TSL 5 BASIC1.79□□□□□ -2.12
UBR4Q5T4S7 CD84-206ENST00000368054 8181 ntAPPRIS P3 TSL 1 (best) BASIC1.79□□□□□ -2.12
UBR4Q5T4S7 ZNF445-201ENST00000396077 18299 ntAPPRIS P1 TSL 1 (best) BASIC1.79□□□□□ -2.12
UBR4Q5T4S7 ZNF462-201ENST00000277225 10414 ntAPPRIS P2 TSL 1 (best) BASIC1.79□□□□□ -2.12
UBR4Q5T4S7 RAB18-209ENST00000621805 4894 ntTSL 1 (best) BASIC1.78□□□□□ -2.12
UBR4Q5T4S7 FRG1BP-201ENST00000278882 761 ntBASIC1.78□□□□□ -2.12
UBR4Q5T4S7 RNVU1-3-201ENST00000364313 161 ntBASIC1.78□□□□□ -2.12
UBR4Q5T4S7 RNU6-1032P-201ENST00000384100 107 ntBASIC1.78□□□□□ -2.12
UBR4Q5T4S7 CCDC126-203ENST00000410069 890 ntAPPRIS P1 TSL 1 (best) BASIC1.78□□□□□ -2.12
UBR4Q5T4S7 RN7SKP111-201ENST00000410349 271 ntBASIC1.78□□□□□ -2.12
UBR4Q5T4S7 AC004552.1-201ENST00000419089 348 ntBASIC1.78□□□□□ -2.12
UBR4Q5T4S7 RPL7P24-201ENST00000493052 752 ntBASIC1.78□□□□□ -2.12
UBR4Q5T4S7 ARNTL2-AS1-201ENST00000500498 804 ntTSL 1 (best) BASIC1.78□□□□□ -2.12
UBR4Q5T4S7 COMMD10-206ENST00000515539 869 ntTSL 3 BASIC1.78□□□□□ -2.12
UBR4Q5T4S7 RNA5SP249-201ENST00000516127 99 ntBASIC1.78□□□□□ -2.12
UBR4Q5T4S7 AC068672.2-201ENST00000524022 336 ntTSL 3 BASIC1.78□□□□□ -2.12
UBR4Q5T4S7 SLC12A1-210ENST00000561031 735 ntTSL 2 BASIC1.78□□□□□ -2.12
UBR4Q5T4S7 AC010547.3-201ENST00000569271 440 ntTSL 2 BASIC1.78□□□□□ -2.12
UBR4Q5T4S7 AC091046.2-201ENST00000620775 665 ntBASIC1.78□□□□□ -2.12
UBR4Q5T4S7 LRP2-201ENST00000263816 15808 ntAPPRIS P1 TSL 1 (best) BASIC1.78□□□□□ -2.12
UBR4Q5T4S7 REV3L-203ENST00000368805 10461 ntAPPRIS P1 TSL 5 BASIC1.78□□□□□ -2.12
UBR4Q5T4S7 SLC30A6-205ENST00000435660 4776 ntTSL 1 (best) BASIC1.78□□□□□ -2.12
UBR4Q5T4S7 RNU6-707P-201ENST00000364647 95 ntBASIC1.78□□□□□ -2.12
UBR4Q5T4S7 RHOT1P2-201ENST00000366423 333 ntBASIC1.78□□□□□ -2.12
UBR4Q5T4S7 RNA5SP270-201ENST00000411361 118 ntBASIC1.78□□□□□ -2.12
UBR4Q5T4S7 AL139109.1-201ENST00000455491 297 ntBASIC1.78□□□□□ -2.12
UBR4Q5T4S7 AC105918.1-201ENST00000474399 838 ntBASIC1.78□□□□□ -2.12
UBR4Q5T4S7 AL135746.1-201ENST00000554205 547 ntTSL 3 BASIC1.78□□□□□ -2.12
UBR4Q5T4S7 AC027216.1-201ENST00000577726 685 ntBASIC1.78□□□□□ -2.12
UBR4Q5T4S7 AL157938.2-208ENST00000590461 877 ntTSL 5 BASIC1.78□□□□□ -2.12
UBR4Q5T4S7 LINC01533-205ENST00000593056 607 ntTSL 3 BASIC1.78□□□□□ -2.12
UBR4Q5T4S7 KLHL4-202ENST00000373119 5818 ntAPPRIS P1 TSL 1 (best) BASIC1.78□□□□□ -2.12
UBR4Q5T4S7 ADAM18-206ENST00000520772 1429 ntTSL 1 (best) BASIC1.78□□□□□ -2.12
UBR4Q5T4S7 MDM4-203ENST00000367182 10073 ntAPPRIS P1 TSL 1 (best) BASIC1.78□□□□□ -2.12
UBR4Q5T4S7 ANK2-212ENST00000506722 8051 ntAPPRIS ALT2 TSL 1 (best) BASIC1.78□□□□□ -2.12
UBR4Q5T4S7 SAMSN1-201ENST00000285670 2185 ntTSL 1 (best) BASIC1.78□□□□□ -2.12
UBR4Q5T4S7 TMEM30A-202ENST00000370050 3775 ntTSL 1 (best) BASIC1.78□□□□□ -2.12
UBR4Q5T4S7 SOS1-203ENST00000426016 8517 ntAPPRIS P2 TSL 2 BASIC1.78□□□□□ -2.12
UBR4Q5T4S7 TRDN-206ENST00000628709 1661 ntAPPRIS ALT2 TSL 1 (best) BASIC1.78□□□□□ -2.12
UBR4Q5T4S7 MED13-201ENST00000397786 10465 ntAPPRIS P1 TSL 1 (best) BASIC1.78□□□□□ -2.12
UBR4Q5T4S7 RNA5SP289-201ENST00000362332 137 ntBASIC1.78□□□□□ -2.12
UBR4Q5T4S7 SNORD114-30-201ENST00000364448 72 ntBASIC1.78□□□□□ -2.12
UBR4Q5T4S7 MIR598-201ENST00000384868 97 ntBASIC1.78□□□□□ -2.12
UBR4Q5T4S7 LINC01828-201ENST00000445514 531 ntTSL 4 BASIC1.78□□□□□ -2.12
UBR4Q5T4S7 AC079354.3-201ENST00000447111 311 ntTSL 2 BASIC1.78□□□□□ -2.12
UBR4Q5T4S7 LINC01825-201ENST00000452381 850 ntTSL 3 BASIC1.78□□□□□ -2.12
UBR4Q5T4S7 AL024509.2-201ENST00000493462 493 ntBASIC1.78□□□□□ -2.12
UBR4Q5T4S7 ANK2-226ENST00000612754 6134 ntTSL 5 BASIC1.78□□□□□ -2.12
UBR4Q5T4S7 AC068647.1-201ENST00000489539 2265 ntBASIC1.78□□□□□ -2.12
UBR4Q5T4S7 MMP16-201ENST00000286614 11558 ntAPPRIS P1 TSL 1 (best) BASIC1.78□□□□□ -2.12
UBR4Q5T4S7 ATMIN-204ENST00000564241 4803 ntTSL 1 (best) BASIC1.78□□□□□ -2.13
UBR4Q5T4S7 LINC00301-201ENST00000320202 852 ntTSL 2 BASIC1.78□□□□□ -2.13
UBR4Q5T4S7 SNORA5.1-201ENST00000384275 131 ntBASIC1.78□□□□□ -2.13
UBR4Q5T4S7 RPS4XP2-201ENST00000458402 793 ntBASIC1.78□□□□□ -2.13
UBR4Q5T4S7 IGKV1OR2-1-201ENST00000514060 354 ntBASIC1.78□□□□□ -2.13
UBR4Q5T4S7 AC018616.1-201ENST00000524085 546 ntTSL 5 BASIC1.78□□□□□ -2.13
UBR4Q5T4S7 GABRB2-201ENST00000274547 7409 ntTSL 5 BASIC1.78□□□□□ -2.13
UBR4Q5T4S7 SLC4A10-206ENST00000446997 5551 ntAPPRIS P4 TSL 1 (best) BASIC1.78□□□□□ -2.13
UBR4Q5T4S7 HERC1-201ENST00000443617 15137 ntAPPRIS P1 TSL 1 (best) BASIC1.78□□□□□ -2.13
UBR4Q5T4S7 HUWE1-214ENST00000612484 14311 ntTSL 5 BASIC1.78□□□□□ -2.13
UBR4Q5T4S7 TMEM132B-201ENST00000299308 10906 ntAPPRIS P3 TSL 5 BASIC1.78□□□□□ -2.13
UBR4Q5T4S7 LINC00645-203ENST00000557399 3512 ntTSL 1 (best) BASIC1.78□□□□□ -2.13
UBR4Q5T4S7 MBNL1-203ENST00000324196 5225 ntTSL 5 BASIC1.77□□□□□ -2.13
UBR4Q5T4S7 AC022826.2-201ENST00000358757 776 ntAPPRIS P1 TSL 4 BASIC1.77□□□□□ -2.13
UBR4Q5T4S7 ST13P20-201ENST00000447996 1065 ntBASIC1.77□□□□□ -2.13
UBR4Q5T4S7 AP002748.2-201ENST00000528671 348 ntBASIC1.77□□□□□ -2.13
UBR4Q5T4S7 TAS2R43-201ENST00000531678 1027 ntAPPRIS P1 BASIC1.77□□□□□ -2.13
UBR4Q5T4S7 AC007536.1-201ENST00000533382 349 ntBASIC1.77□□□□□ -2.13
UBR4Q5T4S7 AL353726.1-201ENST00000614041 1000 ntBASIC1.77□□□□□ -2.13
UBR4Q5T4S7 ZNF81-204ENST00000376954 7933 ntAPPRIS P1 TSL 5 BASIC1.77□□□□□ -2.13
UBR4Q5T4S7 NDUFS1-201ENST00000233190 11819 ntAPPRIS P1 TSL 1 (best) BASIC1.77□□□□□ -2.13
UBR4Q5T4S7 ABCA12-201ENST00000272895 9100 ntAPPRIS P1 TSL 1 (best) BASIC1.77□□□□□ -2.13
UBR4Q5T4S7 AGL-206ENST00000370165 7106 ntAPPRIS P1 TSL 1 (best) BASIC1.77□□□□□ -2.13
Retrieved 100 of 98,524 protein–RNA pairs in 159.5 ms