Protein–RNA interactions for Protein: P39060

COL18A1, Collagen alpha-1(XVIII) chain, humanhuman

Predictions only

Length 1,754 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL18A1P39060 DAOA-AS1_1.1-201ENST00000613021 201 ntBASIC3.93□□□□□ -1.78
COL18A1P39060 AC007405.1-203ENST00000623667 932 ntTSL 5 BASIC3.93□□□□□ -1.78
COL18A1P39060 AC091903.1-201ENST00000624322 454 ntBASIC3.93□□□□□ -1.78
COL18A1P39060 WASF3-AS1-206ENST00000626779 381 ntTSL 5 BASIC3.93□□□□□ -1.78
COL18A1P39060 SCN1A-220ENST00000641603 12506 ntBASIC3.93□□□□□ -1.78
COL18A1P39060 MAPK10-353ENST00000641803 8483 ntAPPRIS P2 BASIC3.92□□□□□ -1.78
COL18A1P39060 USH2A-201ENST00000307340 18883 ntAPPRIS P1 TSL 1 (best) BASIC3.92□□□□□ -1.78
COL18A1P39060 OR56A5-201ENST00000340110 738 ntBASIC3.92□□□□□ -1.78
COL18A1P39060 AL158212.2-201ENST00000369391 460 ntTSL 3 BASIC3.92□□□□□ -1.78
COL18A1P39060 FAM107B-204ENST00000378465 1052 ntAPPRIS P1 TSL 2 BASIC3.92□□□□□ -1.78
COL18A1P39060 U3.42-201ENST00000408746 214 ntBASIC3.92□□□□□ -1.78
COL18A1P39060 RNU2-52P-201ENST00000410680 190 ntBASIC3.92□□□□□ -1.78
COL18A1P39060 NPM1P24-201ENST00000428039 894 ntBASIC3.92□□□□□ -1.78
COL18A1P39060 NIPA2P5-201ENST00000452282 464 ntBASIC3.92□□□□□ -1.78
COL18A1P39060 AC099550.1-201ENST00000515495 871 ntTSL 3 BASIC3.92□□□□□ -1.78
COL18A1P39060 OR4C2P-201ENST00000530855 1064 ntBASIC3.92□□□□□ -1.78
COL18A1P39060 MYRFL-202ENST00000535034 881 ntTSL 1 (best) BASIC3.92□□□□□ -1.78
COL18A1P39060 AC022166.1-201ENST00000567851 581 ntTSL 5 BASIC3.92□□□□□ -1.78
COL18A1P39060 AC010809.3-201ENST00000621310 641 ntBASIC3.92□□□□□ -1.78
COL18A1P39060 AC243829.7-201ENST00000633081 225 ntBASIC3.92□□□□□ -1.78
COL18A1P39060 C12orf45-204ENST00000552951 23529 ntAPPRIS P1 TSL 1 (best) BASIC3.92□□□□□ -1.78
COL18A1P39060 STXBP4-201ENST00000376352 15590 ntAPPRIS P1 TSL 2 BASIC3.92□□□□□ -1.78
COL18A1P39060 ACADM-203ENST00000420607 1332 ntAPPRIS ALT1 TSL 1 (best) BASIC3.92□□□□□ -1.78
COL18A1P39060 SERPINA7-201ENST00000327674 2642 ntAPPRIS P1 TSL 1 (best) BASIC3.92□□□□□ -1.78
COL18A1P39060 DMD-230ENST00000620040 13746 ntAPPRIS ALT2 TSL 5 BASIC3.92□□□□□ -1.78
COL18A1P39060 BCLAF1-205ENST00000527536 5371 ntTSL 5 BASIC3.92□□□□□ -1.78
COL18A1P39060 UGT8-202ENST00000394511 2448 ntAPPRIS P1 TSL 1 (best) BASIC3.92□□□□□ -1.78
COL18A1P39060 SPANXN4-201ENST00000370504 560 ntAPPRIS ALT2 TSL 5 BASIC3.91□□□□□ -1.78
COL18A1P39060 RPL21P40-201ENST00000428586 483 ntBASIC3.91□□□□□ -1.78
COL18A1P39060 RNU4-29P-201ENST00000515943 174 ntBASIC3.91□□□□□ -1.78
COL18A1P39060 RNU4ATAC3P-201ENST00000516699 126 ntBASIC3.91□□□□□ -1.78
COL18A1P39060 AP001636.2-201ENST00000525517 696 ntBASIC3.91□□□□□ -1.78
COL18A1P39060 AC016993.1-201ENST00000547033 1258 ntTSL 3 BASIC3.91□□□□□ -1.78
COL18A1P39060 TGIF1P1-201ENST00000558095 802 ntBASIC3.91□□□□□ -1.78
COL18A1P39060 MIR5047-201ENST00000579212 100 ntBASIC3.91□□□□□ -1.78
COL18A1P39060 RNU6-84P-201ENST00000607737 102 ntBASIC3.91□□□□□ -1.78
COL18A1P39060 AC244472.2-201ENST00000617639 406 ntAPPRIS P1 BASIC3.91□□□□□ -1.78
COL18A1P39060 RABGAP1L-205ENST00000367687 1849 ntTSL 2 BASIC3.91□□□□□ -1.78
COL18A1P39060 RTKN2-201ENST00000315289 2383 ntTSL 2 BASIC3.91□□□□□ -1.78
COL18A1P39060 OR2AT4-202ENST00000641504 8661 ntAPPRIS P1 BASIC3.91□□□□□ -1.78
COL18A1P39060 FGF13-202ENST00000315930 19519 ntAPPRIS P1 TSL 1 (best) BASIC3.91□□□□□ -1.78
COL18A1P39060 DMD-207ENST00000378677 13932 ntAPPRIS ALT2 TSL 5 BASIC3.91□□□□□ -1.78
COL18A1P39060 PCAT4-201ENST00000504263 2091 ntTSL 1 (best) BASIC3.91□□□□□ -1.78
COL18A1P39060 HERC4-201ENST00000277817 4371 ntTSL 1 (best) BASIC3.91□□□□□ -1.78
COL18A1P39060 EVI2A-202ENST00000461237 1540 ntAPPRIS ALT2 TSL 4 BASIC3.91□□□□□ -1.78
COL18A1P39060 LUZP2-208ENST00000620308 4981 ntTSL 5 BASIC3.91□□□□□ -1.78
COL18A1P39060 OR1E2-201ENST00000248384 972 ntAPPRIS P1 BASIC3.91□□□□□ -1.78
COL18A1P39060 RNU6-851P-201ENST00000384565 107 ntBASIC3.91□□□□□ -1.78
COL18A1P39060 AL035604.1-201ENST00000416481 531 ntTSL 3 BASIC3.91□□□□□ -1.78
COL18A1P39060 AL591623.2-201ENST00000449978 222 ntBASIC3.91□□□□□ -1.78
COL18A1P39060 AL365295.1-201ENST00000454942 514 ntTSL 5 BASIC3.91□□□□□ -1.78
COL18A1P39060 SNORD109B-201ENST00000458961 67 ntBASIC3.91□□□□□ -1.78
COL18A1P39060 SNORD109A-201ENST00000459128 67 ntBASIC3.91□□□□□ -1.78
COL18A1P39060 AC105036.1-201ENST00000566222 271 ntBASIC3.91□□□□□ -1.78
COL18A1P39060 LINC01862-201ENST00000593792 478 ntTSL 2 BASIC3.91□□□□□ -1.78
COL18A1P39060 AC019072.1-201ENST00000604535 1551 ntBASIC3.91□□□□□ -1.78
COL18A1P39060 AC007318.2-201ENST00000620999 243 ntBASIC3.91□□□□□ -1.78
COL18A1P39060 FOXP2-224ENST00000635534 4290 ntTSL 5 BASIC3.91□□□□□ -1.78
COL18A1P39060 AC093849.1-201ENST00000563631 2209 ntBASIC3.91□□□□□ -1.78
COL18A1P39060 SAMD9-201ENST00000379958 6852 ntAPPRIS P1 TSL 1 (best) BASIC3.91□□□□□ -1.78
COL18A1P39060 AKAP6-201ENST00000280979 15006 ntAPPRIS P1 TSL 1 (best) BASIC3.9□□□□□ -1.78
COL18A1P39060 SUPT3H-202ENST00000371459 2091 ntAPPRIS ALT2 TSL 1 (best) BASIC3.9□□□□□ -1.78
COL18A1P39060 AC015813.6-201ENST00000624409 5808 ntBASIC3.9□□□□□ -1.78
COL18A1P39060 KTN1-206ENST00000413890 4473 ntAPPRIS ALT2 TSL 5 BASIC3.9□□□□□ -1.78
COL18A1P39060 AC110754.1-201ENST00000399740 601 ntBASIC3.9□□□□□ -1.79
COL18A1P39060 AC010737.1-201ENST00000426699 559 ntTSL 2 BASIC3.9□□□□□ -1.79
COL18A1P39060 AC090505.2-201ENST00000427064 464 ntTSL 3 BASIC3.9□□□□□ -1.79
COL18A1P39060 AC093903.1-201ENST00000507220 405 ntTSL 3 BASIC3.9□□□□□ -1.79
COL18A1P39060 RNU6-237P-201ENST00000515985 71 ntBASIC3.9□□□□□ -1.79
COL18A1P39060 AC008126.1-201ENST00000549019 480 ntBASIC3.9□□□□□ -1.79
COL18A1P39060 AL049874.4-201ENST00000557593 255 ntBASIC3.9□□□□□ -1.79
COL18A1P39060 C15orf65-201ENST00000569691 729 ntAPPRIS P1 TSL 1 (best) BASIC3.9□□□□□ -1.79
COL18A1P39060 MIR4769-201ENST00000584126 77 ntBASIC3.9□□□□□ -1.79
COL18A1P39060 AC008507.1-201ENST00000587506 734 ntBASIC3.9□□□□□ -1.79
COL18A1P39060 ADGRL2-203ENST00000370713 5382 ntTSL 1 (best) BASIC3.9□□□□□ -1.79
COL18A1P39060 WWP1-201ENST00000265428 3362 ntAPPRIS P1 TSL 1 (best) BASIC3.9□□□□□ -1.79
COL18A1P39060 PREPL-207ENST00000409957 4703 ntTSL 5 BASIC3.9□□□□□ -1.79
COL18A1P39060 OR13C3-201ENST00000374781 1108 ntBASIC3.89□□□□□ -1.79
COL18A1P39060 MIR9-1-201ENST00000385198 89 ntBASIC3.89□□□□□ -1.79
COL18A1P39060 AC006150.1-201ENST00000412014 263 ntTSL 5 BASIC3.89□□□□□ -1.79
COL18A1P39060 ARL5AP4-201ENST00000430731 512 ntBASIC3.89□□□□□ -1.79
COL18A1P39060 AC092447.2-201ENST00000435487 669 ntBASIC3.89□□□□□ -1.79
COL18A1P39060 AL157359.1-201ENST00000449840 424 ntTSL 3 BASIC3.89□□□□□ -1.79
COL18A1P39060 AC114967.1-201ENST00000504890 259 ntBASIC3.89□□□□□ -1.79
COL18A1P39060 SUB1-211ENST00000512913 684 ntAPPRIS P1 TSL 2 BASIC3.89□□□□□ -1.79
COL18A1P39060 LINCR-0001-203ENST00000524047 545 ntTSL 4 BASIC3.89□□□□□ -1.79
COL18A1P39060 DSCR9-205ENST00000585273 751 ntTSL 1 (best) BASIC3.89□□□□□ -1.79
COL18A1P39060 LINC01355-202ENST00000604481 400 ntTSL 2 BASIC3.89□□□□□ -1.79
COL18A1P39060 AC112503.1-201ENST00000608436 391 ntBASIC3.89□□□□□ -1.79
COL18A1P39060 AC022509.4-201ENST00000621404 572 ntBASIC3.89□□□□□ -1.79
COL18A1P39060 OR13C3-202ENST00000641090 1108 ntAPPRIS P1 BASIC3.89□□□□□ -1.79
COL18A1P39060 D21S2088E-201ENST00000262354 1725 ntTSL 1 (best) BASIC3.89□□□□□ -1.79
COL18A1P39060 AC017002.4-201ENST00000604721 1525 ntBASIC3.89□□□□□ -1.79
COL18A1P39060 GALNT13-202ENST00000409237 2591 ntTSL 1 (best) BASIC3.89□□□□□ -1.79
COL18A1P39060 AGTPBP1-205ENST00000376083 4208 ntAPPRIS P1 TSL 1 (best) BASIC3.89□□□□□ -1.79
COL18A1P39060 RNU1-112P-201ENST00000364401 164 ntBASIC3.89□□□□□ -1.79
COL18A1P39060 AC006007.1-201ENST00000422084 672 ntTSL 2 BASIC3.89□□□□□ -1.79
COL18A1P39060 RPL21P112-201ENST00000434403 463 ntBASIC3.89□□□□□ -1.79
COL18A1P39060 TXNP1-201ENST00000441872 371 ntBASIC3.89□□□□□ -1.79
COL18A1P39060 RNA5SP217-201ENST00000515959 91 ntBASIC3.89□□□□□ -1.79
Retrieved 100 of 98,524 protein–RNA pairs in 167.2 ms