Protein–RNA interactions for Protein: P53384

NUBP1, Cytosolic Fe-S cluster assembly factor NUBP1, humanhuman

Predictions only

Length 320 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NUBP1P53384 CSTF2T-201ENST00000331173 4105 ntAPPRIS P1 BASIC7.35□□□□□ -1.23
NUBP1P53384 Y_RNA.33-201ENST00000362591 102 ntBASIC7.35□□□□□ -1.23
NUBP1P53384 RNA5SP232-201ENST00000364144 119 ntBASIC7.35□□□□□ -1.23
NUBP1P53384 RN7SKP237-201ENST00000364663 301 ntBASIC7.35□□□□□ -1.23
NUBP1P53384 RNU4-56P-201ENST00000364700 142 ntBASIC7.35□□□□□ -1.23
NUBP1P53384 MIR152-201ENST00000385212 87 ntBASIC7.35□□□□□ -1.23
NUBP1P53384 AL450468.1-201ENST00000415166 450 ntTSL 3 BASIC7.35□□□□□ -1.23
NUBP1P53384 LINC02522-201ENST00000431401 256 ntTSL 3 BASIC7.35□□□□□ -1.23
NUBP1P53384 GAPDHP25-201ENST00000447061 1001 ntBASIC7.35□□□□□ -1.23
NUBP1P53384 PDCD5P2-201ENST00000507570 312 ntBASIC7.35□□□□□ -1.23
NUBP1P53384 APOOP4-201ENST00000513530 597 ntBASIC7.35□□□□□ -1.23
NUBP1P53384 GMPSP1-201ENST00000514075 579 ntBASIC7.35□□□□□ -1.23
NUBP1P53384 RNA5SP272-201ENST00000516095 111 ntBASIC7.35□□□□□ -1.23
NUBP1P53384 AP004609.2-201ENST00000532177 190 ntBASIC7.35□□□□□ -1.23
NUBP1P53384 AC117373.1-201ENST00000544036 392 ntTSL 3 BASIC7.35□□□□□ -1.23
NUBP1P53384 AF123462.1-201ENST00000554307 446 ntTSL 3 BASIC7.35□□□□□ -1.23
NUBP1P53384 NDUFA3P4-201ENST00000560814 250 ntBASIC7.35□□□□□ -1.23
NUBP1P53384 EEF1B2P1-201ENST00000567221 672 ntBASIC7.35□□□□□ -1.23
NUBP1P53384 AC211486.2-201ENST00000576046 280 ntTSL 3 BASIC7.35□□□□□ -1.23
NUBP1P53384 LINC01906-201ENST00000582962 499 ntTSL 4 BASIC7.35□□□□□ -1.23
NUBP1P53384 MIR4428-201ENST00000584884 73 ntBASIC7.35□□□□□ -1.23
NUBP1P53384 AC053481.5-201ENST00000602932 397 ntAPPRIS P1 TSL 5 BASIC7.35□□□□□ -1.23
NUBP1P53384 AL139395.1-201ENST00000603662 160 ntBASIC7.35□□□□□ -1.23
NUBP1P53384 5_8S_rRNA.1-201ENST00000614365 152 ntBASIC7.35□□□□□ -1.23
NUBP1P53384 HYKK-206ENST00000569878 4097 ntAPPRIS P1 TSL 5 BASIC7.35□□□□□ -1.23
NUBP1P53384 SSPO-201ENST00000378016 15589 ntAPPRIS P1 TSL 5 BASIC7.35□□□□□ -1.23
NUBP1P53384 ZNF708-201ENST00000356929 4004 ntAPPRIS P1 TSL 2 BASIC7.35□□□□□ -1.23
NUBP1P53384 NIPA1-202ENST00000437912 7613 ntAPPRIS ALT2 TSL 1 (best) BASIC7.35□□□□□ -1.23
NUBP1P53384 OR6C75-202ENST00000641576 4569 ntAPPRIS P1 BASIC7.35□□□□□ -1.23
NUBP1P53384 ERCC4-201ENST00000311895 6758 ntAPPRIS P1 TSL 1 (best) BASIC7.35□□□□□ -1.23
NUBP1P53384 AC005520.1-201ENST00000556551 3695 ntAPPRIS P1 TSL 2 BASIC7.35□□□□□ -1.23
NUBP1P53384 MGC4859-201ENST00000634803 3118 ntTSL 1 (best) BASIC7.35□□□□□ -1.23
NUBP1P53384 KIF6-202ENST00000287152 9082 ntAPPRIS P1 TSL 2 BASIC7.35□□□□□ -1.23
NUBP1P53384 MAK-202ENST00000354489 3941 ntTSL 5 BASIC7.35□□□□□ -1.23
NUBP1P53384 SLC36A3-201ENST00000335230 2456 ntAPPRIS P1 TSL 1 (best) BASIC7.35□□□□□ -1.23
NUBP1P53384 MAPK10-354ENST00000641823 2732 ntBASIC7.35□□□□□ -1.23
NUBP1P53384 UBQLN3-201ENST00000311659 2407 ntAPPRIS P1 TSL 1 (best) BASIC7.35□□□□□ -1.23
NUBP1P53384 LY75-CD302-202ENST00000505052 5482 ntAPPRIS ALT2 TSL 2 BASIC7.34□□□□□ -1.23
NUBP1P53384 OR51E1-202ENST00000530215 2942 ntBASIC7.34□□□□□ -1.23
NUBP1P53384 CDC40-203ENST00000368932 3933 ntAPPRIS P1 TSL 5 BASIC7.34□□□□□ -1.23
NUBP1P53384 AL161891.1-201ENST00000621575 4636 ntBASIC7.34□□□□□ -1.23
NUBP1P53384 PBRM1-203ENST00000356770 7523 ntAPPRIS ALT1 TSL 1 (best) BASIC7.34□□□□□ -1.23
NUBP1P53384 AC097461.1-201ENST00000568928 2821 ntBASIC7.34□□□□□ -1.23
NUBP1P53384 HERC3-201ENST00000264345 4764 ntAPPRIS P1 TSL 1 (best) BASIC7.34□□□□□ -1.23
NUBP1P53384 WDPCP-202ENST00000398544 2063 ntAPPRIS ALT2 TSL 1 (best) BASIC7.34□□□□□ -1.23
NUBP1P53384 ZNF215-202ENST00000414517 3257 ntAPPRIS P1 TSL 5 BASIC7.34□□□□□ -1.23
NUBP1P53384 DPY19L3-205ENST00000586987 5925 ntTSL 5 BASIC7.34□□□□□ -1.23
NUBP1P53384 MAP9-201ENST00000311277 7333 ntAPPRIS P1 TSL 1 (best) BASIC7.34□□□□□ -1.23
NUBP1P53384 ZNF462-204ENST00000441147 4691 ntTSL 1 (best) BASIC7.34□□□□□ -1.23
NUBP1P53384 AC012618.3-201ENST00000415793 2042 ntTSL 5 BASIC7.34□□□□□ -1.23
NUBP1P53384 ZMYND11-217ENST00000627286 3914 ntTSL 5 BASIC7.34□□□□□ -1.23
NUBP1P53384 DIEXF-202ENST00000491415 8446 ntAPPRIS P1 TSL 1 (best) BASIC7.34□□□□□ -1.23
NUBP1P53384 AC113615.1-201ENST00000507424 4121 ntTSL 2 BASIC7.34□□□□□ -1.23
NUBP1P53384 LINC01091-204ENST00000515769 2204 ntTSL 1 (best) BASIC7.34□□□□□ -1.23
NUBP1P53384 SNORA64.3-201ENST00000365647 134 ntBASIC7.34□□□□□ -1.23
NUBP1P53384 MIR539-201ENST00000365690 78 ntBASIC7.34□□□□□ -1.23
NUBP1P53384 SNORA70G-201ENST00000383923 142 ntBASIC7.34□□□□□ -1.23
NUBP1P53384 RNU2-43P-201ENST00000410306 190 ntBASIC7.34□□□□□ -1.23
NUBP1P53384 RNA5SP115-201ENST00000411160 107 ntBASIC7.34□□□□□ -1.23
NUBP1P53384 AL592148.1-201ENST00000413568 445 ntBASIC7.34□□□□□ -1.23
NUBP1P53384 NUCB1-AS1-201ENST00000416432 433 ntTSL 2 BASIC7.34□□□□□ -1.23
NUBP1P53384 LAMTOR3P1-201ENST00000428620 370 ntBASIC7.34□□□□□ -1.23
NUBP1P53384 AC092811.1-201ENST00000428642 397 ntTSL 3 BASIC7.34□□□□□ -1.23
NUBP1P53384 AC009988.1-201ENST00000434988 310 ntTSL 5 BASIC7.34□□□□□ -1.23
NUBP1P53384 GAPDHP53-201ENST00000458397 924 ntBASIC7.34□□□□□ -1.23
NUBP1P53384 RPS29P27-201ENST00000463711 170 ntBASIC7.34□□□□□ -1.23
NUBP1P53384 RN7SL799P-201ENST00000475891 298 ntBASIC7.34□□□□□ -1.23
NUBP1P53384 LNX1-AS1-202ENST00000510785 550 ntTSL 2 BASIC7.34□□□□□ -1.23
NUBP1P53384 RNU6-971P-201ENST00000516920 106 ntBASIC7.34□□□□□ -1.23
NUBP1P53384 RN7SKP98-201ENST00000517070 156 ntBASIC7.34□□□□□ -1.23
NUBP1P53384 NDST1-AS1-201ENST00000519040 368 ntTSL 2 BASIC7.34□□□□□ -1.23
NUBP1P53384 IGHVIII-26-1-201ENST00000520387 250 ntBASIC7.34□□□□□ -1.23
NUBP1P53384 AC025871.1-201ENST00000523935 443 ntTSL 2 BASIC7.34□□□□□ -1.23
NUBP1P53384 AC008489.1-201ENST00000524271 483 ntBASIC7.34□□□□□ -1.23
NUBP1P53384 LINC02350-201ENST00000544419 480 ntTSL 3 BASIC7.34□□□□□ -1.23
NUBP1P53384 AC138360.1-201ENST00000552332 386 ntTSL 3 BASIC7.34□□□□□ -1.23
NUBP1P53384 MIR4470-201ENST00000583453 72 ntBASIC7.34□□□□□ -1.23
NUBP1P53384 AP001178.1-201ENST00000584679 268 ntTSL 3 BASIC7.34□□□□□ -1.23
NUBP1P53384 MIR4443-201ENST00000585052 53 ntBASIC7.34□□□□□ -1.23
NUBP1P53384 RPSAP66-201ENST00000592196 606 ntBASIC7.34□□□□□ -1.23
NUBP1P53384 RPS11-205ENST00000599561 430 ntTSL 5 BASIC7.34□□□□□ -1.23
NUBP1P53384 MIR663AHG-231ENST00000609044 590 ntTSL 5 BASIC7.34□□□□□ -1.23
NUBP1P53384 AL390037.1-201ENST00000610918 431 ntTSL 3 BASIC7.34□□□□□ -1.23
NUBP1P53384 AC007993.1-201ENST00000621298 2430 ntBASIC7.34□□□□□ -1.23
NUBP1P53384 RBM23-203ENST00000359890 10040 ntAPPRIS P4 TSL 1 (best) BASIC7.34□□□□□ -1.23
NUBP1P53384 SLC5A1-201ENST00000266088 5061 ntAPPRIS P1 TSL 1 (best) BASIC7.34□□□□□ -1.23
NUBP1P53384 TTC6-201ENST00000267368 1681 ntTSL 5 BASIC7.34□□□□□ -1.23
NUBP1P53384 CCT5-201ENST00000280326 3675 ntAPPRIS P1 TSL 1 (best) BASIC7.34□□□□□ -1.23
NUBP1P53384 ATG2B-202ENST00000359933 13684 ntAPPRIS P1 TSL 5 BASIC7.34□□□□□ -1.23
NUBP1P53384 IL18RAP-202ENST00000409369 1890 ntTSL 1 (best) BASIC7.34□□□□□ -1.23
NUBP1P53384 AC132825.4-201ENST00000582527 3644 ntBASIC7.34□□□□□ -1.23
NUBP1P53384 ARPP21-221ENST00000444190 3182 ntTSL 1 (best) BASIC7.34□□□□□ -1.23
NUBP1P53384 LINC01478-201ENST00000587877 2068 ntTSL 1 (best) BASIC7.34□□□□□ -1.23
NUBP1P53384 APOL3-202ENST00000361710 3563 ntTSL 1 (best) BASIC7.34□□□□□ -1.24
NUBP1P53384 AC140479.2-201ENST00000421567 3130 ntBASIC7.34□□□□□ -1.24
NUBP1P53384 MMP8-201ENST00000236826 3056 ntAPPRIS P1 TSL 1 (best) BASIC7.33□□□□□ -1.24
NUBP1P53384 CD180-201ENST00000256447 5388 ntAPPRIS P1 TSL 1 (best) BASIC7.33□□□□□ -1.24
NUBP1P53384 EVI2B-201ENST00000330927 1999 ntAPPRIS P1 TSL 1 (best) BASIC7.33□□□□□ -1.24
NUBP1P53384 TMEM71-210ENST00000523829 1974 ntAPPRIS ALT2 TSL 5 BASIC7.33□□□□□ -1.24
NUBP1P53384 VN1R1-201ENST00000321039 2353 ntAPPRIS P1 BASIC7.33□□□□□ -1.24
Retrieved 100 of 98,524 protein–RNA pairs in 117.7 ms