Protein–RNA interactions for Protein: Q9H9A6

LRRC40, Leucine-rich repeat-containing protein 40, humanhuman

Predictions only

Length 602 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC40Q9H9A6 AP002989.1-201ENST00000533459 562 ntTSL 4 BASIC3.76□□□□□ -1.81
LRRC40Q9H9A6 NAV2-AS3-201ENST00000534036 598 ntTSL 3 BASIC3.76□□□□□ -1.81
LRRC40Q9H9A6 RERG-IT1-201ENST00000539734 301 ntTSL 3 BASIC3.76□□□□□ -1.81
LRRC40Q9H9A6 ARL6IP1P1-201ENST00000545836 610 ntBASIC3.76□□□□□ -1.81
LRRC40Q9H9A6 AL121576.1-201ENST00000556055 276 ntBASIC3.76□□□□□ -1.81
LRRC40Q9H9A6 AL355073.1-201ENST00000560296 517 ntTSL 4 BASIC3.76□□□□□ -1.81
LRRC40Q9H9A6 ZNF192P1-203ENST00000565888 810 ntBASIC3.76□□□□□ -1.81
LRRC40Q9H9A6 ATP5F1P7-201ENST00000567330 760 ntBASIC3.76□□□□□ -1.81
LRRC40Q9H9A6 AC017100.2-201ENST00000584628 355 ntBASIC3.76□□□□□ -1.81
LRRC40Q9H9A6 AL034351.1-201ENST00000605288 668 ntBASIC3.76□□□□□ -1.81
LRRC40Q9H9A6 AC103710.3-201ENST00000608157 948 ntBASIC3.76□□□□□ -1.81
LRRC40Q9H9A6 CT45A10-202ENST00000617981 578 ntAPPRIS P1 TSL 1 (best) BASIC3.76□□□□□ -1.81
LRRC40Q9H9A6 AC073569.3-201ENST00000619055 682 ntBASIC3.76□□□□□ -1.81
LRRC40Q9H9A6 CT45A7-202ENST00000620885 578 ntAPPRIS P1 TSL 1 (best) BASIC3.76□□□□□ -1.81
LRRC40Q9H9A6 AP000553.6-201ENST00000641242 118 ntBASIC3.76□□□□□ -1.81
LRRC40Q9H9A6 ZRANB2-201ENST00000254821 2821 ntAPPRIS ALT2 TSL 1 (best) BASIC3.76□□□□□ -1.81
LRRC40Q9H9A6 AGL-205ENST00000370163 7166 ntAPPRIS P1 TSL 1 (best) BASIC3.76□□□□□ -1.81
LRRC40Q9H9A6 C2orf78-201ENST00000409561 3045 ntAPPRIS P1 TSL 2 BASIC3.76□□□□□ -1.81
LRRC40Q9H9A6 USP8P1-201ENST00000494673 3183 ntBASIC3.75□□□□□ -1.81
LRRC40Q9H9A6 WNK3-205ENST00000620763 5400 ntTSL 5 BASIC3.75□□□□□ -1.81
LRRC40Q9H9A6 FAP-214ENST00000627638 2569 ntAPPRIS ALT1 TSL 5 BASIC3.75□□□□□ -1.81
LRRC40Q9H9A6 KIF21A-203ENST00000541463 4866 ntTSL 1 (best) BASIC3.75□□□□□ -1.81
LRRC40Q9H9A6 OR5J2-201ENST00000312298 939 ntAPPRIS P1 BASIC3.75□□□□□ -1.81
LRRC40Q9H9A6 OR51A7-201ENST00000359350 1048 ntAPPRIS P1 BASIC3.75□□□□□ -1.81
LRRC40Q9H9A6 RNU6-600P-201ENST00000362524 99 ntBASIC3.75□□□□□ -1.81
LRRC40Q9H9A6 SOD2P1-201ENST00000396543 562 ntBASIC3.75□□□□□ -1.81
LRRC40Q9H9A6 IFNAR2-206ENST00000413881 710 ntTSL 5 BASIC3.75□□□□□ -1.81
LRRC40Q9H9A6 AL353801.1-201ENST00000425541 425 ntTSL 3 BASIC3.75□□□□□ -1.81
LRRC40Q9H9A6 AL590378.1-201ENST00000426818 303 ntTSL 3 BASIC3.75□□□□□ -1.81
LRRC40Q9H9A6 AC093422.3-201ENST00000428506 305 ntBASIC3.75□□□□□ -1.81
LRRC40Q9H9A6 LINC01857-201ENST00000429730 492 ntTSL 2 BASIC3.75□□□□□ -1.81
LRRC40Q9H9A6 ENOX1-AS2-201ENST00000434273 609 ntTSL 3 BASIC3.75□□□□□ -1.81
LRRC40Q9H9A6 NDUFB1P1-201ENST00000435191 180 ntBASIC3.75□□□□□ -1.81
LRRC40Q9H9A6 AC005358.1-201ENST00000445508 1143 ntTSL 1 (best) BASIC3.75□□□□□ -1.81
LRRC40Q9H9A6 MTND1P33-201ENST00000446251 917 ntBASIC3.75□□□□□ -1.81
LRRC40Q9H9A6 MTND2P3-201ENST00000452458 470 ntBASIC3.75□□□□□ -1.81
LRRC40Q9H9A6 AC022034.3-201ENST00000471393 478 ntBASIC3.75□□□□□ -1.81
LRRC40Q9H9A6 RN7SL132P-201ENST00000478131 296 ntBASIC3.75□□□□□ -1.81
LRRC40Q9H9A6 AC015724.1-201ENST00000478577 156 ntBASIC3.75□□□□□ -1.81
LRRC40Q9H9A6 AC104012.1-201ENST00000517848 719 ntTSL 3 BASIC3.75□□□□□ -1.81
LRRC40Q9H9A6 LINC02365-202ENST00000520280 607 ntTSL 3 BASIC3.75□□□□□ -1.81
LRRC40Q9H9A6 MED6-207ENST00000554963 975 ntAPPRIS ALT1 TSL 5 BASIC3.75□□□□□ -1.81
LRRC40Q9H9A6 TMEM87A-212ENST00000568432 750 ntTSL 3 BASIC3.75□□□□□ -1.81
LRRC40Q9H9A6 AC099313.1-201ENST00000568437 452 ntTSL 2 BASIC3.75□□□□□ -1.81
LRRC40Q9H9A6 AC007495.1-203ENST00000569025 888 ntTSL 5 BASIC3.75□□□□□ -1.81
LRRC40Q9H9A6 RN7SL703P-201ENST00000578485 302 ntBASIC3.75□□□□□ -1.81
LRRC40Q9H9A6 TTN-AS1-245ENST00000592182 749 ntTSL 5 BASIC3.75□□□□□ -1.81
LRRC40Q9H9A6 AC135012.2-201ENST00000600234 479 ntTSL 2 BASIC3.75□□□□□ -1.81
LRRC40Q9H9A6 OR4H6P-202ENST00000603819 340 ntBASIC3.75□□□□□ -1.81
LRRC40Q9H9A6 Z82195.1-201ENST00000604558 398 ntBASIC3.75□□□□□ -1.81
LRRC40Q9H9A6 AC090912.3-201ENST00000609775 533 ntBASIC3.75□□□□□ -1.81
LRRC40Q9H9A6 AC005156.1-201ENST00000613371 573 ntBASIC3.75□□□□□ -1.81
LRRC40Q9H9A6 SATB1-AS1-226ENST00000625515 776 ntTSL 5 BASIC3.75□□□□□ -1.81
LRRC40Q9H9A6 SCEL-202ENST00000377246 3081 ntAPPRIS ALT2 TSL 1 (best) BASIC3.75□□□□□ -1.81
LRRC40Q9H9A6 MFF-206ENST00000392059 1710 ntTSL 5 BASIC3.75□□□□□ -1.81
LRRC40Q9H9A6 TCP11X1-203ENST00000623912 1715 ntTSL 5 BASIC3.75□□□□□ -1.81
LRRC40Q9H9A6 AC004852.2-204ENST00000614137 1370 ntTSL 1 (best) BASIC3.75□□□□□ -1.81
LRRC40Q9H9A6 ZC3H14-206ENST00000406216 1341 ntTSL 3 BASIC3.74□□□□□ -1.81
LRRC40Q9H9A6 LINC02240-201ENST00000564199 1336 ntTSL 2 BASIC3.74□□□□□ -1.81
LRRC40Q9H9A6 POU1F1-202ENST00000350375 1491 ntAPPRIS P1 TSL 1 (best) BASIC3.74□□□□□ -1.81
LRRC40Q9H9A6 ATXN3-248ENST00000558190 26812 ntAPPRIS P1 TSL 1 (best) BASIC3.74□□□□□ -1.81
LRRC40Q9H9A6 CSN1S1-201ENST00000246891 985 ntAPPRIS P3 TSL 1 (best) BASIC3.74□□□□□ -1.81
LRRC40Q9H9A6 LBR-202ENST00000338179 3812 ntAPPRIS P1 TSL 5 BASIC3.74□□□□□ -1.81
LRRC40Q9H9A6 RAD17-206ENST00000358030 2648 ntTSL 1 (best) BASIC3.74□□□□□ -1.81
LRRC40Q9H9A6 SNORA7.2-201ENST00000364446 145 ntBASIC3.74□□□□□ -1.81
LRRC40Q9H9A6 TRAJ16-201ENST00000390521 60 ntAPPRIS P1 BASIC3.74□□□□□ -1.81
LRRC40Q9H9A6 RNU6-796P-201ENST00000391086 107 ntBASIC3.74□□□□□ -1.81
LRRC40Q9H9A6 HIGD1C-201ENST00000398455 371 ntAPPRIS P1 TSL 1 (best) BASIC3.74□□□□□ -1.81
LRRC40Q9H9A6 LINC01204-201ENST00000422047 639 ntTSL 3 BASIC3.74□□□□□ -1.81
LRRC40Q9H9A6 SLC8A1-AS1-205ENST00000435515 497 ntTSL 3 BASIC3.74□□□□□ -1.81
LRRC40Q9H9A6 C1orf143-201ENST00000443836 762 ntTSL 2 BASIC3.74□□□□□ -1.81
LRRC40Q9H9A6 ANKRD30BP3-201ENST00000444850 1070 ntBASIC3.74□□□□□ -1.81
LRRC40Q9H9A6 ZNF736P6Y-201ENST00000447526 1213 ntBASIC3.74□□□□□ -1.81
LRRC40Q9H9A6 NUTF2P7-201ENST00000453086 375 ntBASIC3.74□□□□□ -1.81
LRRC40Q9H9A6 LINC01312-202ENST00000456347 813 ntTSL 1 (best) BASIC3.74□□□□□ -1.81
LRRC40Q9H9A6 CFTRP1-201ENST00000456646 183 ntBASIC3.74□□□□□ -1.81
LRRC40Q9H9A6 UBDP1-202ENST00000457888 382 ntBASIC3.74□□□□□ -1.81
LRRC40Q9H9A6 AC087879.1-201ENST00000474343 374 ntBASIC3.74□□□□□ -1.81
LRRC40Q9H9A6 AC004884.2-201ENST00000476569 546 ntTSL 4 BASIC3.74□□□□□ -1.81
LRRC40Q9H9A6 AC018816.1-205ENST00000489771 509 ntTSL 2 BASIC3.74□□□□□ -1.81
LRRC40Q9H9A6 RPL23AP73-201ENST00000492507 471 ntBASIC3.74□□□□□ -1.81
LRRC40Q9H9A6 AC020900.1-201ENST00000502568 565 ntTSL 4 BASIC3.74□□□□□ -1.81
LRRC40Q9H9A6 AC010468.2-201ENST00000511981 438 ntTSL 2 BASIC3.74□□□□□ -1.81
LRRC40Q9H9A6 AC013549.2-201ENST00000526953 489 ntTSL 3 BASIC3.74□□□□□ -1.81
LRRC40Q9H9A6 RGS4-207ENST00000527809 817 ntTSL 4 BASIC3.74□□□□□ -1.81
LRRC40Q9H9A6 AC008011.1-201ENST00000545989 227 ntBASIC3.74□□□□□ -1.81
LRRC40Q9H9A6 TRAV15-201ENST00000556680 249 ntBASIC3.74□□□□□ -1.81
LRRC40Q9H9A6 LINC02520-201ENST00000570443 537 ntTSL 4 BASIC3.74□□□□□ -1.81
LRRC40Q9H9A6 MIR5187-201ENST00000583479 76 ntBASIC3.74□□□□□ -1.81
LRRC40Q9H9A6 OR4G1P-201ENST00000588632 938 ntBASIC3.74□□□□□ -1.81
LRRC40Q9H9A6 LINC01255-206ENST00000591431 441 ntTSL 5 BASIC3.74□□□□□ -1.81
LRRC40Q9H9A6 AC079880.2-201ENST00000603790 1213 ntBASIC3.74□□□□□ -1.81
LRRC40Q9H9A6 AL161616.2-201ENST00000622001 565 ntTSL 4 BASIC3.74□□□□□ -1.81
LRRC40Q9H9A6 AC010976.1-210ENST00000630740 1005 ntTSL 5 BASIC3.74□□□□□ -1.81
LRRC40Q9H9A6 AL356118.1-201ENST00000635272 1078 ntBASIC3.74□□□□□ -1.81
LRRC40Q9H9A6 ADAT2-203ENST00000606514 6651 ntTSL 1 (best) BASIC3.74□□□□□ -1.81
LRRC40Q9H9A6 FIGNL1-201ENST00000356889 3471 ntAPPRIS P1 TSL 1 (best) BASIC3.74□□□□□ -1.81
LRRC40Q9H9A6 LINC02030-201ENST00000492683 1602 ntTSL 5 BASIC3.73□□□□□ -1.81
LRRC40Q9H9A6 MCF2-210ENST00000536274 3461 ntAPPRIS ALT2 TSL 2 BASIC3.73□□□□□ -1.81
LRRC40Q9H9A6 LIPI-204ENST00000614229 1439 ntTSL 1 (best) BASIC3.73□□□□□ -1.81
Retrieved 100 of 98,524 protein–RNA pairs in 118.2 ms