Protein–RNA interactions for Protein: Q9NQS3

NECTIN3, Nectin-3, humanhuman

Predictions only

Length 549 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NECTIN3Q9NQS3 AL157955.1-201ENST00000554433 331 ntTSL 3 BASIC4.57□□□□□ -1.68
NECTIN3Q9NQS3 AL132712.2-201ENST00000556653 127 ntTSL 3 BASIC4.57□□□□□ -1.68
NECTIN3Q9NQS3 MIR4480-201ENST00000582492 71 ntBASIC4.57□□□□□ -1.68
NECTIN3Q9NQS3 AC015908.2-202ENST00000585243 756 ntTSL 3 BASIC4.57□□□□□ -1.68
NECTIN3Q9NQS3 ZNF540-204ENST00000586792 564 ntTSL 3 BASIC4.57□□□□□ -1.68
NECTIN3Q9NQS3 AC024592.1-202ENST00000590441 341 ntTSL 3 BASIC4.57□□□□□ -1.68
NECTIN3Q9NQS3 RPL26P30-202ENST00000602923 645 ntBASIC4.57□□□□□ -1.68
NECTIN3Q9NQS3 AC010424.2-201ENST00000607594 443 ntBASIC4.57□□□□□ -1.68
NECTIN3Q9NQS3 AC007497.1-201ENST00000610421 561 ntBASIC4.57□□□□□ -1.68
NECTIN3Q9NQS3 AC090116.1-201ENST00000615679 446 ntBASIC4.57□□□□□ -1.68
NECTIN3Q9NQS3 AC009237.17-201ENST00000618111 748 ntBASIC4.57□□□□□ -1.68
NECTIN3Q9NQS3 AC018816.2-201ENST00000621460 353 ntBASIC4.57□□□□□ -1.68
NECTIN3Q9NQS3 AP006248.2-201ENST00000623309 592 ntBASIC4.57□□□□□ -1.68
NECTIN3Q9NQS3 SAGE4P-201ENST00000442271 3381 ntBASIC4.57□□□□□ -1.68
NECTIN3Q9NQS3 C1D-201ENST00000355848 2233 ntAPPRIS P1 TSL 1 (best) BASIC4.57□□□□□ -1.68
NECTIN3Q9NQS3 SPAM1-205ENST00000439500 2220 ntAPPRIS ALT2 TSL 1 (best) BASIC4.57□□□□□ -1.68
NECTIN3Q9NQS3 NUP35-201ENST00000295119 1633 ntAPPRIS P1 TSL 1 (best) BASIC4.57□□□□□ -1.68
NECTIN3Q9NQS3 AL672167.1-205ENST00000641112 3080 ntBASIC4.57□□□□□ -1.68
NECTIN3Q9NQS3 TRIM36-209ENST00000514154 1952 ntTSL 1 (best) BASIC4.56□□□□□ -1.68
NECTIN3Q9NQS3 ZNF468-203ENST00000595646 4407 ntAPPRIS P1 TSL 1 (best) BASIC4.56□□□□□ -1.68
NECTIN3Q9NQS3 AC009643.2-201ENST00000603543 1448 ntBASIC4.56□□□□□ -1.68
NECTIN3Q9NQS3 NKRF-202ENST00000371527 3741 ntAPPRIS P1 TSL 1 (best) BASIC4.56□□□□□ -1.68
NECTIN3Q9NQS3 PATJ-213ENST00000613764 4172 ntTSL 5 BASIC4.56□□□□□ -1.68
NECTIN3Q9NQS3 IQGAP2-204ENST00000502745 3404 ntTSL 2 BASIC4.56□□□□□ -1.68
NECTIN3Q9NQS3 ADGRG4-201ENST00000370652 9820 ntAPPRIS P2 TSL 5 BASIC4.56□□□□□ -1.68
NECTIN3Q9NQS3 AC103591.2-201ENST00000265259 766 ntBASIC4.56□□□□□ -1.68
NECTIN3Q9NQS3 AC008549.2-201ENST00000333482 706 ntBASIC4.56□□□□□ -1.68
NECTIN3Q9NQS3 RN7SKP103-201ENST00000363848 320 ntBASIC4.56□□□□□ -1.68
NECTIN3Q9NQS3 TMLHE-202ENST00000369439 1248 ntTSL 1 (best) BASIC4.56□□□□□ -1.68
NECTIN3Q9NQS3 SNORA70E-201ENST00000384492 135 ntBASIC4.56□□□□□ -1.68
NECTIN3Q9NQS3 MIR153-1-201ENST00000384914 90 ntBASIC4.56□□□□□ -1.68
NECTIN3Q9NQS3 MT-TH-201ENST00000387441 69 ntBASIC4.56□□□□□ -1.68
NECTIN3Q9NQS3 AC007066.1-201ENST00000392902 381 ntBASIC4.56□□□□□ -1.68
NECTIN3Q9NQS3 SLC9B1P2-201ENST00000398120 1184 ntBASIC4.56□□□□□ -1.68
NECTIN3Q9NQS3 AL031679.1-201ENST00000400616 525 ntBASIC4.56□□□□□ -1.68
NECTIN3Q9NQS3 VN1R8P-201ENST00000407739 893 ntBASIC4.56□□□□□ -1.68
NECTIN3Q9NQS3 BMS1P17-201ENST00000413661 723 ntTSL 1 (best) BASIC4.56□□□□□ -1.68
NECTIN3Q9NQS3 AL360081.1-201ENST00000428299 555 ntBASIC4.56□□□□□ -1.68
NECTIN3Q9NQS3 AC092162.1-201ENST00000432828 434 ntBASIC4.56□□□□□ -1.68
NECTIN3Q9NQS3 AC098826.1-201ENST00000433943 471 ntBASIC4.56□□□□□ -1.68
NECTIN3Q9NQS3 AC019330.1-202ENST00000440609 504 ntTSL 4 BASIC4.56□□□□□ -1.68
NECTIN3Q9NQS3 AP000770.1-201ENST00000444123 583 ntTSL 5 BASIC4.56□□□□□ -1.68
NECTIN3Q9NQS3 AL731568.1-201ENST00000445111 434 ntTSL 2 BASIC4.56□□□□□ -1.68
NECTIN3Q9NQS3 PAXBP1P1-201ENST00000449315 447 ntBASIC4.56□□□□□ -1.68
NECTIN3Q9NQS3 RPL36AP33-201ENST00000450395 310 ntBASIC4.56□□□□□ -1.68
NECTIN3Q9NQS3 AC073486.1-201ENST00000453278 531 ntTSL 5 BASIC4.56□□□□□ -1.68
NECTIN3Q9NQS3 AURKAPS2-201ENST00000454983 333 ntBASIC4.56□□□□□ -1.68
NECTIN3Q9NQS3 AC022034.3-201ENST00000471393 478 ntBASIC4.56□□□□□ -1.68
NECTIN3Q9NQS3 AC017015.1-201ENST00000477387 286 ntBASIC4.56□□□□□ -1.68
NECTIN3Q9NQS3 AC090453.1-201ENST00000495560 436 ntBASIC4.56□□□□□ -1.68
NECTIN3Q9NQS3 AC107398.2-201ENST00000508081 601 ntTSL 5 BASIC4.56□□□□□ -1.68
NECTIN3Q9NQS3 LINC02229-201ENST00000508486 661 ntTSL 3 BASIC4.56□□□□□ -1.68
NECTIN3Q9NQS3 AC079921.1-201ENST00000509449 946 ntTSL 3 BASIC4.56□□□□□ -1.68
NECTIN3Q9NQS3 LINC02230-201ENST00000511174 301 ntTSL 5 BASIC4.56□□□□□ -1.68
NECTIN3Q9NQS3 MTND5P13-201ENST00000513046 1079 ntBASIC4.56□□□□□ -1.68
NECTIN3Q9NQS3 OR7H2P-201ENST00000513483 306 ntBASIC4.56□□□□□ -1.68
NECTIN3Q9NQS3 HIGD1AP3-201ENST00000515857 278 ntBASIC4.56□□□□□ -1.68
NECTIN3Q9NQS3 AC106038.2-201ENST00000520706 568 ntBASIC4.56□□□□□ -1.68
NECTIN3Q9NQS3 AC107909.2-201ENST00000520844 493 ntTSL 3 BASIC4.56□□□□□ -1.68
NECTIN3Q9NQS3 STX3-204ENST00000530221 534 ntTSL 5 BASIC4.56□□□□□ -1.68
NECTIN3Q9NQS3 AL139174.1-201ENST00000531489 886 ntBASIC4.56□□□□□ -1.68
NECTIN3Q9NQS3 RERG-IT1-201ENST00000539734 301 ntTSL 3 BASIC4.56□□□□□ -1.68
NECTIN3Q9NQS3 AC009511.1-201ENST00000543527 191 ntTSL 5 BASIC4.56□□□□□ -1.68
NECTIN3Q9NQS3 NOVA1-AS1-203ENST00000552101 468 ntTSL 3 BASIC4.56□□□□□ -1.68
NECTIN3Q9NQS3 CENPUP2-201ENST00000555897 1186 ntBASIC4.56□□□□□ -1.68
NECTIN3Q9NQS3 PSMB7P1-201ENST00000556349 514 ntBASIC4.56□□□□□ -1.68
NECTIN3Q9NQS3 LINC00640-203ENST00000556479 576 ntTSL 2 BASIC4.56□□□□□ -1.68
NECTIN3Q9NQS3 LINC01491-201ENST00000558434 505 ntTSL 3 BASIC4.56□□□□□ -1.68
NECTIN3Q9NQS3 ATP5J2P6-201ENST00000565203 266 ntBASIC4.56□□□□□ -1.68
NECTIN3Q9NQS3 AC011260.1-201ENST00000578420 472 ntBASIC4.56□□□□□ -1.68
NECTIN3Q9NQS3 AL121989.1-201ENST00000585888 746 ntTSL 3 BASIC4.56□□□□□ -1.68
NECTIN3Q9NQS3 NBR2-204ENST00000587322 63 ntBASIC4.56□□□□□ -1.68
NECTIN3Q9NQS3 SRD5A3-AS1-204ENST00000592823 542 ntTSL 5 BASIC4.56□□□□□ -1.68
NECTIN3Q9NQS3 BBIP1P1-201ENST00000602999 279 ntBASIC4.56□□□□□ -1.68
NECTIN3Q9NQS3 AC115286.1-201ENST00000604298 434 ntBASIC4.56□□□□□ -1.68
NECTIN3Q9NQS3 AC080013.4-201ENST00000607624 649 ntBASIC4.56□□□□□ -1.68
NECTIN3Q9NQS3 AC025588.4-201ENST00000615802 908 ntBASIC4.56□□□□□ -1.68
NECTIN3Q9NQS3 AC009704.2-201ENST00000618739 483 ntBASIC4.56□□□□□ -1.68
NECTIN3Q9NQS3 AK6-205ENST00000618980 483 ntTSL 2 BASIC4.56□□□□□ -1.68
NECTIN3Q9NQS3 LRRC3B-205ENST00000456208 1551 ntAPPRIS P1 TSL 1 (best) BASIC4.56□□□□□ -1.68
NECTIN3Q9NQS3 RGS13-201ENST00000391995 1505 ntAPPRIS P1 TSL 1 (best) BASIC4.56□□□□□ -1.68
NECTIN3Q9NQS3 DNAH8-205ENST00000449981 12940 ntTSL 5 BASIC4.56□□□□□ -1.68
NECTIN3Q9NQS3 GTDC1-206ENST00000409214 2954 ntAPPRIS P1 TSL 1 (best) BASIC4.56□□□□□ -1.68
NECTIN3Q9NQS3 PTPN12-206ENST00000435495 2526 ntTSL 2 BASIC4.55□□□□□ -1.68
NECTIN3Q9NQS3 AL356473.1-201ENST00000406203 1408 ntBASIC4.55□□□□□ -1.68
NECTIN3Q9NQS3 CPNE8-202ENST00000360449 1757 ntAPPRIS ALT2 TSL 2 BASIC4.55□□□□□ -1.68
NECTIN3Q9NQS3 EIF2AP4-201ENST00000424793 1781 ntBASIC4.55□□□□□ -1.68
NECTIN3Q9NQS3 PCDH11X-207ENST00000406881 4156 ntAPPRIS ALT2 TSL 1 (best) BASIC4.55□□□□□ -1.68
NECTIN3Q9NQS3 AC004852.2-204ENST00000614137 1370 ntTSL 1 (best) BASIC4.55□□□□□ -1.68
NECTIN3Q9NQS3 CNGA1-209ENST00000544810 2722 ntAPPRIS ALT2 TSL 5 BASIC4.55□□□□□ -1.68
NECTIN3Q9NQS3 LIPI-201ENST00000344577 1652 ntAPPRIS P2 TSL 1 (best) BASIC4.55□□□□□ -1.68
NECTIN3Q9NQS3 PPP2R5C-226ENST00000557095 1307 ntTSL 1 (best) BASIC4.55□□□□□ -1.68
NECTIN3Q9NQS3 GTDC1-202ENST00000344850 2607 ntAPPRIS P1 TSL 5 BASIC4.55□□□□□ -1.68
NECTIN3Q9NQS3 USP8-204ENST00000425032 3559 ntTSL 2 BASIC4.55□□□□□ -1.68
NECTIN3Q9NQS3 TAX1BP1-202ENST00000396319 2892 ntAPPRIS P3 TSL 1 (best) BASIC4.55□□□□□ -1.68
NECTIN3Q9NQS3 OR6C2-201ENST00000322678 939 ntAPPRIS P1 BASIC4.55□□□□□ -1.68
NECTIN3Q9NQS3 OR13G1-201ENST00000359688 1046 ntAPPRIS P1 BASIC4.55□□□□□ -1.68
NECTIN3Q9NQS3 RNU1-83P-201ENST00000363426 164 ntBASIC4.55□□□□□ -1.68
NECTIN3Q9NQS3 RNU5F-7P-201ENST00000363696 115 ntBASIC4.55□□□□□ -1.68
NECTIN3Q9NQS3 C9orf92-201ENST00000380683 359 ntAPPRIS P2 TSL 3 BASIC4.55□□□□□ -1.68
Retrieved 100 of 98,524 protein–RNA pairs in 79.8 ms