Protein–RNA interactions for Protein: P31415

CASQ1, Calsequestrin-1, humanhuman

Predictions only

Length 396 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CASQ1P31415 RPS4XP14-201ENST00000493072 781 ntBASIC3.8□□□□□ -1.8
CASQ1P31415 PCNAP1-201ENST00000505363 709 ntBASIC3.8□□□□□ -1.8
CASQ1P31415 LINC02364-201ENST00000514802 687 ntTSL 2 BASIC3.8□□□□□ -1.8
CASQ1P31415 LINC02374-202ENST00000515222 578 ntTSL 4 BASIC3.8□□□□□ -1.8
CASQ1P31415 RNA5SP468-201ENST00000516782 93 ntBASIC3.8□□□□□ -1.8
CASQ1P31415 SNORD59.2-201ENST00000516873 68 ntBASIC3.8□□□□□ -1.8
CASQ1P31415 RNU6-711P-201ENST00000517255 106 ntBASIC3.8□□□□□ -1.8
CASQ1P31415 AP002993.1-201ENST00000538624 210 ntTSL 5 BASIC3.8□□□□□ -1.8
CASQ1P31415 AF123462.1-201ENST00000554307 446 ntTSL 3 BASIC3.8□□□□□ -1.8
CASQ1P31415 AL356022.1-202ENST00000555433 379 ntTSL 2 BASIC3.8□□□□□ -1.8
CASQ1P31415 AL160191.1-201ENST00000555480 566 ntTSL 4 BASIC3.8□□□□□ -1.8
CASQ1P31415 RLIMP1-201ENST00000339626 1680 ntBASIC3.8□□□□□ -1.8
CASQ1P31415 GPR18-203ENST00000397473 1660 ntAPPRIS P1 TSL 1 (best) BASIC3.8□□□□□ -1.8
CASQ1P31415 RNFT1-201ENST00000305783 2101 ntAPPRIS P1 TSL 1 (best) BASIC3.8□□□□□ -1.8
CASQ1P31415 FAM35A-201ENST00000298784 3402 ntAPPRIS P1 TSL 2 BASIC3.8□□□□□ -1.8
CASQ1P31415 AC007823.1-201ENST00000569932 1566 ntBASIC3.8□□□□□ -1.8
CASQ1P31415 FNDC3A-202ENST00000398316 5714 ntTSL 1 (best) BASIC3.79□□□□□ -1.8
CASQ1P31415 MUC15-201ENST00000281268 2968 ntTSL 5 BASIC3.79□□□□□ -1.8
CASQ1P31415 THEMIS-201ENST00000368248 3866 ntAPPRIS P3 TSL 1 (best) BASIC3.79□□□□□ -1.8
CASQ1P31415 PIGP-204ENST00000399102 688 ntAPPRIS P1 TSL 1 (best) BASIC3.79□□□□□ -1.8
CASQ1P31415 HSPE1P1-201ENST00000421494 318 ntBASIC3.79□□□□□ -1.8
CASQ1P31415 AL353705.1-201ENST00000433468 480 ntBASIC3.79□□□□□ -1.8
CASQ1P31415 ARHGEF7-AS1-201ENST00000435037 321 ntTSL 3 BASIC3.79□□□□□ -1.8
CASQ1P31415 LMO7DN-IT1-201ENST00000436872 321 ntTSL 3 BASIC3.79□□□□□ -1.8
CASQ1P31415 UBDP1-202ENST00000457888 382 ntBASIC3.79□□□□□ -1.8
CASQ1P31415 AC010618.1-201ENST00000469924 477 ntBASIC3.79□□□□□ -1.8
CASQ1P31415 DENND6A-AS1-201ENST00000470427 364 ntTSL 2 BASIC3.79□□□□□ -1.8
CASQ1P31415 AC074386.1-201ENST00000476560 767 ntBASIC3.79□□□□□ -1.8
CASQ1P31415 LINC01192-206ENST00000489012 818 ntTSL 5 BASIC3.79□□□□□ -1.8
CASQ1P31415 DWORF-201ENST00000489090 873 ntAPPRIS P1 TSL 1 (best) BASIC3.79□□□□□ -1.8
CASQ1P31415 AC004923.2-201ENST00000529649 369 ntBASIC3.79□□□□□ -1.8
CASQ1P31415 AC120057.2-201ENST00000571520 271 ntBASIC3.79□□□□□ -1.8
CASQ1P31415 MIR3138-201ENST00000585238 82 ntBASIC3.79□□□□□ -1.8
CASQ1P31415 AC105094.2-203ENST00000590357 555 ntTSL 4 BASIC3.79□□□□□ -1.8
CASQ1P31415 AC211433.2-201ENST00000608433 387 ntBASIC3.79□□□□□ -1.8
CASQ1P31415 AC110792.4-201ENST00000609843 298 ntBASIC3.79□□□□□ -1.8
CASQ1P31415 AL590240.3-201ENST00000621416 943 ntBASIC3.79□□□□□ -1.8
CASQ1P31415 WDR75-207ENST00000631047 270 ntTSL 5 BASIC3.79□□□□□ -1.8
CASQ1P31415 SLC25A46-208ENST00000513807 1546 ntTSL 2 BASIC3.79□□□□□ -1.8
CASQ1P31415 GPRC6A-201ENST00000310357 2860 ntAPPRIS P1 TSL 1 (best) BASIC3.79□□□□□ -1.8
CASQ1P31415 DMD-203ENST00000357033 13956 ntAPPRIS P3 TSL 1 (best) BASIC3.79□□□□□ -1.8
CASQ1P31415 SOCS4-201ENST00000339298 6667 ntAPPRIS P1 TSL 1 (best) BASIC3.78□□□□□ -1.8
CASQ1P31415 PTBP2-211ENST00000609116 12014 ntAPPRIS ALT1 TSL 1 (best) BASIC3.78□□□□□ -1.8
CASQ1P31415 RNA5SP383-201ENST00000362934 120 ntBASIC3.78□□□□□ -1.8
CASQ1P31415 CASKP1-201ENST00000412870 582 ntBASIC3.78□□□□□ -1.8
CASQ1P31415 AC093157.1-203ENST00000416329 713 ntTSL 5 BASIC3.78□□□□□ -1.8
CASQ1P31415 AL132796.1-201ENST00000421617 479 ntTSL 3 BASIC3.78□□□□□ -1.8
CASQ1P31415 RNF19BPX-201ENST00000426224 625 ntBASIC3.78□□□□□ -1.8
CASQ1P31415 LINC01317-202ENST00000442026 677 ntTSL 3 BASIC3.78□□□□□ -1.8
CASQ1P31415 LINC01645-201ENST00000451341 491 ntTSL 3 BASIC3.78□□□□□ -1.8
CASQ1P31415 RPL35AP28-201ENST00000459730 331 ntBASIC3.78□□□□□ -1.8
CASQ1P31415 RN7SL283P-201ENST00000489055 303 ntBASIC3.78□□□□□ -1.8
CASQ1P31415 KLHL6-AS1-201ENST00000491676 503 ntTSL 2 BASIC3.78□□□□□ -1.8
CASQ1P31415 AC093663.1-201ENST00000497190 394 ntBASIC3.78□□□□□ -1.8
CASQ1P31415 AC103952.1-201ENST00000521872 590 ntTSL 3 BASIC3.78□□□□□ -1.8
CASQ1P31415 AC104027.1-201ENST00000521887 300 ntBASIC3.78□□□□□ -1.8
CASQ1P31415 AC022367.1-202ENST00000535066 537 ntTSL 3 BASIC3.78□□□□□ -1.8
CASQ1P31415 AC084819.1-201ENST00000537293 424 ntTSL 1 (best) BASIC3.78□□□□□ -1.8
CASQ1P31415 AC019209.2-201ENST00000545704 373 ntTSL 3 BASIC3.78□□□□□ -1.8
CASQ1P31415 AL162311.1-201ENST00000553046 601 ntTSL 3 BASIC3.78□□□□□ -1.8
CASQ1P31415 MIR6719-201ENST00000622428 87 ntBASIC3.78□□□□□ -1.8
CASQ1P31415 MIR6500-201ENST00000622700 86 ntBASIC3.78□□□□□ -1.8
CASQ1P31415 MME-216ENST00000615825 5523 ntAPPRIS P1 TSL 1 (best) BASIC3.78□□□□□ -1.8
CASQ1P31415 CD86-203ENST00000393627 1405 ntAPPRIS ALT2 TSL 1 (best) BASIC3.78□□□□□ -1.8
CASQ1P31415 LIG4-205ENST00000614526 3884 ntTSL 2 BASIC3.77□□□□□ -1.81
CASQ1P31415 MBNL3-204ENST00000370853 2661 ntAPPRIS P4 TSL 1 (best) BASIC3.77□□□□□ -1.81
CASQ1P31415 CLEC4A-201ENST00000229332 1281 ntAPPRIS P1 TSL 1 (best) BASIC3.77□□□□□ -1.81
CASQ1P31415 BX248415.1-201ENST00000367421 1043 ntAPPRIS P1 TSL 1 (best) BASIC3.77□□□□□ -1.81
CASQ1P31415 DFNB59-201ENST00000375129 1202 ntAPPRIS P1 TSL 1 (best) BASIC3.77□□□□□ -1.81
CASQ1P31415 SNORA3.3-201ENST00000408712 125 ntBASIC3.77□□□□□ -1.81
CASQ1P31415 IQCA1-AS1-201ENST00000413353 489 ntTSL 3 BASIC3.77□□□□□ -1.81
CASQ1P31415 AC109780.2-201ENST00000413467 845 ntBASIC3.77□□□□□ -1.81
CASQ1P31415 SDCBPP3-201ENST00000419629 891 ntBASIC3.77□□□□□ -1.81
CASQ1P31415 AC006455.6-201ENST00000426192 893 ntBASIC3.77□□□□□ -1.81
CASQ1P31415 RPL23AP82-202ENST00000427528 469 ntBASIC3.77□□□□□ -1.81
CASQ1P31415 AL035407.2-201ENST00000454090 378 ntBASIC3.77□□□□□ -1.81
CASQ1P31415 NDUFA12P1-201ENST00000455914 406 ntBASIC3.77□□□□□ -1.81
CASQ1P31415 NFU1-207ENST00000462320 558 ntTSL 4 BASIC3.77□□□□□ -1.81
CASQ1P31415 CENPBD1P1-201ENST00000464061 469 ntBASIC3.77□□□□□ -1.81
CASQ1P31415 SETP14-201ENST00000497538 873 ntBASIC3.77□□□□□ -1.81
CASQ1P31415 AC034223.2-201ENST00000511840 425 ntTSL 3 BASIC3.77□□□□□ -1.81
CASQ1P31415 SCARNA14-201ENST00000516903 136 ntBASIC3.77□□□□□ -1.81
CASQ1P31415 RAD21-203ENST00000517749 1003 ntTSL 1 (best) BASIC3.77□□□□□ -1.81
CASQ1P31415 AC083923.2-202ENST00000517773 498 ntTSL 3 BASIC3.77□□□□□ -1.81
CASQ1P31415 AC107934.2-201ENST00000518653 310 ntBASIC3.77□□□□□ -1.81
CASQ1P31415 PCAT1-201ENST00000519319 734 ntTSL 2 BASIC3.77□□□□□ -1.81
CASQ1P31415 AC068880.2-201ENST00000521016 362 ntTSL 5 BASIC3.77□□□□□ -1.81
CASQ1P31415 NR1H4-204ENST00000546380 565 ntTSL 3 BASIC3.77□□□□□ -1.81
CASQ1P31415 AL158801.3-201ENST00000555514 363 ntTSL 3 BASIC3.77□□□□□ -1.81
CASQ1P31415 AC011444.3-201ENST00000588342 325 ntTSL 3 BASIC3.77□□□□□ -1.81
CASQ1P31415 AC097467.3-204ENST00000595229 827 ntTSL 5 BASIC3.77□□□□□ -1.81
CASQ1P31415 AL008729.1-201ENST00000606627 553 ntTSL 4 BASIC3.77□□□□□ -1.81
CASQ1P31415 LINC00310-205ENST00000609062 863 ntTSL 5 BASIC3.77□□□□□ -1.81
CASQ1P31415 AC019176.2-201ENST00000611579 315 ntBASIC3.77□□□□□ -1.81
CASQ1P31415 AL445567.2-201ENST00000618935 498 ntBASIC3.77□□□□□ -1.81
CASQ1P31415 ASAH1-263ENST00000637872 886 ntTSL 5 BASIC3.77□□□□□ -1.81
CASQ1P31415 KNL1-202ENST00000399668 7607 ntAPPRIS ALT2 TSL 1 (best) BASIC3.77□□□□□ -1.81
CASQ1P31415 DOPEY1-203ENST00000369739 7743 ntAPPRIS ALT1 TSL 1 (best) BASIC3.77□□□□□ -1.81
CASQ1P31415 SAGE4P-201ENST00000442271 3381 ntBASIC3.77□□□□□ -1.81
CASQ1P31415 PPHLN1-208ENST00000449194 1583 ntAPPRIS ALT1 TSL 1 (best) BASIC3.76□□□□□ -1.81
Retrieved 100 of 98,524 protein–RNA pairs in 93.5 ms