Protein–RNA interactions for Protein: P31277

HOXD11, Homeobox protein Hox-D11, humanhuman

Predicted RBP Predictions only

Length 338 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXD11P31277 MIR7109-201ENST00000613748 65 ntBASIC8.35□□□□□ -1.07
HOXD11P31277 AC132825.5-201ENST00000640603 310 ntBASIC8.35□□□□□ -1.07
HOXD11P31277 EIF5A2-201ENST00000295822 5593 ntAPPRIS P1 TSL 1 (best) BASIC8.35□□□□□ -1.07
HOXD11P31277 MYH2-201ENST00000245503 6339 ntAPPRIS P1 TSL 1 (best) BASIC8.35□□□□□ -1.07
HOXD11P31277 STAG1-202ENST00000383202 6055 ntAPPRIS P1 TSL 1 (best) BASIC8.35□□□□□ -1.07
HOXD11P31277 ZSCAN9-207ENST00000531979 1601 ntAPPRIS P3 TSL 2 BASIC8.35□□□□□ -1.07
HOXD11P31277 JAZF1-201ENST00000283928 3125 ntAPPRIS P1 TSL 1 (best) BASIC8.35□□□□□ -1.07
HOXD11P31277 NACA-216ENST00000550952 2922 ntTSL 2 BASIC8.35□□□□□ -1.07
HOXD11P31277 GRIK1-202ENST00000389124 2712 ntTSL 5 BASIC8.35□□□□□ -1.07
HOXD11P31277 AC044810.2-202ENST00000527847 2503 ntTSL 2 BASIC8.35□□□□□ -1.07
HOXD11P31277 MYO6-203ENST00000369981 8692 ntTSL 5 BASIC8.35□□□□□ -1.07
HOXD11P31277 SLCO1C1-208ENST00000545102 2868 ntTSL 2 BASIC8.35□□□□□ -1.07
HOXD11P31277 E2F8-201ENST00000250024 3240 ntAPPRIS P1 TSL 1 (best) BASIC8.35□□□□□ -1.07
HOXD11P31277 SLC38A4-202ENST00000447411 3791 ntAPPRIS P1 TSL 1 (best) BASIC8.35□□□□□ -1.07
HOXD11P31277 CEP57L1-216ENST00000521522 2259 ntTSL 5 BASIC8.34□□□□□ -1.07
HOXD11P31277 ANO2-211ENST00000546188 3702 ntAPPRIS ALT2 TSL 1 (best) BASIC8.34□□□□□ -1.07
HOXD11P31277 CDK19-201ENST00000323817 6067 ntTSL 1 (best) BASIC8.34□□□□□ -1.07
HOXD11P31277 TIAM2-208ENST00000461783 6981 ntAPPRIS P1 TSL 2 BASIC8.34□□□□□ -1.07
HOXD11P31277 PPFIA2-201ENST00000333447 5517 ntTSL 5 BASIC8.34□□□□□ -1.07
HOXD11P31277 FMN1-203ENST00000558197 4060 ntTSL 1 (best) BASIC8.34□□□□□ -1.07
HOXD11P31277 MYO6-208ENST00000627432 4074 ntTSL 5 BASIC8.34□□□□□ -1.07
HOXD11P31277 MFSD8-227ENST00000641393 4069 ntBASIC8.34□□□□□ -1.07
HOXD11P31277 GULP1-202ENST00000409580 3544 ntAPPRIS P3 TSL 2 BASIC8.34□□□□□ -1.07
HOXD11P31277 UBR4-202ENST00000375224 3475 ntTSL 2 BASIC8.34□□□□□ -1.07
HOXD11P31277 ADGRE1-201ENST00000250572 2939 ntAPPRIS ALT2 TSL 1 (best) BASIC8.34□□□□□ -1.07
HOXD11P31277 FAM47C-201ENST00000358047 3270 ntAPPRIS P1 BASIC8.34□□□□□ -1.07
HOXD11P31277 DSG1-201ENST00000257192 5045 ntAPPRIS P1 TSL 1 (best) BASIC8.34□□□□□ -1.07
HOXD11P31277 AC010886.1-201ENST00000437380 2869 ntBASIC8.34□□□□□ -1.07
HOXD11P31277 C2orf42-205ENST00000420306 2193 ntAPPRIS P1 TSL 2 BASIC8.34□□□□□ -1.07
HOXD11P31277 DIAPH3-202ENST00000377908 3549 ntAPPRIS ALT2 TSL 1 (best) BASIC8.34□□□□□ -1.07
HOXD11P31277 ZHX3-214ENST00000559234 6296 ntAPPRIS P1 TSL 1 (best) BASIC8.34□□□□□ -1.07
HOXD11P31277 AC008676.2-202ENST00000509655 1992 ntTSL 2 BASIC8.34□□□□□ -1.07
HOXD11P31277 EPB41L5-204ENST00000443902 3167 ntTSL 2 BASIC8.34□□□□□ -1.07
HOXD11P31277 AC068490.1-202ENST00000637384 3185 ntTSL 5 BASIC8.34□□□□□ -1.07
HOXD11P31277 MTERF4-222ENST00000614476 4524 ntAPPRIS P1 TSL 1 (best) BASIC8.34□□□□□ -1.07
HOXD11P31277 MT1A-201ENST00000290705 396 ntAPPRIS P1 TSL 1 (best) BASIC8.34□□□□□ -1.07
HOXD11P31277 Y_RNA.245-201ENST00000364493 95 ntBASIC8.34□□□□□ -1.07
HOXD11P31277 Y_RNA.310-201ENST00000365063 113 ntBASIC8.34□□□□□ -1.07
HOXD11P31277 RNU6-497P-201ENST00000365316 104 ntBASIC8.34□□□□□ -1.07
HOXD11P31277 FAM49A-201ENST00000381323 4670 ntAPPRIS P1 TSL 1 (best) BASIC8.34□□□□□ -1.07
HOXD11P31277 AL590762.2-201ENST00000395798 571 ntBASIC8.34□□□□□ -1.07
HOXD11P31277 REREP2Y-201ENST00000439103 200 ntBASIC8.34□□□□□ -1.07
HOXD11P31277 FP325330.1-201ENST00000457518 372 ntTSL 3 BASIC8.34□□□□□ -1.07
HOXD11P31277 AC091826.1-201ENST00000514065 313 ntBASIC8.34□□□□□ -1.07
HOXD11P31277 RNU6-857P-201ENST00000515893 110 ntBASIC8.34□□□□□ -1.07
HOXD11P31277 SLN-202ENST00000525934 436 ntAPPRIS P1 TSL 3 BASIC8.34□□□□□ -1.07
HOXD11P31277 AC007527.1-201ENST00000535528 313 ntTSL 2 BASIC8.34□□□□□ -1.07
HOXD11P31277 AL049869.4-201ENST00000555669 178 ntBASIC8.34□□□□□ -1.07
HOXD11P31277 AC021231.3-201ENST00000558497 370 ntBASIC8.34□□□□□ -1.07
HOXD11P31277 AC024614.1-201ENST00000577546 307 ntBASIC8.34□□□□□ -1.07
HOXD11P31277 PPIAL4A-201ENST00000577856 660 ntAPPRIS P1 BASIC8.34□□□□□ -1.07
HOXD11P31277 PPIAL4F-202ENST00000581138 660 ntAPPRIS P1 BASIC8.34□□□□□ -1.07
HOXD11P31277 FO393422.1-201ENST00000603908 708 ntBASIC8.34□□□□□ -1.07
HOXD11P31277 AC119619.1-201ENST00000619728 112 ntBASIC8.34□□□□□ -1.07
HOXD11P31277 TEX41-293ENST00000630451 690 ntTSL 5 BASIC8.34□□□□□ -1.07
HOXD11P31277 FOXP2-201ENST00000350908 2638 ntAPPRIS P2 TSL 1 (best) BASIC8.34□□□□□ -1.07
HOXD11P31277 USP46-202ENST00000451218 4622 ntTSL 5 BASIC8.34□□□□□ -1.07
HOXD11P31277 DDX24-205ENST00000555054 2769 ntTSL 5 BASIC8.34□□□□□ -1.07
HOXD11P31277 SLC26A5-207ENST00000393729 2422 ntTSL 5 BASIC8.34□□□□□ -1.07
HOXD11P31277 OTX2-AS1-201ENST00000534909 2428 ntTSL 1 (best) BASIC8.34□□□□□ -1.07
HOXD11P31277 IGSF1-205ENST00000370904 5413 ntAPPRIS ALT2 TSL 2 BASIC8.34□□□□□ -1.07
HOXD11P31277 AC002480.4-201ENST00000414116 2592 ntTSL 1 (best) BASIC8.34□□□□□ -1.07
HOXD11P31277 AC135012.3-201ENST00000599841 4039 ntTSL 4 BASIC8.34□□□□□ -1.07
HOXD11P31277 KIF5A-202ENST00000455537 5824 ntAPPRIS P1 TSL 1 (best) BASIC8.34□□□□□ -1.07
HOXD11P31277 LIMK2-201ENST00000331728 3670 ntAPPRIS P4 TSL 1 (best) BASIC8.34□□□□□ -1.07
HOXD11P31277 NUFIP1-201ENST00000379161 3492 ntAPPRIS P1 TSL 1 (best) BASIC8.34□□□□□ -1.07
HOXD11P31277 TRIO-214ENST00000509967 4949 ntTSL 2 BASIC8.34□□□□□ -1.07
HOXD11P31277 AC006116.1-201ENST00000587908 2171 ntBASIC8.34□□□□□ -1.08
HOXD11P31277 DENND2C-201ENST00000393274 6163 ntTSL 5 BASIC8.34□□□□□ -1.08
HOXD11P31277 ATXN3-216ENST00000545170 6950 ntTSL 5 BASIC8.34□□□□□ -1.08
HOXD11P31277 ZFHX3-201ENST00000268489 16064 ntAPPRIS P1 TSL 1 (best) BASIC8.34□□□□□ -1.08
HOXD11P31277 ALB-202ENST00000401494 1659 ntTSL 5 BASIC8.34□□□□□ -1.08
HOXD11P31277 ZNF160-214ENST00000601421 4688 ntTSL 1 (best) BASIC8.33□□□□□ -1.08
HOXD11P31277 TM4SF20-201ENST00000304568 2296 ntAPPRIS P1 TSL 1 (best) BASIC8.33□□□□□ -1.08
HOXD11P31277 MIPOL1-211ENST00000556451 2282 ntTSL 1 (best) BASIC8.33□□□□□ -1.08
HOXD11P31277 CSNK1G3-203ENST00000361991 2424 ntAPPRIS P3 TSL 1 (best) BASIC8.33□□□□□ -1.08
HOXD11P31277 ERCC6-201ENST00000355832 8008 ntAPPRIS P1 TSL 1 (best) BASIC8.33□□□□□ -1.08
HOXD11P31277 AC117382.2-201ENST00000564748 3151 ntBASIC8.33□□□□□ -1.08
HOXD11P31277 CYP4A22-202ENST00000371890 1780 ntTSL 5 BASIC8.33□□□□□ -1.08
HOXD11P31277 ZNF317-201ENST00000247956 4073 ntAPPRIS P3 TSL 1 (best) BASIC8.33□□□□□ -1.08
HOXD11P31277 AC090197.1-202ENST00000519692 4374 ntTSL 1 (best) BASIC8.33□□□□□ -1.08
HOXD11P31277 CCDC129-202ENST00000407970 3269 ntAPPRIS P3 TSL 1 (best) BASIC8.33□□□□□ -1.08
HOXD11P31277 CYLD-207ENST00000564326 3259 ntAPPRIS P1 TSL 5 BASIC8.33□□□□□ -1.08
HOXD11P31277 CACNA1C-220ENST00000399655 13433 ntAPPRIS ALT2 TSL 1 (best) BASIC8.33□□□□□ -1.08
HOXD11P31277 H3F3AP6-201ENST00000230495 411 ntBASIC8.33□□□□□ -1.08
HOXD11P31277 CTSL3P-201ENST00000354530 657 ntTSL 1 (best) BASIC8.33□□□□□ -1.08
HOXD11P31277 GAGE12B-201ENST00000361446 117 ntAPPRIS P1 BASIC8.33□□□□□ -1.08
HOXD11P31277 SNORD115-30-201ENST00000364117 82 ntBASIC8.33□□□□□ -1.08
HOXD11P31277 VTRNA1-2-201ENST00000365241 89 ntBASIC8.33□□□□□ -1.08
HOXD11P31277 Y_RNA.342-201ENST00000365352 113 ntBASIC8.33□□□□□ -1.08
HOXD11P31277 H3F3AP4-201ENST00000369387 411 ntBASIC8.33□□□□□ -1.08
HOXD11P31277 NAA40-202ENST00000377793 3664 ntAPPRIS P1 TSL 1 (best) BASIC8.33□□□□□ -1.08
HOXD11P31277 MIR1250-201ENST00000408098 113 ntBASIC8.33□□□□□ -1.08
HOXD11P31277 SNORA73.3-201ENST00000410213 189 ntBASIC8.33□□□□□ -1.08
HOXD11P31277 AP001048.1-201ENST00000436359 280 ntTSL 2 BASIC8.33□□□□□ -1.08
HOXD11P31277 RPS4XP2-201ENST00000458402 793 ntBASIC8.33□□□□□ -1.08
HOXD11P31277 AC092824.1-201ENST00000483524 576 ntBASIC8.33□□□□□ -1.08
HOXD11P31277 AC007686.1-201ENST00000488511 463 ntBASIC8.33□□□□□ -1.08
HOXD11P31277 AC111198.1-201ENST00000505575 606 ntTSL 4 BASIC8.33□□□□□ -1.08
HOXD11P31277 IGKV1-22-201ENST00000524313 326 ntBASIC8.33□□□□□ -1.08
Retrieved 100 of 98,524 protein–RNA pairs in 12.8 ms