Protein–RNA interactions for Protein: P54277

PMS1, PMS1 protein homolog 1, humanhuman

Known RBP Predictions only

Length 932 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PMS1P54277 AL589872.1-201ENST00000426602 288 ntBASIC5.64□□□□□ -1.51
PMS1P54277 AL139148.1-201ENST00000427122 680 ntBASIC5.64□□□□□ -1.51
PMS1P54277 CBX1P1-201ENST00000440184 427 ntBASIC5.64□□□□□ -1.51
PMS1P54277 RPS11P7-201ENST00000442125 465 ntBASIC5.64□□□□□ -1.51
PMS1P54277 LINC00113-203ENST00000442550 572 ntTSL 3 BASIC5.64□□□□□ -1.51
PMS1P54277 AP000542.1-201ENST00000448473 371 ntBASIC5.64□□□□□ -1.51
PMS1P54277 AC013460.1-205ENST00000450695 518 ntTSL 4 BASIC5.64□□□□□ -1.51
PMS1P54277 BX322784.1-201ENST00000455793 1077 ntBASIC5.64□□□□□ -1.51
PMS1P54277 MTND1P11-201ENST00000456661 876 ntBASIC5.64□□□□□ -1.51
PMS1P54277 AC006511.1-201ENST00000470614 315 ntBASIC5.64□□□□□ -1.51
PMS1P54277 AC091951.2-201ENST00000500762 203 ntBASIC5.64□□□□□ -1.51
PMS1P54277 RNU6-875P-201ENST00000516488 106 ntBASIC5.64□□□□□ -1.51
PMS1P54277 TRIQK-209ENST00000519969 555 ntAPPRIS P1 TSL 4 BASIC5.64□□□□□ -1.51
PMS1P54277 HGNC:24955-208ENST00000521585 1260 ntTSL 4 BASIC5.64□□□□□ -1.51
PMS1P54277 HSPA8P13-201ENST00000523715 472 ntBASIC5.64□□□□□ -1.51
PMS1P54277 AP001992.1-204ENST00000525104 687 ntTSL 3 BASIC5.64□□□□□ -1.51
PMS1P54277 CYCSP28-201ENST00000534284 321 ntBASIC5.64□□□□□ -1.51
PMS1P54277 AL512310.1-201ENST00000548639 172 ntBASIC5.64□□□□□ -1.51
PMS1P54277 LSM3P2-201ENST00000551246 273 ntBASIC5.64□□□□□ -1.51
PMS1P54277 SMARCE1P3-201ENST00000553649 1231 ntBASIC5.64□□□□□ -1.51
PMS1P54277 AC060780.3-201ENST00000589464 80 ntBASIC5.64□□□□□ -1.51
PMS1P54277 LINC01125-220ENST00000599501 965 ntAPPRIS ALT2 TSL 5 BASIC5.64□□□□□ -1.51
PMS1P54277 Z98949.1-202ENST00000600211 1282 ntTSL 5 BASIC5.64□□□□□ -1.51
PMS1P54277 PSMA6P4-201ENST00000603247 718 ntBASIC5.64□□□□□ -1.51
PMS1P54277 AC012507.3-201ENST00000603556 477 ntBASIC5.64□□□□□ -1.51
PMS1P54277 AC103792.1-201ENST00000603591 919 ntBASIC5.64□□□□□ -1.51
PMS1P54277 ACTR3BP1-201ENST00000605584 1247 ntBASIC5.64□□□□□ -1.51
PMS1P54277 AC019080.3-201ENST00000606180 444 ntTSL 5 BASIC5.64□□□□□ -1.51
PMS1P54277 RNU6-87P-201ENST00000607561 108 ntBASIC5.64□□□□□ -1.51
PMS1P54277 STARD13-AS-239ENST00000609588 982 ntTSL 5 BASIC5.64□□□□□ -1.51
PMS1P54277 TMBIM4-213ENST00000613669 851 ntTSL 5 BASIC5.64□□□□□ -1.51
PMS1P54277 WWOX-217ENST00000620008 450 ntTSL 2 BASIC5.64□□□□□ -1.51
PMS1P54277 AC012150.2-201ENST00000621300 544 ntBASIC5.64□□□□□ -1.51
PMS1P54277 Metazoa_SRP.93-201ENST00000622525 276 ntBASIC5.64□□□□□ -1.51
PMS1P54277 AC091905.1-201ENST00000624400 311 ntBASIC5.64□□□□□ -1.51
PMS1P54277 AC099654.10-201ENST00000640395 161 ntBASIC5.64□□□□□ -1.51
PMS1P54277 GABRG2-203ENST00000414552 3927 ntTSL 1 (best) BASIC5.64□□□□□ -1.51
PMS1P54277 OR8H2-201ENST00000313503 3088 ntAPPRIS P2 BASIC5.64□□□□□ -1.51
PMS1P54277 RNMT-203ENST00000543302 1849 ntAPPRIS P1 TSL 1 (best) BASIC5.64□□□□□ -1.51
PMS1P54277 DGKH-210ENST00000628433 3449 ntTSL 2 BASIC5.64□□□□□ -1.51
PMS1P54277 AL731532.2-201ENST00000623542 1953 ntBASIC5.64□□□□□ -1.51
PMS1P54277 DLC1-209ENST00000511869 2451 ntTSL 1 (best) BASIC5.64□□□□□ -1.51
PMS1P54277 ZNF850-203ENST00000614887 7625 ntAPPRIS ALT2 TSL 1 (best) BASIC5.63□□□□□ -1.51
PMS1P54277 MED13-201ENST00000397786 10465 ntAPPRIS P1 TSL 1 (best) BASIC5.63□□□□□ -1.51
PMS1P54277 FKBP7-204ENST00000424785 2834 ntAPPRIS P3 TSL 1 (best) BASIC5.63□□□□□ -1.51
PMS1P54277 THAP12P5-201ENST00000405864 2275 ntBASIC5.63□□□□□ -1.51
PMS1P54277 XPOTP1-201ENST00000443317 2398 ntBASIC5.63□□□□□ -1.51
PMS1P54277 PSD3-201ENST00000286485 6665 ntAPPRIS P3 TSL 1 (best) BASIC5.63□□□□□ -1.51
PMS1P54277 FZD6-205ENST00000522566 3719 ntAPPRIS P1 TSL 1 (best) BASIC5.63□□□□□ -1.51
PMS1P54277 TAS2R14-202ENST00000537503 1858 ntAPPRIS P1 BASIC5.63□□□□□ -1.51
PMS1P54277 GABRG2-202ENST00000361925 3767 ntTSL 3 BASIC5.63□□□□□ -1.51
PMS1P54277 AASDH-202ENST00000451613 3182 ntTSL 1 (best) BASIC5.63□□□□□ -1.51
PMS1P54277 OR2AE1-201ENST00000316368 1071 ntAPPRIS P1 BASIC5.63□□□□□ -1.51
PMS1P54277 SPAG11A-202ENST00000326625 445 ntTSL 5 BASIC5.63□□□□□ -1.51
PMS1P54277 AL031679.1-201ENST00000400616 525 ntBASIC5.63□□□□□ -1.51
PMS1P54277 RPA3-203ENST00000401447 414 ntTSL 3 BASIC5.63□□□□□ -1.51
PMS1P54277 TANK-204ENST00000403609 555 ntTSL 1 (best) BASIC5.63□□□□□ -1.51
PMS1P54277 SNORA11.5-201ENST00000408163 128 ntBASIC5.63□□□□□ -1.51
PMS1P54277 MORF4L2-205ENST00000423833 717 ntTSL 5 BASIC5.63□□□□□ -1.51
PMS1P54277 CHEK2P5-201ENST00000423877 246 ntBASIC5.63□□□□□ -1.51
PMS1P54277 AL035404.2-201ENST00000424418 304 ntTSL 3 BASIC5.63□□□□□ -1.51
PMS1P54277 NPM1P24-201ENST00000428039 894 ntBASIC5.63□□□□□ -1.51
PMS1P54277 LINC01850-201ENST00000429916 357 ntTSL 3 BASIC5.63□□□□□ -1.51
PMS1P54277 LINC00969-211ENST00000438608 525 ntTSL 5 BASIC5.63□□□□□ -1.51
PMS1P54277 AL929236.1-201ENST00000443622 518 ntTSL 3 BASIC5.63□□□□□ -1.51
PMS1P54277 AC002381.1-201ENST00000447049 280 ntBASIC5.63□□□□□ -1.51
PMS1P54277 SDCBP-205ENST00000447267 772 ntTSL 3 BASIC5.63□□□□□ -1.51
PMS1P54277 AC092001.1-201ENST00000453012 261 ntBASIC5.63□□□□□ -1.51
PMS1P54277 AL365318.1-201ENST00000453128 705 ntTSL 3 BASIC5.63□□□□□ -1.51
PMS1P54277 RPL35P6-201ENST00000490024 372 ntBASIC5.63□□□□□ -1.51
PMS1P54277 AC090453.1-201ENST00000495560 436 ntBASIC5.63□□□□□ -1.51
PMS1P54277 SSX6-203ENST00000509958 336 ntTSL 3 BASIC5.63□□□□□ -1.51
PMS1P54277 Y_RNA.693-201ENST00000516641 110 ntBASIC5.63□□□□□ -1.51
PMS1P54277 AP003469.3-201ENST00000518090 473 ntTSL 3 BASIC5.63□□□□□ -1.51
PMS1P54277 MAL2-208ENST00000523307 556 ntTSL 4 BASIC5.63□□□□□ -1.51
PMS1P54277 AP003557.1-201ENST00000531715 585 ntTSL 3 BASIC5.63□□□□□ -1.51
PMS1P54277 AL359233.1-201ENST00000554029 364 ntTSL 3 BASIC5.63□□□□□ -1.51
PMS1P54277 AC006349.1-201ENST00000555526 235 ntBASIC5.63□□□□□ -1.51
PMS1P54277 AL031600.2-201ENST00000563223 307 ntTSL 5 BASIC5.63□□□□□ -1.51
PMS1P54277 AC007922.3-201ENST00000581648 543 ntTSL 3 BASIC5.63□□□□□ -1.51
PMS1P54277 C8orf59P2-201ENST00000603441 271 ntBASIC5.63□□□□□ -1.51
PMS1P54277 TUG1_1.1-201ENST00000610654 145 ntBASIC5.63□□□□□ -1.51
PMS1P54277 ATXN3-251ENST00000617719 1074 ntTSL 5 BASIC5.63□□□□□ -1.51
PMS1P54277 AL732618.1-201ENST00000623251 301 ntBASIC5.63□□□□□ -1.51
PMS1P54277 AC135068.12-201ENST00000637370 931 ntBASIC5.63□□□□□ -1.51
PMS1P54277 AC090510.1-202ENST00000500850 2017 ntTSL 1 (best) BASIC5.63□□□□□ -1.51
PMS1P54277 SYNJ2BP-201ENST00000256366 7015 ntAPPRIS P1 TSL 1 (best) BASIC5.63□□□□□ -1.51
PMS1P54277 OFD1P9Y-201ENST00000417699 1491 ntBASIC5.63□□□□□ -1.51
PMS1P54277 C15orf54-202ENST00000625107 3078 ntTSL 1 (best) BASIC5.63□□□□□ -1.51
PMS1P54277 TPTE2-201ENST00000255310 1562 ntTSL 5 BASIC5.63□□□□□ -1.51
PMS1P54277 TMEM27-201ENST00000380342 1578 ntAPPRIS P1 TSL 1 (best) BASIC5.63□□□□□ -1.51
PMS1P54277 CEP112-204ENST00000537949 2847 ntTSL 1 (best) BASIC5.62□□□□□ -1.51
PMS1P54277 XKR4-201ENST00000327381 19880 ntAPPRIS P1 TSL 1 (best) BASIC5.62□□□□□ -1.51
PMS1P54277 VPS13C-204ENST00000395898 11012 ntAPPRIS ALT2 TSL 1 (best) BASIC5.62□□□□□ -1.51
PMS1P54277 FGF13-202ENST00000315930 19519 ntAPPRIS P1 TSL 1 (best) BASIC5.62□□□□□ -1.51
PMS1P54277 PROX1-205ENST00000498508 8498 ntAPPRIS P1 TSL 1 (best) BASIC5.62□□□□□ -1.51
PMS1P54277 RAP1GDS1-206ENST00000453712 2470 ntAPPRIS ALT1 TSL 1 (best) BASIC5.62□□□□□ -1.51
PMS1P54277 RN7SKP162-201ENST00000363605 345 ntBASIC5.62□□□□□ -1.51
PMS1P54277 Y_RNA.160-201ENST00000363677 92 ntBASIC5.62□□□□□ -1.51
PMS1P54277 SNORA2.3-201ENST00000383920 135 ntBASIC5.62□□□□□ -1.51
Retrieved 100 of 98,524 protein–RNA pairs in 114.2 ms