Protein–RNA interactions for Protein: P49662

CASP4, Caspase-4, humanhuman

Predictions only

Length 377 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CASP4P49662 FAM71D-211ENST00000612183 1790 ntAPPRIS P1 TSL 2 BASIC3.8□□□□□ -1.8
CASP4P49662 SKIL-201ENST00000259119 3057 ntAPPRIS P1 TSL 1 (best) BASIC3.8□□□□□ -1.8
CASP4P49662 FER-201ENST00000281092 12119 ntAPPRIS P1 TSL 1 (best) BASIC3.8□□□□□ -1.8
CASP4P49662 MTND5P11-201ENST00000511037 1812 ntBASIC3.79□□□□□ -1.8
CASP4P49662 NR3C1-212ENST00000504572 3389 ntAPPRIS ALT1 TSL 1 (best) BASIC3.79□□□□□ -1.8
CASP4P49662 AL365440.1-201ENST00000436135 2167 ntBASIC3.79□□□□□ -1.8
CASP4P49662 DENND2C-203ENST00000393277 4730 ntTSL 5 BASIC3.79□□□□□ -1.8
CASP4P49662 IL1RAPL2-201ENST00000344799 1290 ntTSL 5 BASIC3.79□□□□□ -1.8
CASP4P49662 C1orf146-201ENST00000370373 871 ntTSL 5 BASIC3.79□□□□□ -1.8
CASP4P49662 MRRF-203ENST00000373723 1176 ntTSL 3 BASIC3.79□□□□□ -1.8
CASP4P49662 UBE2V1P15-201ENST00000407776 448 ntBASIC3.79□□□□□ -1.8
CASP4P49662 LINC01349-201ENST00000416343 497 ntTSL 3 BASIC3.79□□□□□ -1.8
CASP4P49662 TTC3-AS1-201ENST00000424733 1097 ntTSL 1 (best) BASIC3.79□□□□□ -1.8
CASP4P49662 AC008065.1-201ENST00000428525 348 ntBASIC3.79□□□□□ -1.8
CASP4P49662 HMGN2P31-201ENST00000432430 273 ntBASIC3.79□□□□□ -1.8
CASP4P49662 AC009299.3-203ENST00000435692 1096 ntTSL 5 BASIC3.79□□□□□ -1.8
CASP4P49662 Z95327.1-201ENST00000446082 482 ntBASIC3.79□□□□□ -1.8
CASP4P49662 NEGR1-IT1-201ENST00000453121 534 ntTSL 1 (best) BASIC3.79□□□□□ -1.8
CASP4P49662 LINC00377-201ENST00000456588 657 ntTSL 5 BASIC3.79□□□□□ -1.8
CASP4P49662 AC023598.1-201ENST00000472521 361 ntBASIC3.79□□□□□ -1.8
CASP4P49662 AP000563.1-201ENST00000490865 758 ntBASIC3.79□□□□□ -1.8
CASP4P49662 AL035404.1-201ENST00000497982 568 ntBASIC3.79□□□□□ -1.8
CASP4P49662 AC096576.3-201ENST00000505528 721 ntTSL 5 BASIC3.79□□□□□ -1.8
CASP4P49662 SNX5P1-201ENST00000505757 1041 ntBASIC3.79□□□□□ -1.8
CASP4P49662 AC093903.1-201ENST00000507220 405 ntTSL 3 BASIC3.79□□□□□ -1.8
CASP4P49662 NREP-AS1-202ENST00000507222 610 ntTSL 3 BASIC3.79□□□□□ -1.8
CASP4P49662 HMGN1P15-201ENST00000513870 295 ntBASIC3.79□□□□□ -1.8
CASP4P49662 TMPRSS11BNL-205ENST00000514295 1262 ntBASIC3.79□□□□□ -1.8
CASP4P49662 AC093689.1-201ENST00000514737 246 ntTSL 5 BASIC3.79□□□□□ -1.8
CASP4P49662 AC090150.2-201ENST00000521869 815 ntTSL 3 BASIC3.79□□□□□ -1.8
CASP4P49662 AC010306.1-201ENST00000523223 1117 ntBASIC3.79□□□□□ -1.8
CASP4P49662 AP000926.4-201ENST00000527351 454 ntBASIC3.79□□□□□ -1.8
CASP4P49662 PTP4A1P6-201ENST00000531034 478 ntBASIC3.79□□□□□ -1.8
CASP4P49662 AP000442.2-202ENST00000531311 601 ntTSL 3 BASIC3.79□□□□□ -1.8
CASP4P49662 LINC02442-202ENST00000540761 382 ntTSL 2 BASIC3.79□□□□□ -1.8
CASP4P49662 AC089983.1-201ENST00000549807 701 ntTSL 3 BASIC3.79□□□□□ -1.8
CASP4P49662 AL160191.1-201ENST00000555480 566 ntTSL 4 BASIC3.79□□□□□ -1.8
CASP4P49662 AC009137.1-201ENST00000562790 260 ntTSL 3 BASIC3.79□□□□□ -1.8
CASP4P49662 AL353708.2-201ENST00000567486 447 ntTSL 3 BASIC3.79□□□□□ -1.8
CASP4P49662 CCDC178-211ENST00000581852 876 ntAPPRIS ALT2 TSL 2 BASIC3.79□□□□□ -1.8
CASP4P49662 AC090312.2-201ENST00000582687 378 ntBASIC3.79□□□□□ -1.8
CASP4P49662 AC007993.3-202ENST00000585329 725 ntTSL 5 BASIC3.79□□□□□ -1.8
CASP4P49662 KATNBL1P5-201ENST00000605015 517 ntBASIC3.79□□□□□ -1.8
CASP4P49662 AC012531.5-201ENST00000611375 151 ntBASIC3.79□□□□□ -1.8
CASP4P49662 MIR6864-201ENST00000617935 70 ntBASIC3.79□□□□□ -1.8
CASP4P49662 AC245427.3-201ENST00000632041 51 ntAPPRIS P1 BASIC3.79□□□□□ -1.8
CASP4P49662 ADGRL2-211ENST00000370730 6173 ntTSL 5 BASIC3.79□□□□□ -1.8
CASP4P49662 ANGPTL1-202ENST00000367629 2289 ntAPPRIS P1 TSL 1 (best) BASIC3.79□□□□□ -1.8
CASP4P49662 AL645937.1-201ENST00000641739 1652 ntBASIC3.78□□□□□ -1.8
CASP4P49662 IFT80-220ENST00000483465 4044 ntTSL 1 (best) BASIC3.78□□□□□ -1.8
CASP4P49662 ZFYVE16-202ENST00000505560 6599 ntAPPRIS P1 TSL 1 (best) BASIC3.78□□□□□ -1.8
CASP4P49662 MIR423-201ENST00000362201 94 ntBASIC3.78□□□□□ -1.8
CASP4P49662 OR5K3-201ENST00000383695 966 ntAPPRIS P1 BASIC3.78□□□□□ -1.8
CASP4P49662 MIR124-3-201ENST00000384866 87 ntBASIC3.78□□□□□ -1.8
CASP4P49662 EEF1E1-BLOC1S5-201ENST00000397456 768 ntAPPRIS P1 TSL 3 BASIC3.78□□□□□ -1.8
CASP4P49662 AC097717.1-228ENST00000417006 754 ntTSL 3 BASIC3.78□□□□□ -1.8
CASP4P49662 F10-AS1-201ENST00000424635 417 ntTSL 5 BASIC3.78□□□□□ -1.8
CASP4P49662 C21orf91-OT1-202ENST00000430815 717 ntTSL 5 BASIC3.78□□□□□ -1.8
CASP4P49662 AL365396.1-201ENST00000430854 671 ntBASIC3.78□□□□□ -1.8
CASP4P49662 RPL21P110-201ENST00000433345 446 ntBASIC3.78□□□□□ -1.8
CASP4P49662 AL357552.1-201ENST00000445254 415 ntBASIC3.78□□□□□ -1.8
CASP4P49662 LINC00440-201ENST00000446579 734 ntTSL 5 BASIC3.78□□□□□ -1.8
CASP4P49662 AC074327.1-201ENST00000448017 540 ntTSL 2 BASIC3.78□□□□□ -1.8
CASP4P49662 CEACAMP4-201ENST00000457676 421 ntBASIC3.78□□□□□ -1.8
CASP4P49662 ASH1L-IT1-201ENST00000458371 448 ntTSL 5 BASIC3.78□□□□□ -1.8
CASP4P49662 AP001086.1-201ENST00000494882 321 ntBASIC3.78□□□□□ -1.8
CASP4P49662 RHOBTB3-204ENST00000504179 883 ntTSL 5 BASIC3.78□□□□□ -1.8
CASP4P49662 LINC02146-201ENST00000504244 509 ntTSL 3 BASIC3.78□□□□□ -1.8
CASP4P49662 ADGRL3-AS1-204ENST00000509461 481 ntTSL 5 BASIC3.78□□□□□ -1.8
CASP4P49662 AC005351.1-201ENST00000511152 786 ntBASIC3.78□□□□□ -1.8
CASP4P49662 AC021146.1-201ENST00000511202 716 ntBASIC3.78□□□□□ -1.8
CASP4P49662 RN7SKP283-201ENST00000517197 270 ntBASIC3.78□□□□□ -1.8
CASP4P49662 IGKV2D-19-201ENST00000523346 262 ntBASIC3.78□□□□□ -1.8
CASP4P49662 AC105031.3-201ENST00000524359 616 ntTSL 3 BASIC3.78□□□□□ -1.8
CASP4P49662 AC103843.2-201ENST00000530523 682 ntBASIC3.78□□□□□ -1.8
CASP4P49662 OR5B10P-201ENST00000532869 642 ntBASIC3.78□□□□□ -1.8
CASP4P49662 AC074029.1-201ENST00000552531 1044 ntBASIC3.78□□□□□ -1.8
CASP4P49662 AC106028.2-201ENST00000555325 464 ntTSL 4 BASIC3.78□□□□□ -1.8
CASP4P49662 AP000919.1-202ENST00000581139 1264 ntBASIC3.78□□□□□ -1.8
CASP4P49662 AP003117.2-201ENST00000606010 545 ntBASIC3.78□□□□□ -1.8
CASP4P49662 AL450270.1-201ENST00000606160 391 ntBASIC3.78□□□□□ -1.8
CASP4P49662 STARD13-AS-235ENST00000609335 855 ntTSL 5 BASIC3.78□□□□□ -1.8
CASP4P49662 U6.107-201ENST00000637108 79 ntBASIC3.78□□□□□ -1.8
CASP4P49662 OR5T1-201ENST00000641368 1118 ntAPPRIS P1 BASIC3.78□□□□□ -1.8
CASP4P49662 PTPN22-207ENST00000528414 3424 ntTSL 1 (best) BASIC3.78□□□□□ -1.8
CASP4P49662 NMD3P1-201ENST00000439704 1488 ntBASIC3.78□□□□□ -1.8
CASP4P49662 ATXN3-248ENST00000558190 26812 ntAPPRIS P1 TSL 1 (best) BASIC3.78□□□□□ -1.8
CASP4P49662 D21S2088E-201ENST00000262354 1725 ntTSL 1 (best) BASIC3.78□□□□□ -1.8
CASP4P49662 AC019117.3-201ENST00000637807 3523 ntAPPRIS P1 TSL 5 BASIC3.78□□□□□ -1.8
CASP4P49662 RRAS2-202ENST00000414023 1884 ntTSL 2 BASIC3.77□□□□□ -1.81
CASP4P49662 ORC3-201ENST00000257789 2501 ntAPPRIS P3 TSL 1 (best) BASIC3.77□□□□□ -1.81
CASP4P49662 ZNF33CP-201ENST00000432492 2030 ntBASIC3.77□□□□□ -1.81
CASP4P49662 CPNE8-202ENST00000360449 1757 ntAPPRIS ALT2 TSL 2 BASIC3.77□□□□□ -1.81
CASP4P49662 LINC02516-201ENST00000563724 1771 ntTSL 2 BASIC3.77□□□□□ -1.81
CASP4P49662 CALCRL-203ENST00000410068 1984 ntAPPRIS P1 TSL 2 BASIC3.77□□□□□ -1.81
CASP4P49662 OR10A7-201ENST00000326258 951 ntAPPRIS P1 BASIC3.77□□□□□ -1.81
CASP4P49662 RNU4-35P-201ENST00000362588 141 ntBASIC3.77□□□□□ -1.81
CASP4P49662 RNA5SP391-201ENST00000363456 119 ntBASIC3.77□□□□□ -1.81
CASP4P49662 TMEM225-201ENST00000375026 1107 ntAPPRIS P2 TSL 1 (best) BASIC3.77□□□□□ -1.81
CASP4P49662 SNORD17-201ENST00000390930 237 ntBASIC3.77□□□□□ -1.81
Retrieved 100 of 98,524 protein–RNA pairs in 223.6 ms