Protein–RNA interactions for Protein: P48065

SLC6A12, Sodium- and chloride-dependent betaine transporter, humanhuman

Predictions only

Length 614 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC6A12P48065 SNORA60-201ENST00000362396 134 ntBASIC3.94□□□□□ -1.78
SLC6A12P48065 CNIH4-201ENST00000366856 808 ntAPPRIS ALT1 TSL 2 BASIC3.94□□□□□ -1.78
SLC6A12P48065 PRIM2-202ENST00000370687 909 ntTSL 3 BASIC3.94□□□□□ -1.78
SLC6A12P48065 SNORD116-12-201ENST00000384468 92 ntBASIC3.94□□□□□ -1.78
SLC6A12P48065 AC093159.1-201ENST00000416845 424 ntTSL 3 BASIC3.94□□□□□ -1.78
SLC6A12P48065 RPS24P7-201ENST00000416921 246 ntBASIC3.94□□□□□ -1.78
SLC6A12P48065 RPL23AP38-201ENST00000423801 469 ntBASIC3.94□□□□□ -1.78
SLC6A12P48065 LINC01934-202ENST00000424170 686 ntTSL 4 BASIC3.94□□□□□ -1.78
SLC6A12P48065 AC011742.1-201ENST00000431448 434 ntBASIC3.94□□□□□ -1.78
SLC6A12P48065 AL590502.1-201ENST00000433019 505 ntTSL 2 BASIC3.94□□□□□ -1.78
SLC6A12P48065 HMGB1P45-201ENST00000435986 653 ntBASIC3.94□□□□□ -1.78
SLC6A12P48065 YWHAZP8-201ENST00000436935 731 ntBASIC3.94□□□□□ -1.78
SLC6A12P48065 LINC01052-201ENST00000437777 496 ntTSL 3 BASIC3.94□□□□□ -1.78
SLC6A12P48065 MTCYBP31-201ENST00000438855 1122 ntBASIC3.94□□□□□ -1.78
SLC6A12P48065 RPS4XP4-201ENST00000443195 763 ntBASIC3.94□□□□□ -1.78
SLC6A12P48065 AL929288.2-201ENST00000446368 407 ntBASIC3.94□□□□□ -1.78
SLC6A12P48065 AC010618.1-201ENST00000469924 477 ntBASIC3.94□□□□□ -1.78
SLC6A12P48065 PTP4A2-203ENST00000470404 575 ntTSL 3 BASIC3.94□□□□□ -1.78
SLC6A12P48065 AC103987.1-201ENST00000473394 348 ntBASIC3.94□□□□□ -1.78
SLC6A12P48065 RPL29-203ENST00000475248 551 ntAPPRIS P1 TSL 3 BASIC3.94□□□□□ -1.78
SLC6A12P48065 RN7SL271P-201ENST00000487601 295 ntBASIC3.94□□□□□ -1.78
SLC6A12P48065 LINC02049-201ENST00000490647 747 ntTSL 1 (best) BASIC3.94□□□□□ -1.78
SLC6A12P48065 AC097478.1-204ENST00000509723 547 ntTSL 3 BASIC3.94□□□□□ -1.78
SLC6A12P48065 AC093297.1-201ENST00000511712 591 ntTSL 4 BASIC3.94□□□□□ -1.78
SLC6A12P48065 PRELID3BP4-201ENST00000515476 571 ntBASIC3.94□□□□□ -1.78
SLC6A12P48065 SOD1P3-201ENST00000518682 454 ntBASIC3.94□□□□□ -1.78
SLC6A12P48065 LINC02143-201ENST00000519929 520 ntTSL 3 BASIC3.94□□□□□ -1.78
SLC6A12P48065 AF181450.1-201ENST00000522980 410 ntTSL 3 BASIC3.94□□□□□ -1.78
SLC6A12P48065 UBTFL10-201ENST00000528532 562 ntBASIC3.94□□□□□ -1.78
SLC6A12P48065 AC124293.1-201ENST00000530034 493 ntBASIC3.94□□□□□ -1.78
SLC6A12P48065 LRRC6P1-201ENST00000532188 885 ntBASIC3.94□□□□□ -1.78
SLC6A12P48065 MTCO2P15-201ENST00000532655 656 ntBASIC3.94□□□□□ -1.78
SLC6A12P48065 OR8L1P-201ENST00000534005 955 ntBASIC3.94□□□□□ -1.78
SLC6A12P48065 PRB1-204ENST00000546254 1170 ntAPPRIS ALT2 TSL 5 BASIC3.94□□□□□ -1.78
SLC6A12P48065 AL132780.1-201ENST00000548819 556 ntTSL 4 BASIC3.94□□□□□ -1.78
SLC6A12P48065 AC009803.2-201ENST00000550378 665 ntTSL 5 BASIC3.94□□□□□ -1.78
SLC6A12P48065 GALP-203ENST00000590002 150 ntTSL 1 (best) BASIC3.94□□□□□ -1.78
SLC6A12P48065 ZNF616-203ENST00000597013 577 ntTSL 4 BASIC3.94□□□□□ -1.78
SLC6A12P48065 RNA5SP108-201ENST00000605921 117 ntBASIC3.94□□□□□ -1.78
SLC6A12P48065 AL662844.3-201ENST00000606909 517 ntTSL 5 BASIC3.94□□□□□ -1.78
SLC6A12P48065 AC092653.1-201ENST00000608509 531 ntBASIC3.94□□□□□ -1.78
SLC6A12P48065 VN1R7P-201ENST00000619242 903 ntBASIC3.94□□□□□ -1.78
SLC6A12P48065 AC244472.1-201ENST00000620773 347 ntAPPRIS P1 BASIC3.94□□□□□ -1.78
SLC6A12P48065 AP003485.2-201ENST00000623636 610 ntBASIC3.94□□□□□ -1.78
SLC6A12P48065 CD80-201ENST00000264246 2725 ntAPPRIS P1 TSL 1 (best) BASIC3.94□□□□□ -1.78
SLC6A12P48065 POSTN-202ENST00000379743 3196 ntTSL 1 (best) BASIC3.94□□□□□ -1.78
SLC6A12P48065 LINC01902-202ENST00000636983 4607 ntTSL 5 BASIC3.94□□□□□ -1.78
SLC6A12P48065 PRKAA2-202ENST00000610361 9280 ntAPPRIS ALT1 TSL 5 BASIC3.94□□□□□ -1.78
SLC6A12P48065 TJP1-204ENST00000400011 6764 ntAPPRIS ALT2 TSL 1 (best) BASIC3.94□□□□□ -1.78
SLC6A12P48065 GDAP2-202ENST00000369443 8828 ntAPPRIS P1 TSL 2 BASIC3.94□□□□□ -1.78
SLC6A12P48065 PANK1-203ENST00000342512 2703 ntAPPRIS P1 TSL 1 (best) BASIC3.93□□□□□ -1.78
SLC6A12P48065 AL133412.1-201ENST00000380194 2992 ntBASIC3.93□□□□□ -1.78
SLC6A12P48065 SPATA31D2P-201ENST00000429999 4388 ntBASIC3.93□□□□□ -1.78
SLC6A12P48065 CRISP3-201ENST00000263045 2170 ntAPPRIS P3 TSL 1 (best) BASIC3.93□□□□□ -1.78
SLC6A12P48065 YWHAZ-201ENST00000353245 2829 ntAPPRIS P1 TSL 1 (best) BASIC3.93□□□□□ -1.78
SLC6A12P48065 CFTR-201ENST00000003084 6132 ntAPPRIS P1 TSL 1 (best) BASIC3.93□□□□□ -1.78
SLC6A12P48065 NTS-201ENST00000256010 1237 ntAPPRIS P1 TSL 1 (best) BASIC3.93□□□□□ -1.78
SLC6A12P48065 IL21-201ENST00000264497 629 ntAPPRIS P3 TSL 1 (best) BASIC3.93□□□□□ -1.78
SLC6A12P48065 LINC02384-201ENST00000360485 471 ntTSL 5 BASIC3.93□□□□□ -1.78
SLC6A12P48065 MLLT3-201ENST00000380321 708 ntTSL 3 BASIC3.93□□□□□ -1.78
SLC6A12P48065 RNU6-224P-201ENST00000384055 107 ntBASIC3.93□□□□□ -1.78
SLC6A12P48065 RNU6-356P-201ENST00000384140 107 ntBASIC3.93□□□□□ -1.78
SLC6A12P48065 Y_RNA.578-201ENST00000390903 88 ntBASIC3.93□□□□□ -1.78
SLC6A12P48065 RNU11-4P-201ENST00000391149 133 ntBASIC3.93□□□□□ -1.78
SLC6A12P48065 DSTNP4-201ENST00000399472 474 ntBASIC3.93□□□□□ -1.78
SLC6A12P48065 AL136310.1-201ENST00000404926 654 ntBASIC3.93□□□□□ -1.78
SLC6A12P48065 PGAP1-203ENST00000409188 1246 ntTSL 2 BASIC3.93□□□□□ -1.78
SLC6A12P48065 RNA5SP239-201ENST00000410218 129 ntBASIC3.93□□□□□ -1.78
SLC6A12P48065 TPT1P2-201ENST00000413105 503 ntBASIC3.93□□□□□ -1.78
SLC6A12P48065 JKAMPP1-201ENST00000413804 919 ntBASIC3.93□□□□□ -1.78
SLC6A12P48065 AL356320.2-201ENST00000417263 507 ntBASIC3.93□□□□□ -1.78
SLC6A12P48065 AL121872.1-201ENST00000420327 281 ntTSL 5 BASIC3.93□□□□□ -1.78
SLC6A12P48065 FTH1P6-201ENST00000430768 320 ntBASIC3.93□□□□□ -1.78
SLC6A12P48065 AC084290.1-201ENST00000434995 374 ntBASIC3.93□□□□□ -1.78
SLC6A12P48065 AC078993.1-203ENST00000435789 1037 ntTSL 5 BASIC3.93□□□□□ -1.78
SLC6A12P48065 VN1R40P-201ENST00000455196 941 ntBASIC3.93□□□□□ -1.78
SLC6A12P48065 AL589765.1-201ENST00000457548 386 ntTSL 2 BASIC3.93□□□□□ -1.78
SLC6A12P48065 RPL38P1-201ENST00000460914 211 ntBASIC3.93□□□□□ -1.78
SLC6A12P48065 AC146507.1-201ENST00000468335 354 ntBASIC3.93□□□□□ -1.78
SLC6A12P48065 CCDC39-AS1-201ENST00000495357 283 ntTSL 3 BASIC3.93□□□□□ -1.78
SLC6A12P48065 AC139783.2-201ENST00000504847 1145 ntBASIC3.93□□□□□ -1.78
SLC6A12P48065 AC091860.1-201ENST00000505723 432 ntBASIC3.93□□□□□ -1.78
SLC6A12P48065 HNRNPKP5-201ENST00000515300 253 ntBASIC3.93□□□□□ -1.78
SLC6A12P48065 AC025524.2-207ENST00000520097 506 ntTSL 3 BASIC3.93□□□□□ -1.78
SLC6A12P48065 AC068992.1-201ENST00000521411 543 ntTSL 5 BASIC3.93□□□□□ -1.78
SLC6A12P48065 HMGB1P1-201ENST00000522557 636 ntBASIC3.93□□□□□ -1.78
SLC6A12P48065 AF233439.1-201ENST00000526235 401 ntTSL 3 BASIC3.93□□□□□ -1.78
SLC6A12P48065 AP001999.2-201ENST00000529417 389 ntTSL 3 BASIC3.93□□□□□ -1.78
SLC6A12P48065 DEFB130C-202ENST00000530001 230 ntBASIC3.93□□□□□ -1.78
SLC6A12P48065 AP003969.1-201ENST00000531846 400 ntTSL 2 BASIC3.93□□□□□ -1.78
SLC6A12P48065 AC140847.1-201ENST00000538025 534 ntTSL 4 BASIC3.93□□□□□ -1.78
SLC6A12P48065 AC020612.3-201ENST00000550644 570 ntTSL 2 BASIC3.93□□□□□ -1.78
SLC6A12P48065 LINC02386-202ENST00000551287 564 ntTSL 4 BASIC3.93□□□□□ -1.78
SLC6A12P48065 SRP54-AS1-203ENST00000556355 603 ntTSL 5 BASIC3.93□□□□□ -1.78
SLC6A12P48065 LINC02170-201ENST00000561519 555 ntTSL 4 BASIC3.93□□□□□ -1.78
SLC6A12P48065 MTCO1P40-201ENST00000574371 625 ntBASIC3.93□□□□□ -1.78
SLC6A12P48065 AC025627.2-201ENST00000576220 160 ntBASIC3.93□□□□□ -1.78
SLC6A12P48065 AC023575.1-201ENST00000580510 358 ntBASIC3.93□□□□□ -1.78
SLC6A12P48065 AP005901.2-201ENST00000581690 525 ntTSL 3 BASIC3.93□□□□□ -1.78
SLC6A12P48065 KPNA2P3-201ENST00000584190 848 ntBASIC3.93□□□□□ -1.78
Retrieved 100 of 98,524 protein–RNA pairs in 124 ms