Protein–RNA interactions for Protein: P29353

SHC1, SHC-transforming protein 1, humanhuman

Predictions only

Length 583 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHC1P29353 TLR8-202ENST00000311912 3367 ntAPPRIS P4 TSL 1 (best) BASIC3.67□□□□□ -1.82
SHC1P29353 OR4S2-202ENST00000641692 2211 ntAPPRIS P1 BASIC3.67□□□□□ -1.82
SHC1P29353 ATP13A3-203ENST00000439040 7720 ntAPPRIS P1 TSL 5 BASIC3.67□□□□□ -1.82
SHC1P29353 AC074029.4-201ENST00000624796 1859 ntBASIC3.67□□□□□ -1.82
SHC1P29353 AC046195.1-201ENST00000518973 4171 ntTSL 2 BASIC3.66□□□□□ -1.82
SHC1P29353 DNAH8-202ENST00000359357 13864 ntAPPRIS ALT2 TSL 2 BASIC3.66□□□□□ -1.82
SHC1P29353 MUC7-201ENST00000304887 2443 ntAPPRIS P2 TSL 1 (best) BASIC3.66□□□□□ -1.82
SHC1P29353 CFHR3-201ENST00000367425 1645 ntAPPRIS P1 TSL 1 (best) BASIC3.66□□□□□ -1.82
SHC1P29353 LINC02471-203ENST00000641941 4752 ntBASIC3.66□□□□□ -1.82
SHC1P29353 ZNF705E-201ENST00000525199 3442 ntAPPRIS P1 TSL 2 BASIC3.66□□□□□ -1.82
SHC1P29353 SAMSN1-202ENST00000400564 1382 ntTSL 1 (best) BASIC3.66□□□□□ -1.82
SHC1P29353 LINC00690-201ENST00000429949 1365 ntTSL 1 (best) BASIC3.66□□□□□ -1.82
SHC1P29353 LINC00283-201ENST00000430111 1947 ntTSL 5 BASIC3.66□□□□□ -1.82
SHC1P29353 MLF1-208ENST00000478894 1372 ntTSL 2 BASIC3.66□□□□□ -1.82
SHC1P29353 AL049555.1-201ENST00000562834 1933 ntBASIC3.66□□□□□ -1.82
SHC1P29353 SLCO1B1-201ENST00000256958 2229 ntAPPRIS P1 TSL 1 (best) BASIC3.66□□□□□ -1.82
SHC1P29353 SLITRK5-201ENST00000325089 21103 ntAPPRIS P1 TSL 1 (best) BASIC3.66□□□□□ -1.82
SHC1P29353 PANK1-202ENST00000322191 2513 ntTSL 1 (best) BASIC3.66□□□□□ -1.82
SHC1P29353 BDP1P-201ENST00000582658 1990 ntBASIC3.66□□□□□ -1.82
SHC1P29353 SPRR2C-201ENST00000290702 219 ntBASIC3.66□□□□□ -1.82
SHC1P29353 ANKRD36P1-201ENST00000344424 659 ntBASIC3.66□□□□□ -1.82
SHC1P29353 RNU4-92P-201ENST00000363783 136 ntBASIC3.66□□□□□ -1.82
SHC1P29353 SNRPE-201ENST00000367208 355 ntTSL 2 BASIC3.66□□□□□ -1.82
SHC1P29353 ENSAP1-201ENST00000392855 326 ntBASIC3.66□□□□□ -1.82
SHC1P29353 FBXO11-203ENST00000405808 299 ntTSL 5 BASIC3.66□□□□□ -1.82
SHC1P29353 HMGB3P18-201ENST00000406327 590 ntBASIC3.66□□□□□ -1.82
SHC1P29353 RN7SKP56-201ENST00000410513 331 ntBASIC3.66□□□□□ -1.82
SHC1P29353 AC108032.1-201ENST00000416706 207 ntBASIC3.66□□□□□ -1.82
SHC1P29353 HMGB1P49-201ENST00000418882 569 ntBASIC3.66□□□□□ -1.82
SHC1P29353 LINC00400-201ENST00000425609 547 ntTSL 3 BASIC3.66□□□□□ -1.82
SHC1P29353 OR5BE1P-201ENST00000425977 939 ntBASIC3.66□□□□□ -1.82
SHC1P29353 AL122010.1-201ENST00000429293 720 ntTSL 2 BASIC3.66□□□□□ -1.82
SHC1P29353 RPL7P4-203ENST00000430239 730 ntBASIC3.66□□□□□ -1.82
SHC1P29353 AC087650.1-201ENST00000431445 468 ntBASIC3.66□□□□□ -1.82
SHC1P29353 VN1R108P-201ENST00000431580 830 ntBASIC3.66□□□□□ -1.82
SHC1P29353 AL589935.1-218ENST00000434683 529 ntTSL 3 BASIC3.66□□□□□ -1.82
SHC1P29353 RPL7P28-201ENST00000437739 740 ntBASIC3.66□□□□□ -1.82
SHC1P29353 AC136489.1-201ENST00000438181 717 ntTSL 3 BASIC3.66□□□□□ -1.82
SHC1P29353 EEF1A1P39-201ENST00000440791 250 ntBASIC3.66□□□□□ -1.82
SHC1P29353 HMGB3P6-201ENST00000444896 598 ntBASIC3.66□□□□□ -1.82
SHC1P29353 YWHAQP9-201ENST00000445891 512 ntBASIC3.66□□□□□ -1.82
SHC1P29353 RNF148-202ENST00000447240 839 ntTSL 2 BASIC3.66□□□□□ -1.82
SHC1P29353 AC114755.5-201ENST00000447760 831 ntBASIC3.66□□□□□ -1.82
SHC1P29353 SNAP25-AS1-205ENST00000453544 368 ntTSL 5 BASIC3.66□□□□□ -1.82
SHC1P29353 RPL38P1-201ENST00000460914 211 ntBASIC3.66□□□□□ -1.82
SHC1P29353 DENND6A-AS1-201ENST00000470427 364 ntTSL 2 BASIC3.66□□□□□ -1.82
SHC1P29353 AC083800.1-201ENST00000490594 246 ntAPPRIS P1 TSL 3 BASIC3.66□□□□□ -1.82
SHC1P29353 RPL29P14-201ENST00000495837 428 ntBASIC3.66□□□□□ -1.82
SHC1P29353 AC069360.1-201ENST00000503469 431 ntTSL 2 BASIC3.66□□□□□ -1.82
SHC1P29353 LINC02198-201ENST00000504280 810 ntTSL 3 BASIC3.66□□□□□ -1.82
SHC1P29353 AC010486.3-201ENST00000511602 785 ntBASIC3.66□□□□□ -1.82
SHC1P29353 AC104619.2-201ENST00000514293 646 ntTSL 3 BASIC3.66□□□□□ -1.82
SHC1P29353 AC107882.1-201ENST00000530837 477 ntTSL 3 BASIC3.66□□□□□ -1.82
SHC1P29353 AC023796.1-201ENST00000536131 670 ntTSL 3 BASIC3.66□□□□□ -1.82
SHC1P29353 AC140847.1-201ENST00000538025 534 ntTSL 4 BASIC3.66□□□□□ -1.82
SHC1P29353 AC023050.2-201ENST00000544968 387 ntBASIC3.66□□□□□ -1.82
SHC1P29353 AC013417.1-201ENST00000549896 271 ntTSL 5 BASIC3.66□□□□□ -1.82
SHC1P29353 LINC02416-201ENST00000550019 540 ntTSL 4 BASIC3.66□□□□□ -1.82
SHC1P29353 AL445363.1-202ENST00000553697 545 ntTSL 3 BASIC3.66□□□□□ -1.82
SHC1P29353 LINC02303-202ENST00000554711 531 ntTSL 3 BASIC3.66□□□□□ -1.82
SHC1P29353 HNRNPCP4-201ENST00000571636 900 ntBASIC3.66□□□□□ -1.82
SHC1P29353 AC133065.1-201ENST00000572017 575 ntTSL 3 BASIC3.66□□□□□ -1.82
SHC1P29353 AC012417.1-201ENST00000582307 1039 ntBASIC3.66□□□□□ -1.82
SHC1P29353 LINC00907-208ENST00000593051 1092 ntTSL 1 (best) BASIC3.66□□□□□ -1.82
SHC1P29353 AL358072.1-201ENST00000604156 575 ntBASIC3.66□□□□□ -1.82
SHC1P29353 AP003392.5-201ENST00000607857 415 ntBASIC3.66□□□□□ -1.82
SHC1P29353 AC007349.4-201ENST00000608114 532 ntBASIC3.66□□□□□ -1.82
SHC1P29353 MIR6868-201ENST00000611215 58 ntBASIC3.66□□□□□ -1.82
SHC1P29353 AC068831.8-201ENST00000620171 435 ntBASIC3.66□□□□□ -1.82
SHC1P29353 AL512506.2-201ENST00000624472 458 ntBASIC3.66□□□□□ -1.82
SHC1P29353 RNA5SP196-201ENST00000625967 102 ntBASIC3.66□□□□□ -1.82
SHC1P29353 OR5BE1P-202ENST00000641168 1176 ntBASIC3.66□□□□□ -1.82
SHC1P29353 AC020571.1-202ENST00000433933 1413 ntTSL 1 (best) BASIC3.66□□□□□ -1.82
SHC1P29353 UGT8-202ENST00000394511 2448 ntAPPRIS P1 TSL 1 (best) BASIC3.66□□□□□ -1.82
SHC1P29353 RGPD1-202ENST00000409776 6692 ntAPPRIS ALT2 TSL 1 (best) BASIC3.66□□□□□ -1.82
SHC1P29353 LIG4-201ENST00000356922 4096 ntAPPRIS P1 TSL 1 (best) BASIC3.66□□□□□ -1.82
SHC1P29353 CNGA1-201ENST00000358519 2627 ntAPPRIS P3 TSL 1 (best) BASIC3.66□□□□□ -1.82
SHC1P29353 RFX7-201ENST00000559447 10426 ntAPPRIS P5 TSL 5 BASIC3.66□□□□□ -1.82
SHC1P29353 CPXCR1-203ENST00000614120 1485 ntAPPRIS P1 TSL 3 BASIC3.66□□□□□ -1.82
SHC1P29353 OXR1-201ENST00000297447 1944 ntTSL 1 (best) BASIC3.66□□□□□ -1.82
SHC1P29353 PPP1R9A-208ENST00000456331 10090 ntTSL 1 (best) BASIC3.66□□□□□ -1.82
SHC1P29353 AC004852.2-204ENST00000614137 1370 ntTSL 1 (best) BASIC3.65□□□□□ -1.82
SHC1P29353 AC084357.3-201ENST00000541353 2751 ntTSL 5 BASIC3.65□□□□□ -1.82
SHC1P29353 ZCCHC7-202ENST00000336755 2619 ntAPPRIS P1 TSL 2 BASIC3.65□□□□□ -1.82
SHC1P29353 AC026951.1-201ENST00000559530 2459 ntBASIC3.65□□□□□ -1.82
SHC1P29353 CCNH-206ENST00000508855 2391 ntTSL 1 (best) BASIC3.65□□□□□ -1.83
SHC1P29353 SCN3A-201ENST00000283254 9091 ntAPPRIS P3 TSL 1 (best) BASIC3.65□□□□□ -1.83
SHC1P29353 Y_RNA.169-201ENST00000363745 96 ntBASIC3.65□□□□□ -1.83
SHC1P29353 RNU6-353P-201ENST00000364266 108 ntBASIC3.65□□□□□ -1.83
SHC1P29353 AL138749.1-201ENST00000397864 791 ntTSL 5 BASIC3.65□□□□□ -1.83
SHC1P29353 RPL31P52-201ENST00000407532 367 ntBASIC3.65□□□□□ -1.83
SHC1P29353 RNU4-6P-201ENST00000410804 122 ntBASIC3.65□□□□□ -1.83
SHC1P29353 ZRANB2-AS2-201ENST00000411721 518 ntTSL 3 BASIC3.65□□□□□ -1.83
SHC1P29353 CYP4F29P-201ENST00000420685 446 ntBASIC3.65□□□□□ -1.83
SHC1P29353 DYDC1-203ENST00000421924 708 ntAPPRIS P1 TSL 1 (best) BASIC3.65□□□□□ -1.83
SHC1P29353 AL929288.1-201ENST00000426262 746 ntTSL 3 BASIC3.65□□□□□ -1.83
SHC1P29353 HIGD1AP12-201ENST00000427832 281 ntBASIC3.65□□□□□ -1.83
SHC1P29353 AC064871.1-201ENST00000444562 427 ntTSL 3 BASIC3.65□□□□□ -1.83
SHC1P29353 MTCYBP42-201ENST00000444653 1130 ntBASIC3.65□□□□□ -1.83
SHC1P29353 AC068135.1-201ENST00000446164 246 ntBASIC3.65□□□□□ -1.83
Retrieved 100 of 98,524 protein–RNA pairs in 88.5 ms