Protein–RNA interactions for Protein: Q9BZ76

CNTNAP3, Contactin-associated protein-like 3, humanhuman

Predictions only

Length 1,288 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNTNAP3Q9BZ76 RAC1P3-201ENST00000416129 580 ntBASIC6.16□□□□□ -1.42
CNTNAP3Q9BZ76 AC008280.1-201ENST00000418851 412 ntBASIC6.16□□□□□ -1.42
CNTNAP3Q9BZ76 OR4K11P-201ENST00000431829 904 ntBASIC6.16□□□□□ -1.42
CNTNAP3Q9BZ76 LINC00390-201ENST00000432331 340 ntTSL 5 BASIC6.16□□□□□ -1.42
CNTNAP3Q9BZ76 AC010881.1-201ENST00000433830 235 ntBASIC6.16□□□□□ -1.42
CNTNAP3Q9BZ76 HBG2-204ENST00000444587 307 ntTSL 2 BASIC6.16□□□□□ -1.42
CNTNAP3Q9BZ76 MORC1-AS1-201ENST00000480826 564 ntTSL 2 BASIC6.16□□□□□ -1.42
CNTNAP3Q9BZ76 AC034222.1-201ENST00000494052 532 ntBASIC6.16□□□□□ -1.42
CNTNAP3Q9BZ76 AC008953.1-201ENST00000497334 318 ntBASIC6.16□□□□□ -1.42
CNTNAP3Q9BZ76 THUMPD3-AS1-215ENST00000521609 793 ntTSL 5 BASIC6.16□□□□□ -1.42
CNTNAP3Q9BZ76 AP002340.1-201ENST00000529298 285 ntTSL 3 BASIC6.16□□□□□ -1.42
CNTNAP3Q9BZ76 AP000763.2-201ENST00000540641 163 ntBASIC6.16□□□□□ -1.42
CNTNAP3Q9BZ76 RPA2P1-201ENST00000556557 721 ntBASIC6.16□□□□□ -1.42
CNTNAP3Q9BZ76 PWRN1-204ENST00000565241 480 ntTSL 2 BASIC6.16□□□□□ -1.42
CNTNAP3Q9BZ76 C16orf97-203ENST00000566314 281 ntTSL 3 BASIC6.16□□□□□ -1.42
CNTNAP3Q9BZ76 OR4K8P-201ENST00000578842 1048 ntBASIC6.16□□□□□ -1.42
CNTNAP3Q9BZ76 AC005288.1-201ENST00000582842 860 ntTSL 2 BASIC6.16□□□□□ -1.42
CNTNAP3Q9BZ76 AC012433.1-201ENST00000588916 398 ntBASIC6.16□□□□□ -1.42
CNTNAP3Q9BZ76 GMFG-212ENST00000602185 423 ntTSL 3 BASIC6.16□□□□□ -1.42
CNTNAP3Q9BZ76 LAMTOR5-207ENST00000602858 553 ntTSL 2 BASIC6.16□□□□□ -1.42
CNTNAP3Q9BZ76 AC139493.1-201ENST00000604368 397 ntBASIC6.16□□□□□ -1.42
CNTNAP3Q9BZ76 AC004832.4-201ENST00000608952 331 ntBASIC6.16□□□□□ -1.42
CNTNAP3Q9BZ76 RPSAP73-201ENST00000614820 330 ntBASIC6.16□□□□□ -1.42
CNTNAP3Q9BZ76 NBPF25P-202ENST00000619932 3827 ntTSL 2 BASIC6.16□□□□□ -1.42
CNTNAP3Q9BZ76 AL691477.1-201ENST00000624398 162 ntBASIC6.16□□□□□ -1.42
CNTNAP3Q9BZ76 ALS2CR12-207ENST00000439709 1626 ntAPPRIS ALT2 TSL 2 BASIC6.16□□□□□ -1.42
CNTNAP3Q9BZ76 RAPGEF4-214ENST00000538974 3920 ntTSL 2 BASIC6.16□□□□□ -1.42
CNTNAP3Q9BZ76 PRND-201ENST00000305817 3980 ntAPPRIS P1 TSL 1 (best) BASIC6.16□□□□□ -1.42
CNTNAP3Q9BZ76 CYP3A5-202ENST00000339843 3320 ntTSL 1 (best) BASIC6.16□□□□□ -1.42
CNTNAP3Q9BZ76 MAP3K7-201ENST00000369320 3328 ntTSL 5 BASIC6.16□□□□□ -1.42
CNTNAP3Q9BZ76 STON2-206ENST00000555447 4302 ntAPPRIS ALT2 TSL 1 (best) BASIC6.16□□□□□ -1.42
CNTNAP3Q9BZ76 TCP11X1-202ENST00000622971 1372 ntBASIC6.16□□□□□ -1.42
CNTNAP3Q9BZ76 ZNF532-223ENST00000591230 4450 ntAPPRIS P1 TSL 1 (best) BASIC6.16□□□□□ -1.42
CNTNAP3Q9BZ76 USP9YP4-201ENST00000424401 1745 ntBASIC6.16□□□□□ -1.42
CNTNAP3Q9BZ76 PPP2R5A-205ENST00000537030 1719 ntTSL 2 BASIC6.16□□□□□ -1.42
CNTNAP3Q9BZ76 ACOD1-202ENST00000449753 2097 ntAPPRIS ALT2 TSL 3 BASIC6.16□□□□□ -1.42
CNTNAP3Q9BZ76 ZNF19-206ENST00000565100 2087 ntTSL 5 BASIC6.16□□□□□ -1.42
CNTNAP3Q9BZ76 LINC02197-201ENST00000502659 2767 ntTSL 2 BASIC6.16□□□□□ -1.42
CNTNAP3Q9BZ76 LINC01963-201ENST00000562038 3148 ntBASIC6.16□□□□□ -1.42
CNTNAP3Q9BZ76 BEST3-202ENST00000330891 3532 ntAPPRIS P1 TSL 5 BASIC6.16□□□□□ -1.42
CNTNAP3Q9BZ76 CHD6-202ENST00000373222 2477 ntTSL 1 (best) BASIC6.16□□□□□ -1.42
CNTNAP3Q9BZ76 PPP2R3A-201ENST00000264977 6795 ntAPPRIS P1 TSL 1 (best) BASIC6.16□□□□□ -1.42
CNTNAP3Q9BZ76 GAS2L3-203ENST00000539410 2229 ntAPPRIS P1 TSL 2 BASIC6.15□□□□□ -1.42
CNTNAP3Q9BZ76 ZNF652-201ENST00000362063 5988 ntAPPRIS P1 TSL 1 (best) BASIC6.15□□□□□ -1.42
CNTNAP3Q9BZ76 ZNF160-202ENST00000418871 4219 ntAPPRIS P1 TSL 1 (best) BASIC6.15□□□□□ -1.42
CNTNAP3Q9BZ76 TRAT1-201ENST00000295756 1919 ntAPPRIS P1 TSL 1 (best) BASIC6.15□□□□□ -1.42
CNTNAP3Q9BZ76 OR2T7-201ENST00000641057 3463 ntAPPRIS P1 BASIC6.15□□□□□ -1.42
CNTNAP3Q9BZ76 ARHGAP32-203ENST00000524655 8194 ntTSL 1 (best) BASIC6.15□□□□□ -1.42
CNTNAP3Q9BZ76 AC005821.1-203ENST00000577270 3145 ntTSL 1 (best) BASIC6.15□□□□□ -1.42
CNTNAP3Q9BZ76 AP000866.6-201ENST00000638898 3579 ntBASIC6.15□□□□□ -1.42
CNTNAP3Q9BZ76 LARP1B-201ENST00000326639 4891 ntAPPRIS P1 TSL 5 BASIC6.15□□□□□ -1.42
CNTNAP3Q9BZ76 UVRAG-205ENST00000528420 2463 ntTSL 2 BASIC6.15□□□□□ -1.42
CNTNAP3Q9BZ76 LINC02097-201ENST00000419257 2063 ntTSL 1 (best) BASIC6.15□□□□□ -1.42
CNTNAP3Q9BZ76 OR5A2-202ENST00000641361 6655 ntAPPRIS P1 BASIC6.15□□□□□ -1.42
CNTNAP3Q9BZ76 CLEC2D-201ENST00000261339 465 ntTSL 1 (best) BASIC6.15□□□□□ -1.42
CNTNAP3Q9BZ76 OR4N5-201ENST00000333629 927 ntAPPRIS P1 BASIC6.15□□□□□ -1.42
CNTNAP3Q9BZ76 Y_RNA.26-201ENST00000362539 101 ntBASIC6.15□□□□□ -1.42
CNTNAP3Q9BZ76 RNU6-81P-201ENST00000365608 104 ntBASIC6.15□□□□□ -1.42
CNTNAP3Q9BZ76 MIR454-201ENST00000390180 115 ntBASIC6.15□□□□□ -1.42
CNTNAP3Q9BZ76 RNU6-952P-201ENST00000391164 108 ntBASIC6.15□□□□□ -1.42
CNTNAP3Q9BZ76 UBE2V1P2-201ENST00000397758 440 ntBASIC6.15□□□□□ -1.42
CNTNAP3Q9BZ76 HMGB3P7-201ENST00000400214 611 ntBASIC6.15□□□□□ -1.42
CNTNAP3Q9BZ76 AL391417.1-201ENST00000404100 426 ntBASIC6.15□□□□□ -1.42
CNTNAP3Q9BZ76 AL139824.1-201ENST00000431983 453 ntTSL 3 BASIC6.15□□□□□ -1.42
CNTNAP3Q9BZ76 AL162384.1-201ENST00000437881 499 ntTSL 2 BASIC6.15□□□□□ -1.42
CNTNAP3Q9BZ76 AL049714.1-201ENST00000466686 347 ntBASIC6.15□□□□□ -1.42
CNTNAP3Q9BZ76 COPS8P2-201ENST00000473228 627 ntBASIC6.15□□□□□ -1.42
CNTNAP3Q9BZ76 AC006463.2-201ENST00000473326 348 ntBASIC6.15□□□□□ -1.42
CNTNAP3Q9BZ76 AC016746.1-201ENST00000489557 831 ntTSL 2 BASIC6.15□□□□□ -1.42
CNTNAP3Q9BZ76 TMEM251P1-201ENST00000503717 318 ntBASIC6.15□□□□□ -1.42
CNTNAP3Q9BZ76 AC092436.1-201ENST00000506450 503 ntBASIC6.15□□□□□ -1.42
CNTNAP3Q9BZ76 EIF3KP3-201ENST00000514461 639 ntBASIC6.15□□□□□ -1.42
CNTNAP3Q9BZ76 GAPDHP62-201ENST00000515313 990 ntBASIC6.15□□□□□ -1.42
CNTNAP3Q9BZ76 RN7SKP99-201ENST00000517028 307 ntBASIC6.15□□□□□ -1.42
CNTNAP3Q9BZ76 Y_RNA.715-201ENST00000517082 110 ntBASIC6.15□□□□□ -1.42
CNTNAP3Q9BZ76 AP002754.2-201ENST00000542121 462 ntTSL 5 BASIC6.15□□□□□ -1.42
CNTNAP3Q9BZ76 HAUS8P1-201ENST00000549005 542 ntBASIC6.15□□□□□ -1.42
CNTNAP3Q9BZ76 AC087286.3-201ENST00000561409 953 ntTSL 3 BASIC6.15□□□□□ -1.42
CNTNAP3Q9BZ76 AC113418.1-201ENST00000569928 517 ntTSL 1 (best) BASIC6.15□□□□□ -1.42
CNTNAP3Q9BZ76 AC002115.1-201ENST00000589603 568 ntTSL 4 BASIC6.15□□□□□ -1.42
CNTNAP3Q9BZ76 LINC01198-204ENST00000594153 552 ntTSL 3 BASIC6.15□□□□□ -1.42
CNTNAP3Q9BZ76 AL512329.2-201ENST00000607350 548 ntBASIC6.15□□□□□ -1.42
CNTNAP3Q9BZ76 MIR378J-201ENST00000611988 109 ntBASIC6.15□□□□□ -1.42
CNTNAP3Q9BZ76 DLEU2_5.1-201ENST00000615567 84 ntBASIC6.15□□□□□ -1.42
CNTNAP3Q9BZ76 IGLV10-54-202ENST00000640991 351 ntTSL 5 BASIC6.15□□□□□ -1.42
CNTNAP3Q9BZ76 CRISP1-201ENST00000329411 1709 ntTSL 5 BASIC6.15□□□□□ -1.42
CNTNAP3Q9BZ76 PDZRN4-203ENST00000539469 3041 ntTSL 1 (best) BASIC6.15□□□□□ -1.43
CNTNAP3Q9BZ76 ARHGAP20-205ENST00000529591 2623 ntTSL 1 (best) BASIC6.15□□□□□ -1.43
CNTNAP3Q9BZ76 ZNF227-213ENST00000621083 3055 ntAPPRIS P1 TSL 2 BASIC6.15□□□□□ -1.43
CNTNAP3Q9BZ76 AC091534.1-201ENST00000548779 1751 ntTSL 2 BASIC6.15□□□□□ -1.43
CNTNAP3Q9BZ76 CACNB4-223ENST00000636380 1756 ntTSL 5 BASIC6.15□□□□□ -1.43
CNTNAP3Q9BZ76 SATL1-202ENST00000509231 2224 ntTSL 1 (best) BASIC6.15□□□□□ -1.43
CNTNAP3Q9BZ76 SPINK5-202ENST00000359874 3656 ntAPPRIS ALT2 TSL 1 (best) BASIC6.15□□□□□ -1.43
CNTNAP3Q9BZ76 RPGRIP1L-205ENST00000563746 4193 ntTSL 1 (best) BASIC6.15□□□□□ -1.43
CNTNAP3Q9BZ76 OR9Q2-202ENST00000641291 3774 ntAPPRIS P1 BASIC6.15□□□□□ -1.43
CNTNAP3Q9BZ76 HMGCS2-204ENST00000544913 1925 ntTSL 2 BASIC6.15□□□□□ -1.43
CNTNAP3Q9BZ76 OR13C1P-202ENST00000641378 2919 ntBASIC6.15□□□□□ -1.43
CNTNAP3Q9BZ76 CACNA1E-204ENST00000367567 14757 ntAPPRIS ALT2 TSL 5 BASIC6.15□□□□□ -1.43
CNTNAP3Q9BZ76 GABRB2-209ENST00000612710 2470 ntTSL 1 (best) BASIC6.15□□□□□ -1.43
CNTNAP3Q9BZ76 LRRTM4-205ENST00000409911 2976 ntAPPRIS ALT1 TSL 5 BASIC6.15□□□□□ -1.43
Retrieved 100 of 98,524 protein–RNA pairs in 85.6 ms