Protein–RNA interactions for Protein: O00322

UPK1A, Uroplakin-1a, humanhuman

Predictions only

Length 258 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UPK1AO00322 AC092641.1-201ENST00000440229 772 ntBASIC3.19□□□□□ -1.9
UPK1AO00322 RPL23AP67-201ENST00000465341 474 ntBASIC3.19□□□□□ -1.9
UPK1AO00322 AC078785.3-201ENST00000476607 425 ntBASIC3.19□□□□□ -1.9
UPK1AO00322 RPL30P11-201ENST00000495304 339 ntBASIC3.19□□□□□ -1.9
UPK1AO00322 SAR1B-204ENST00000502539 708 ntTSL 5 BASIC3.19□□□□□ -1.9
UPK1AO00322 CSN1S1-203ENST00000507763 597 ntAPPRIS ALT2 TSL 5 BASIC3.19□□□□□ -1.9
UPK1AO00322 MDM4-213ENST00000507825 481 ntTSL 1 (best) BASIC3.19□□□□□ -1.9
UPK1AO00322 ADGRL3-AS1-204ENST00000509461 481 ntTSL 5 BASIC3.19□□□□□ -1.9
UPK1AO00322 AC108157.1-201ENST00000510511 539 ntBASIC3.19□□□□□ -1.9
UPK1AO00322 RNU6-889P-201ENST00000517189 103 ntBASIC3.19□□□□□ -1.9
UPK1AO00322 OR5B10P-201ENST00000532869 642 ntBASIC3.19□□□□□ -1.9
UPK1AO00322 AC020612.3-201ENST00000550644 570 ntTSL 2 BASIC3.19□□□□□ -1.9
UPK1AO00322 LINC01146-208ENST00000557355 548 ntTSL 4 BASIC3.19□□□□□ -1.9
UPK1AO00322 CCDC178-211ENST00000581852 876 ntAPPRIS ALT2 TSL 2 BASIC3.19□□□□□ -1.9
UPK1AO00322 MIR3922-201ENST00000585192 84 ntBASIC3.19□□□□□ -1.9
UPK1AO00322 APOC2-203ENST00000590360 744 ntAPPRIS P1 TSL 3 BASIC3.19□□□□□ -1.9
UPK1AO00322 PCNAP1-202ENST00000595299 752 ntBASIC3.19□□□□□ -1.9
UPK1AO00322 LINC00907-211ENST00000601948 795 ntTSL 5 BASIC3.19□□□□□ -1.9
UPK1AO00322 AC006557.5-201ENST00000603126 811 ntBASIC3.19□□□□□ -1.9
UPK1AO00322 AC012531.5-201ENST00000611375 151 ntBASIC3.19□□□□□ -1.9
UPK1AO00322 MIR8058-201ENST00000615737 89 ntBASIC3.19□□□□□ -1.9
UPK1AO00322 OR51G1-201ENST00000623849 966 ntAPPRIS P1 BASIC3.19□□□□□ -1.9
UPK1AO00322 CGA-204ENST00000627148 1010 ntAPPRIS P1 TSL 1 (best) BASIC3.19□□□□□ -1.9
UPK1AO00322 AC244258.1-201ENST00000637553 1071 ntBASIC3.19□□□□□ -1.9
UPK1AO00322 KMT2E-216ENST00000622386 1588 ntTSL 5 BASIC3.19□□□□□ -1.9
UPK1AO00322 ADGRV1-201ENST00000405460 19557 ntAPPRIS P1 TSL 1 (best) BASIC3.19□□□□□ -1.9
UPK1AO00322 AL161457.2-203ENST00000590767 2663 ntTSL 5 BASIC3.19□□□□□ -1.9
UPK1AO00322 OR6Y1-202ENST00000641282 3702 ntAPPRIS P1 BASIC3.19□□□□□ -1.9
UPK1AO00322 LINC00890-202ENST00000569275 4595 ntAPPRIS P1 TSL 1 (best) BASIC3.19□□□□□ -1.9
UPK1AO00322 SYNE1-212ENST00000423061 27436 ntAPPRIS ALT2 TSL 1 (best) BASIC3.19□□□□□ -1.9
UPK1AO00322 RAP2C-AS1-202ENST00000441399 3473 ntTSL 2 BASIC3.18□□□□□ -1.9
UPK1AO00322 RHOT1-204ENST00000394692 2960 ntTSL 2 BASIC3.18□□□□□ -1.9
UPK1AO00322 FOXP2-206ENST00000393491 6085 ntTSL 5 BASIC3.18□□□□□ -1.9
UPK1AO00322 ELL2P4-201ENST00000446870 1376 ntBASIC3.18□□□□□ -1.9
UPK1AO00322 OR52N4-201ENST00000317254 1037 ntAPPRIS P1 BASIC3.18□□□□□ -1.9
UPK1AO00322 RNU4-35P-201ENST00000362588 141 ntBASIC3.18□□□□□ -1.9
UPK1AO00322 TXN-201ENST00000374515 635 ntTSL 1 (best) BASIC3.18□□□□□ -1.9
UPK1AO00322 MIR218-2-201ENST00000385006 110 ntBASIC3.18□□□□□ -1.9
UPK1AO00322 AL445528.1-201ENST00000426330 420 ntBASIC3.18□□□□□ -1.9
UPK1AO00322 AL031429.1-201ENST00000426775 749 ntTSL 2 BASIC3.18□□□□□ -1.9
UPK1AO00322 ETF1P3-201ENST00000430422 1160 ntBASIC3.18□□□□□ -1.9
UPK1AO00322 AC091286.1-201ENST00000431233 461 ntBASIC3.18□□□□□ -1.9
UPK1AO00322 GOT2P5-201ENST00000433995 546 ntBASIC3.18□□□□□ -1.9
UPK1AO00322 AL353093.1-201ENST00000441292 436 ntBASIC3.18□□□□□ -1.9
UPK1AO00322 AC008264.1-201ENST00000447612 367 ntBASIC3.18□□□□□ -1.9
UPK1AO00322 AL020994.3-201ENST00000449126 274 ntTSL 3 BASIC3.18□□□□□ -1.9
UPK1AO00322 AC000061.1-201ENST00000456270 376 ntTSL 3 BASIC3.18□□□□□ -1.9
UPK1AO00322 LINC01753-201ENST00000458145 631 ntTSL 3 BASIC3.18□□□□□ -1.9
UPK1AO00322 TIPARP-AS1-201ENST00000463449 735 ntTSL 3 BASIC3.18□□□□□ -1.9
UPK1AO00322 RN7SL330P-201ENST00000469709 307 ntBASIC3.18□□□□□ -1.9
UPK1AO00322 HMGB1P21-201ENST00000502313 581 ntBASIC3.18□□□□□ -1.9
UPK1AO00322 AC111193.1-201ENST00000504097 155 ntBASIC3.18□□□□□ -1.9
UPK1AO00322 IGKV2-26-201ENST00000518305 343 ntBASIC3.18□□□□□ -1.9
UPK1AO00322 CTHRC1-204ENST00000520880 560 ntTSL 4 BASIC3.18□□□□□ -1.9
UPK1AO00322 C11orf65-206ENST00000529391 973 ntAPPRIS P1 TSL 2 BASIC3.18□□□□□ -1.9
UPK1AO00322 AC091814.1-201ENST00000545258 719 ntTSL 3 BASIC3.18□□□□□ -1.9
UPK1AO00322 PWRN1-202ENST00000562501 642 ntTSL 3 BASIC3.18□□□□□ -1.9
UPK1AO00322 AC023394.1-201ENST00000578673 312 ntTSL 5 BASIC3.18□□□□□ -1.9
UPK1AO00322 AC067852.4-201ENST00000590314 478 ntBASIC3.18□□□□□ -1.9
UPK1AO00322 LINC01539-206ENST00000593282 678 ntTSL 4 BASIC3.18□□□□□ -1.9
UPK1AO00322 ZNF92P3-201ENST00000596594 954 ntBASIC3.18□□□□□ -1.9
UPK1AO00322 AC006254.3-201ENST00000603353 884 ntBASIC3.18□□□□□ -1.9
UPK1AO00322 MIR6798-201ENST00000612887 67 ntBASIC3.18□□□□□ -1.9
UPK1AO00322 SATB1-AS1-226ENST00000625515 776 ntTSL 5 BASIC3.18□□□□□ -1.9
UPK1AO00322 SATB1-AS1-259ENST00000629477 853 ntTSL 5 BASIC3.18□□□□□ -1.9
UPK1AO00322 AL392088.2-201ENST00000637607 285 ntBASIC3.18□□□□□ -1.9
UPK1AO00322 P2RY13-201ENST00000325602 2764 ntAPPRIS P1 TSL 1 (best) BASIC3.18□□□□□ -1.9
UPK1AO00322 MTCO1P8-201ENST00000416914 1523 ntBASIC3.18□□□□□ -1.9
UPK1AO00322 RGPD3-202ENST00000409886 5594 ntAPPRIS P2 TSL 1 (best) BASIC3.18□□□□□ -1.9
UPK1AO00322 GBE1-205ENST00000489715 2513 ntAPPRIS ALT2 TSL 2 BASIC3.18□□□□□ -1.9
UPK1AO00322 PTPN22-207ENST00000528414 3424 ntTSL 1 (best) BASIC3.18□□□□□ -1.9
UPK1AO00322 CCDC168-201ENST00000322527 21466 ntAPPRIS P1 TSL 3 BASIC3.18□□□□□ -1.9
UPK1AO00322 AL356274.2-201ENST00000624379 3752 ntBASIC3.17□□□□□ -1.9
UPK1AO00322 IL1RL1-204ENST00000409584 2693 ntTSL 5 BASIC3.17□□□□□ -1.9
UPK1AO00322 PSG6-202ENST00000292125 1391 ntAPPRIS P3 TSL 1 (best) BASIC3.17□□□□□ -1.9
UPK1AO00322 MIR124-3-201ENST00000384866 87 ntBASIC3.17□□□□□ -1.9
UPK1AO00322 PTMAP2-201ENST00000397627 327 ntBASIC3.17□□□□□ -1.9
UPK1AO00322 AC073071.1-201ENST00000412410 388 ntTSL 3 BASIC3.17□□□□□ -1.9
UPK1AO00322 PSMA4-202ENST00000413382 1019 ntTSL 1 (best) BASIC3.17□□□□□ -1.9
UPK1AO00322 RPS29P4-201ENST00000414733 161 ntBASIC3.17□□□□□ -1.9
UPK1AO00322 AC006960.1-201ENST00000419980 153 ntBASIC3.17□□□□□ -1.9
UPK1AO00322 AC092832.1-201ENST00000422934 400 ntBASIC3.17□□□□□ -1.9
UPK1AO00322 RPL21P110-201ENST00000433345 446 ntBASIC3.17□□□□□ -1.9
UPK1AO00322 MRPS33P4-201ENST00000434892 317 ntBASIC3.17□□□□□ -1.9
UPK1AO00322 AL117341.1-201ENST00000437213 373 ntTSL 5 BASIC3.17□□□□□ -1.9
UPK1AO00322 CDC27P1-201ENST00000445384 715 ntBASIC3.17□□□□□ -1.9
UPK1AO00322 HMGB1P5-202ENST00000451497 985 ntBASIC3.17□□□□□ -1.9
UPK1AO00322 TTTY19-201ENST00000453955 269 ntTSL 1 (best) BASIC3.17□□□□□ -1.9
UPK1AO00322 AL392086.1-201ENST00000457632 299 ntTSL 3 BASIC3.17□□□□□ -1.9
UPK1AO00322 CMAHP-205ENST00000471416 1118 ntTSL 2 BASIC3.17□□□□□ -1.9
UPK1AO00322 AC104687.1-201ENST00000485829 412 ntBASIC3.17□□□□□ -1.9
UPK1AO00322 MTATP6P22-201ENST00000507369 598 ntBASIC3.17□□□□□ -1.9
UPK1AO00322 OR5H4P-201ENST00000510851 923 ntBASIC3.17□□□□□ -1.9
UPK1AO00322 GPX8-208ENST00000515370 1036 ntTSL 2 BASIC3.17□□□□□ -1.9
UPK1AO00322 HMGB1P46-201ENST00000520062 610 ntBASIC3.17□□□□□ -1.9
UPK1AO00322 AP001205.1-201ENST00000521625 449 ntTSL 3 BASIC3.17□□□□□ -1.9
UPK1AO00322 IGKV2D-19-201ENST00000523346 262 ntBASIC3.17□□□□□ -1.9
UPK1AO00322 OR4R3P-201ENST00000525084 838 ntBASIC3.17□□□□□ -1.9
UPK1AO00322 HIGD1AP10-201ENST00000527837 282 ntBASIC3.17□□□□□ -1.9
UPK1AO00322 AP002812.4-201ENST00000532139 286 ntBASIC3.17□□□□□ -1.9
Retrieved 100 of 98,524 protein–RNA pairs in 121 ms