Protein–RNA interactions for Protein: Q9Y2Q9

MRPS28, 28S ribosomal protein S28, mitochondrial, humanhuman

Known RBP Predictions only

Length 187 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MRPS28Q9Y2Q9 LINC01423-201ENST00000414189 608 ntTSL 3 BASIC3.72□□□□□ -1.81
MRPS28Q9Y2Q9 LUZP4P1-201ENST00000415420 344 ntBASIC3.72□□□□□ -1.81
MRPS28Q9Y2Q9 AC004552.1-201ENST00000419089 348 ntBASIC3.72□□□□□ -1.81
MRPS28Q9Y2Q9 AC006960.1-201ENST00000419980 153 ntBASIC3.72□□□□□ -1.81
MRPS28Q9Y2Q9 SLC16A12-AS1-201ENST00000423474 405 ntTSL 3 BASIC3.72□□□□□ -1.81
MRPS28Q9Y2Q9 BX119904.4-201ENST00000424402 301 ntBASIC3.72□□□□□ -1.81
MRPS28Q9Y2Q9 USP9YP31-201ENST00000431405 881 ntBASIC3.72□□□□□ -1.81
MRPS28Q9Y2Q9 UBE2Q2P4Y-201ENST00000433767 207 ntBASIC3.72□□□□□ -1.81
MRPS28Q9Y2Q9 ATP5F1P1-201ENST00000433775 569 ntBASIC3.72□□□□□ -1.81
MRPS28Q9Y2Q9 AC004837.2-201ENST00000435766 731 ntTSL 3 BASIC3.72□□□□□ -1.81
MRPS28Q9Y2Q9 OR5H14-201ENST00000437310 1080 ntAPPRIS P1 BASIC3.72□□□□□ -1.81
MRPS28Q9Y2Q9 ISCA1P2-201ENST00000438679 421 ntBASIC3.72□□□□□ -1.81
MRPS28Q9Y2Q9 USP9YP22-201ENST00000438971 294 ntBASIC3.72□□□□□ -1.81
MRPS28Q9Y2Q9 AC093155.1-201ENST00000440164 826 ntBASIC3.72□□□□□ -1.81
MRPS28Q9Y2Q9 AL353748.1-201ENST00000440753 474 ntBASIC3.72□□□□□ -1.81
MRPS28Q9Y2Q9 TPTE2P6-202ENST00000445572 1007 ntBASIC3.72□□□□□ -1.81
MRPS28Q9Y2Q9 AL365271.1-201ENST00000448909 603 ntTSL 3 BASIC3.72□□□□□ -1.81
MRPS28Q9Y2Q9 RNU7-125P-201ENST00000458760 62 ntBASIC3.72□□□□□ -1.81
MRPS28Q9Y2Q9 RPS26P3-201ENST00000470205 348 ntBASIC3.72□□□□□ -1.81
MRPS28Q9Y2Q9 RPL23AP71-201ENST00000470966 469 ntBASIC3.72□□□□□ -1.81
MRPS28Q9Y2Q9 MTND3P7-201ENST00000474435 343 ntBASIC3.72□□□□□ -1.81
MRPS28Q9Y2Q9 RPS3AP43-201ENST00000479743 781 ntBASIC3.72□□□□□ -1.81
MRPS28Q9Y2Q9 FSBP-201ENST00000481490 1158 ntTSL 1 (best) BASIC3.72□□□□□ -1.81
MRPS28Q9Y2Q9 AC090543.2-201ENST00000483963 348 ntBASIC3.72□□□□□ -1.81
MRPS28Q9Y2Q9 VPS13A-211ENST00000484581 1155 ntTSL 2 BASIC3.72□□□□□ -1.81
MRPS28Q9Y2Q9 AC004057.1-201ENST00000485827 348 ntBASIC3.72□□□□□ -1.81
MRPS28Q9Y2Q9 ACTG1P13-201ENST00000486987 1043 ntBASIC3.72□□□□□ -1.81
MRPS28Q9Y2Q9 RHOBTB3-204ENST00000504179 883 ntTSL 5 BASIC3.72□□□□□ -1.81
MRPS28Q9Y2Q9 AC108935.1-201ENST00000504874 518 ntTSL 2 BASIC3.72□□□□□ -1.81
MRPS28Q9Y2Q9 AC112198.1-201ENST00000505369 1220 ntBASIC3.72□□□□□ -1.81
MRPS28Q9Y2Q9 AC079921.1-201ENST00000509449 946 ntTSL 3 BASIC3.72□□□□□ -1.81
MRPS28Q9Y2Q9 ERAP2-205ENST00000510309 1275 ntTSL 1 (best) BASIC3.72□□□□□ -1.81
MRPS28Q9Y2Q9 MTND1P22-201ENST00000510572 951 ntBASIC3.72□□□□□ -1.81
MRPS28Q9Y2Q9 AC108515.1-201ENST00000517407 525 ntTSL 3 BASIC3.72□□□□□ -1.81
MRPS28Q9Y2Q9 CDH12P4-201ENST00000517835 295 ntBASIC3.72□□□□□ -1.81
MRPS28Q9Y2Q9 CDH12P3-201ENST00000517935 295 ntBASIC3.72□□□□□ -1.81
MRPS28Q9Y2Q9 CDH12P1-201ENST00000518435 295 ntBASIC3.72□□□□□ -1.81
MRPS28Q9Y2Q9 AC105185.1-201ENST00000518705 535 ntBASIC3.72□□□□□ -1.81
MRPS28Q9Y2Q9 LY96-202ENST00000518893 430 ntTSL 3 BASIC3.72□□□□□ -1.81
MRPS28Q9Y2Q9 IGKV2-36-201ENST00000519999 223 ntBASIC3.72□□□□□ -1.81
MRPS28Q9Y2Q9 PTK2-220ENST00000520151 573 ntTSL 4 BASIC3.72□□□□□ -1.81
MRPS28Q9Y2Q9 AC087808.1-201ENST00000520501 361 ntBASIC3.72□□□□□ -1.81
MRPS28Q9Y2Q9 AC011008.1-201ENST00000522026 439 ntTSL 3 BASIC3.72□□□□□ -1.81
MRPS28Q9Y2Q9 AP002340.1-201ENST00000529298 285 ntTSL 3 BASIC3.72□□□□□ -1.81
MRPS28Q9Y2Q9 AC005832.3-201ENST00000537929 631 ntBASIC3.72□□□□□ -1.81
MRPS28Q9Y2Q9 LINC02384-206ENST00000541707 904 ntTSL 3 BASIC3.72□□□□□ -1.81
MRPS28Q9Y2Q9 LYZ-203ENST00000549690 669 ntTSL 2 BASIC3.72□□□□□ -1.81
MRPS28Q9Y2Q9 SRP54-AS1-203ENST00000556355 603 ntTSL 5 BASIC3.72□□□□□ -1.81
MRPS28Q9Y2Q9 AL356022.1-201ENST00000557465 483 ntTSL 5 BASIC3.72□□□□□ -1.81
MRPS28Q9Y2Q9 AC091117.2-201ENST00000560324 542 ntTSL 4 BASIC3.72□□□□□ -1.81
MRPS28Q9Y2Q9 AC090751.1-201ENST00000566966 267 ntBASIC3.72□□□□□ -1.81
MRPS28Q9Y2Q9 AC104785.1-201ENST00000603220 588 ntBASIC3.72□□□□□ -1.81
MRPS28Q9Y2Q9 AC093765.1-201ENST00000603758 881 ntBASIC3.72□□□□□ -1.81
MRPS28Q9Y2Q9 AC124312.4-201ENST00000605533 310 ntBASIC3.72□□□□□ -1.81
MRPS28Q9Y2Q9 VIS1.1-201ENST00000610517 203 ntBASIC3.72□□□□□ -1.81
MRPS28Q9Y2Q9 C2orf91-203ENST00000615044 393 ntAPPRIS ALT2 TSL 5 BASIC3.72□□□□□ -1.81
MRPS28Q9Y2Q9 AC073348.1-201ENST00000623002 331 ntBASIC3.72□□□□□ -1.81
MRPS28Q9Y2Q9 AC091965.5-201ENST00000624785 342 ntBASIC3.72□□□□□ -1.81
MRPS28Q9Y2Q9 AC244517.7-201ENST00000625144 398 ntTSL 3 BASIC3.72□□□□□ -1.81
MRPS28Q9Y2Q9 AC134980.1-211ENST00000638243 1094 ntTSL 2 BASIC3.72□□□□□ -1.81
MRPS28Q9Y2Q9 ADAM29-201ENST00000359240 3325 ntAPPRIS P1 TSL 2 BASIC3.72□□□□□ -1.81
MRPS28Q9Y2Q9 FAM111B-202ENST00000411426 3344 ntTSL 4 BASIC3.72□□□□□ -1.81
MRPS28Q9Y2Q9 LINC01733-201ENST00000449316 4604 ntTSL 1 (best) BASIC3.72□□□□□ -1.81
MRPS28Q9Y2Q9 PPP1R9A-208ENST00000456331 10090 ntTSL 1 (best) BASIC3.72□□□□□ -1.81
MRPS28Q9Y2Q9 CENPI-202ENST00000372927 3262 ntAPPRIS P3 TSL 5 BASIC3.72□□□□□ -1.81
MRPS28Q9Y2Q9 C2orf16-202ENST00000447166 16401 ntAPPRIS ALT2 TSL 3 BASIC3.72□□□□□ -1.81
MRPS28Q9Y2Q9 SYNE2-204ENST00000358025 21842 ntAPPRIS P3 TSL 5 BASIC3.72□□□□□ -1.81
MRPS28Q9Y2Q9 CNBD1-202ENST00000518476 1594 ntAPPRIS P2 TSL 1 (best) BASIC3.72□□□□□ -1.81
MRPS28Q9Y2Q9 RGS21-201ENST00000417209 1794 ntAPPRIS P1 TSL 1 (best) BASIC3.71□□□□□ -1.81
MRPS28Q9Y2Q9 CDKL3-209ENST00000523054 1775 ntTSL 2 BASIC3.71□□□□□ -1.81
MRPS28Q9Y2Q9 SPATA31D2P-201ENST00000429999 4388 ntBASIC3.71□□□□□ -1.82
MRPS28Q9Y2Q9 RNF38-201ENST00000259605 5012 ntTSL 1 (best) BASIC3.71□□□□□ -1.82
MRPS28Q9Y2Q9 AC097504.1-201ENST00000515103 2415 ntBASIC3.71□□□□□ -1.82
MRPS28Q9Y2Q9 UBE4A-201ENST00000252108 6103 ntAPPRIS ALT1 TSL 1 (best) BASIC3.71□□□□□ -1.82
MRPS28Q9Y2Q9 KCNJ13-201ENST00000233826 2950 ntAPPRIS P1 TSL 1 (best) BASIC3.71□□□□□ -1.82
MRPS28Q9Y2Q9 ADAMTS9-AS1-203ENST00000471990 1606 ntTSL 2 BASIC3.71□□□□□ -1.82
MRPS28Q9Y2Q9 COPG2-201ENST00000330992 3073 ntTSL 1 (best) BASIC3.71□□□□□ -1.82
MRPS28Q9Y2Q9 RAD51AP1-201ENST00000228843 2163 ntAPPRIS ALT2 TSL 1 (best) BASIC3.71□□□□□ -1.82
MRPS28Q9Y2Q9 AC007529.1-201ENST00000418574 2178 ntBASIC3.71□□□□□ -1.82
MRPS28Q9Y2Q9 AC119744.1-201ENST00000454746 1715 ntBASIC3.71□□□□□ -1.82
MRPS28Q9Y2Q9 CD80-201ENST00000264246 2725 ntAPPRIS P1 TSL 1 (best) BASIC3.71□□□□□ -1.82
MRPS28Q9Y2Q9 ZNF415-201ENST00000243643 2270 ntAPPRIS P3 TSL 1 (best) BASIC3.71□□□□□ -1.82
MRPS28Q9Y2Q9 DFNB59-201ENST00000375129 1202 ntAPPRIS P1 TSL 1 (best) BASIC3.71□□□□□ -1.82
MRPS28Q9Y2Q9 TUBD1-204ENST00000376094 1154 ntTSL 1 (best) BASIC3.71□□□□□ -1.82
MRPS28Q9Y2Q9 TRGV8-201ENST00000390343 468 ntAPPRIS P1 BASIC3.71□□□□□ -1.82
MRPS28Q9Y2Q9 SNORA11B-201ENST00000408175 129 ntBASIC3.71□□□□□ -1.82
MRPS28Q9Y2Q9 SF3B1-202ENST00000409915 600 ntTSL 2 BASIC3.71□□□□□ -1.82
MRPS28Q9Y2Q9 AL589642.2-201ENST00000413291 839 ntTSL 3 BASIC3.71□□□□□ -1.82
MRPS28Q9Y2Q9 AL161449.1-201ENST00000414531 1199 ntBASIC3.71□□□□□ -1.82
MRPS28Q9Y2Q9 AC093157.1-203ENST00000416329 713 ntTSL 5 BASIC3.71□□□□□ -1.82
MRPS28Q9Y2Q9 GTF2IP23-201ENST00000423746 351 ntBASIC3.71□□□□□ -1.82
MRPS28Q9Y2Q9 EIF1P3-201ENST00000423841 334 ntBASIC3.71□□□□□ -1.82
MRPS28Q9Y2Q9 AC009313.1-201ENST00000425470 503 ntTSL 3 BASIC3.71□□□□□ -1.82
MRPS28Q9Y2Q9 AL132765.1-201ENST00000434165 553 ntBASIC3.71□□□□□ -1.82
MRPS28Q9Y2Q9 AC068533.3-201ENST00000435524 404 ntTSL 5 BASIC3.71□□□□□ -1.82
MRPS28Q9Y2Q9 MTND3P1-201ENST00000441336 220 ntBASIC3.71□□□□□ -1.82
MRPS28Q9Y2Q9 AC118469.1-201ENST00000442943 488 ntBASIC3.71□□□□□ -1.82
MRPS28Q9Y2Q9 AC009987.1-201ENST00000446888 806 ntTSL 5 BASIC3.71□□□□□ -1.82
MRPS28Q9Y2Q9 AL162591.2-201ENST00000449634 317 ntBASIC3.71□□□□□ -1.82
MRPS28Q9Y2Q9 AC097262.1-201ENST00000452559 548 ntBASIC3.71□□□□□ -1.82
Retrieved 100 of 98,524 protein–RNA pairs in 94.6 ms