Protein–RNA interactions for Protein: Q8WW32

HMGB4, High mobility group protein B4, humanhuman

Predictions only

Length 186 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB4Q8WW32 OR8K3-202ENST00000623845 939 ntAPPRIS P1 BASIC4.58□□□□□ -1.68
HMGB4Q8WW32 AP003399.1-201ENST00000637534 361 ntBASIC4.58□□□□□ -1.68
HMGB4Q8WW32 SCN1A-202ENST00000375405 8097 ntAPPRIS P3 TSL 5 BASIC4.58□□□□□ -1.68
HMGB4Q8WW32 FBXL13-207ENST00000455112 2274 ntTSL 1 (best) BASIC4.58□□□□□ -1.68
HMGB4Q8WW32 UBA6-AS1-203ENST00000500538 3352 ntTSL 1 (best) BASIC4.58□□□□□ -1.68
HMGB4Q8WW32 GRIK2-201ENST00000318991 4317 ntTSL 5 BASIC4.58□□□□□ -1.68
HMGB4Q8WW32 AL672167.1-205ENST00000641112 3080 ntBASIC4.58□□□□□ -1.68
HMGB4Q8WW32 AC126323.6-202ENST00000568092 3511 ntBASIC4.58□□□□□ -1.68
HMGB4Q8WW32 SAGE4P-201ENST00000442271 3381 ntBASIC4.57□□□□□ -1.68
HMGB4Q8WW32 ZFPM2-203ENST00000517361 3300 ntTSL 2 BASIC4.57□□□□□ -1.68
HMGB4Q8WW32 UGT8-202ENST00000394511 2448 ntAPPRIS P1 TSL 1 (best) BASIC4.57□□□□□ -1.68
HMGB4Q8WW32 GABRG2-224ENST00000640574 3150 ntTSL 5 BASIC4.57□□□□□ -1.68
HMGB4Q8WW32 AL445487.1-201ENST00000415694 1580 ntBASIC4.57□□□□□ -1.68
HMGB4Q8WW32 SALL4P2-201ENST00000423288 2910 ntBASIC4.57□□□□□ -1.68
HMGB4Q8WW32 AC135352.1-201ENST00000506173 1418 ntBASIC4.57□□□□□ -1.68
HMGB4Q8WW32 TLR6-205ENST00000610323 1443 ntTSL 5 BASIC4.57□□□□□ -1.68
HMGB4Q8WW32 AC011978.2-201ENST00000569835 2054 ntBASIC4.57□□□□□ -1.68
HMGB4Q8WW32 FLJ46284-201ENST00000504861 3421 ntTSL 2 BASIC4.57□□□□□ -1.68
HMGB4Q8WW32 LINC01355-201ENST00000566551 5444 ntBASIC4.57□□□□□ -1.68
HMGB4Q8WW32 CROT-204ENST00000442291 1993 ntTSL 5 BASIC4.57□□□□□ -1.68
HMGB4Q8WW32 ZNF562-201ENST00000293648 12380 ntTSL 2 BASIC4.57□□□□□ -1.68
HMGB4Q8WW32 MUCL1-201ENST00000308796 470 ntAPPRIS P2 TSL 1 (best) BASIC4.57□□□□□ -1.68
HMGB4Q8WW32 RNA5SP388-201ENST00000362584 119 ntBASIC4.57□□□□□ -1.68
HMGB4Q8WW32 RNU6-553P-201ENST00000364047 96 ntBASIC4.57□□□□□ -1.68
HMGB4Q8WW32 BMS1P3-201ENST00000372011 932 ntBASIC4.57□□□□□ -1.68
HMGB4Q8WW32 CARD16-202ENST00000375706 686 ntAPPRIS P1 TSL 1 (best) BASIC4.57□□□□□ -1.68
HMGB4Q8WW32 CUBN-201ENST00000377823 705 ntTSL 3 BASIC4.57□□□□□ -1.68
HMGB4Q8WW32 RPS26P8-201ENST00000393490 348 ntBASIC4.57□□□□□ -1.68
HMGB4Q8WW32 SDHCP2-201ENST00000398565 501 ntBASIC4.57□□□□□ -1.68
HMGB4Q8WW32 U3.35-201ENST00000408405 208 ntBASIC4.57□□□□□ -1.68
HMGB4Q8WW32 C1D-204ENST00000410067 736 ntAPPRIS P1 TSL 1 (best) BASIC4.57□□□□□ -1.68
HMGB4Q8WW32 AC002456.1-203ENST00000412669 449 ntTSL 3 BASIC4.57□□□□□ -1.68
HMGB4Q8WW32 SETP15-201ENST00000412724 337 ntBASIC4.57□□□□□ -1.68
HMGB4Q8WW32 RPL23AP26-201ENST00000412728 464 ntBASIC4.57□□□□□ -1.68
HMGB4Q8WW32 AL133384.1-201ENST00000412744 351 ntBASIC4.57□□□□□ -1.68
HMGB4Q8WW32 SNRPFP1-201ENST00000414761 252 ntBASIC4.57□□□□□ -1.68
HMGB4Q8WW32 RPL7P57-201ENST00000423238 740 ntBASIC4.57□□□□□ -1.68
HMGB4Q8WW32 AL138785.1-201ENST00000425821 331 ntBASIC4.57□□□□□ -1.68
HMGB4Q8WW32 INTS6L-AS1-201ENST00000430820 398 ntTSL 3 BASIC4.57□□□□□ -1.68
HMGB4Q8WW32 AC241644.1-201ENST00000431525 446 ntTSL 3 BASIC4.57□□□□□ -1.68
HMGB4Q8WW32 AL161935.3-201ENST00000433770 347 ntTSL 2 BASIC4.57□□□□□ -1.68
HMGB4Q8WW32 AC122718.1-201ENST00000439448 744 ntBASIC4.57□□□□□ -1.68
HMGB4Q8WW32 RPL23AP16-201ENST00000441715 421 ntBASIC4.57□□□□□ -1.68
HMGB4Q8WW32 AC114877.1-201ENST00000446601 582 ntTSL 4 BASIC4.57□□□□□ -1.68
HMGB4Q8WW32 VPS29-202ENST00000447578 996 ntTSL 1 (best) BASIC4.57□□□□□ -1.68
HMGB4Q8WW32 RPL7L1P1-201ENST00000448259 785 ntBASIC4.57□□□□□ -1.68
HMGB4Q8WW32 MAST4-AS1-201ENST00000451496 777 ntTSL 2 BASIC4.57□□□□□ -1.68
HMGB4Q8WW32 DDX39BP2-208ENST00000453923 258 ntBASIC4.57□□□□□ -1.68
HMGB4Q8WW32 Z98749.1-201ENST00000454123 541 ntTSL 5 BASIC4.57□□□□□ -1.68
HMGB4Q8WW32 AL157373.1-201ENST00000456036 276 ntTSL 3 BASIC4.57□□□□□ -1.68
HMGB4Q8WW32 FAM133DP-201ENST00000464802 691 ntBASIC4.57□□□□□ -1.68
HMGB4Q8WW32 RPS20P21-201ENST00000466859 343 ntBASIC4.57□□□□□ -1.68
HMGB4Q8WW32 RPL7P19-201ENST00000469948 618 ntBASIC4.57□□□□□ -1.68
HMGB4Q8WW32 RPS3AP43-201ENST00000479743 781 ntBASIC4.57□□□□□ -1.68
HMGB4Q8WW32 NCOR1P1-202ENST00000486162 291 ntBASIC4.57□□□□□ -1.68
HMGB4Q8WW32 OCIAD1-AS1-201ENST00000513576 265 ntTSL 3 BASIC4.57□□□□□ -1.68
HMGB4Q8WW32 AC104619.2-201ENST00000514293 646 ntTSL 3 BASIC4.57□□□□□ -1.68
HMGB4Q8WW32 RNU6-583P-201ENST00000516012 92 ntBASIC4.57□□□□□ -1.68
HMGB4Q8WW32 MIR2116-201ENST00000517221 80 ntBASIC4.57□□□□□ -1.68
HMGB4Q8WW32 AP000827.1-201ENST00000527814 258 ntBASIC4.57□□□□□ -1.68
HMGB4Q8WW32 AC106028.2-201ENST00000555325 464 ntTSL 4 BASIC4.57□□□□□ -1.68
HMGB4Q8WW32 AL358333.2-201ENST00000556834 529 ntTSL 5 BASIC4.57□□□□□ -1.68
HMGB4Q8WW32 MIR3936-201ENST00000584304 110 ntBASIC4.57□□□□□ -1.68
HMGB4Q8WW32 AP001029.2-202ENST00000588197 739 ntTSL 3 BASIC4.57□□□□□ -1.68
HMGB4Q8WW32 TEX41-222ENST00000597173 1134 ntTSL 1 (best) BASIC4.57□□□□□ -1.68
HMGB4Q8WW32 AC110760.3-201ENST00000598794 467 ntBASIC4.57□□□□□ -1.68
HMGB4Q8WW32 AP000811.1-201ENST00000603803 651 ntBASIC4.57□□□□□ -1.68
HMGB4Q8WW32 AC124312.4-201ENST00000605533 310 ntBASIC4.57□□□□□ -1.68
HMGB4Q8WW32 AC113194.1-201ENST00000606037 500 ntBASIC4.57□□□□□ -1.68
HMGB4Q8WW32 AC020634.1-201ENST00000608701 549 ntBASIC4.57□□□□□ -1.68
HMGB4Q8WW32 C8orf59-207ENST00000611854 563 ntAPPRIS P1 TSL 2 BASIC4.57□□□□□ -1.68
HMGB4Q8WW32 AL354976.1-201ENST00000613843 387 ntBASIC4.57□□□□□ -1.68
HMGB4Q8WW32 AC122133.1-201ENST00000613964 233 ntBASIC4.57□□□□□ -1.68
HMGB4Q8WW32 AC068722.2-201ENST00000618734 544 ntBASIC4.57□□□□□ -1.68
HMGB4Q8WW32 AL391597.2-201ENST00000635698 479 ntTSL 5 BASIC4.57□□□□□ -1.68
HMGB4Q8WW32 CASP1-217ENST00000640184 327 ntTSL 1 (best) BASIC4.57□□□□□ -1.68
HMGB4Q8WW32 ITGB1-205ENST00000423113 3729 ntAPPRIS ALT1 TSL 5 BASIC4.57□□□□□ -1.68
HMGB4Q8WW32 IQCH-202ENST00000358767 3062 ntTSL 5 BASIC4.57□□□□□ -1.68
HMGB4Q8WW32 SRRM1-203ENST00000447431 3691 ntAPPRIS ALT2 TSL 5 BASIC4.57□□□□□ -1.68
HMGB4Q8WW32 ARHGEF12-202ENST00000397843 9660 ntAPPRIS P1 TSL 1 (best) BASIC4.57□□□□□ -1.68
HMGB4Q8WW32 LIMA1-214ENST00000552783 3612 ntAPPRIS ALT2 TSL 1 (best) BASIC4.57□□□□□ -1.68
HMGB4Q8WW32 MFSD8-242ENST00000641690 4199 ntBASIC4.57□□□□□ -1.68
HMGB4Q8WW32 CDKL3-209ENST00000523054 1775 ntTSL 2 BASIC4.57□□□□□ -1.68
HMGB4Q8WW32 AC104260.2-201ENST00000623551 3497 ntBASIC4.57□□□□□ -1.68
HMGB4Q8WW32 SLC9C1-201ENST00000305815 4172 ntAPPRIS P3 TSL 2 BASIC4.57□□□□□ -1.68
HMGB4Q8WW32 ABCA13-204ENST00000435803 17184 ntAPPRIS P2 TSL 1 (best) BASIC4.56□□□□□ -1.68
HMGB4Q8WW32 KLHL13-201ENST00000262820 3972 ntAPPRIS P3 TSL 1 (best) BASIC4.56□□□□□ -1.68
HMGB4Q8WW32 SLC26A7-209ENST00000617078 5094 ntTSL 5 BASIC4.56□□□□□ -1.68
HMGB4Q8WW32 MTND5P24-201ENST00000438892 1767 ntBASIC4.56□□□□□ -1.68
HMGB4Q8WW32 KLRC1-201ENST00000347831 1332 ntAPPRIS ALT2 TSL 1 (best) BASIC4.56□□□□□ -1.68
HMGB4Q8WW32 SDC2-204ENST00000519914 1318 ntTSL 2 BASIC4.56□□□□□ -1.68
HMGB4Q8WW32 OR5BR1P-201ENST00000524992 1330 ntBASIC4.56□□□□□ -1.68
HMGB4Q8WW32 LINS1-201ENST00000314742 4821 ntAPPRIS P1 TSL 5 BASIC4.56□□□□□ -1.68
HMGB4Q8WW32 AC087359.1-201ENST00000508335 1740 ntBASIC4.56□□□□□ -1.68
HMGB4Q8WW32 SKINT1L-201ENST00000401057 817 ntBASIC4.56□□□□□ -1.68
HMGB4Q8WW32 RNU6ATAC34P-201ENST00000408879 121 ntBASIC4.56□□□□□ -1.68
HMGB4Q8WW32 AC073264.1-201ENST00000411508 416 ntBASIC4.56□□□□□ -1.68
HMGB4Q8WW32 USP9YP33-201ENST00000412220 421 ntBASIC4.56□□□□□ -1.68
HMGB4Q8WW32 AC007738.1-201ENST00000413892 348 ntBASIC4.56□□□□□ -1.68
HMGB4Q8WW32 ITCH-IT1-201ENST00000418598 208 ntTSL 3 BASIC4.56□□□□□ -1.68
Retrieved 100 of 98,524 protein–RNA pairs in 76.3 ms