Protein–RNA interactions for Protein: Q8NE63

HIPK4, Homeodomain-interacting protein kinase 4, humanhuman

Predictions only

Length 616 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HIPK4Q8NE63 ABBA01000935.2-201ENST00000637477 838 ntBASIC5.07□□□□□ -1.6
HIPK4Q8NE63 EPHA3-202ENST00000452448 2546 ntTSL 1 (best) BASIC5.07□□□□□ -1.6
HIPK4Q8NE63 CENPE-208ENST00000611174 8260 ntTSL 5 BASIC5.07□□□□□ -1.6
HIPK4Q8NE63 SNX10-202ENST00000396376 2491 ntAPPRIS P2 TSL 1 (best) BASIC5.07□□□□□ -1.6
HIPK4Q8NE63 CASC19-201ENST00000500112 5735 ntTSL 1 (best) BASIC5.07□□□□□ -1.6
HIPK4Q8NE63 CFHR3-205ENST00000471440 1965 ntTSL 1 (best) BASIC5.07□□□□□ -1.6
HIPK4Q8NE63 ING3-201ENST00000315870 3777 ntAPPRIS P1 TSL 1 (best) BASIC5.07□□□□□ -1.6
HIPK4Q8NE63 PSG7-206ENST00000623675 1392 ntTSL 1 (best) BASIC5.06□□□□□ -1.6
HIPK4Q8NE63 AIG1-208ENST00000494282 3393 ntTSL 1 (best) BASIC5.06□□□□□ -1.6
HIPK4Q8NE63 ZNF652P1-201ENST00000442420 1309 ntBASIC5.06□□□□□ -1.6
HIPK4Q8NE63 OR55B1P-203ENST00000641518 2602 ntBASIC5.06□□□□□ -1.6
HIPK4Q8NE63 ALB-201ENST00000295897 2263 ntAPPRIS P1 TSL 1 (best) BASIC5.06□□□□□ -1.6
HIPK4Q8NE63 Y_RNA.70-201ENST00000362886 110 ntBASIC5.06□□□□□ -1.6
HIPK4Q8NE63 RNU6-797P-201ENST00000363101 109 ntBASIC5.06□□□□□ -1.6
HIPK4Q8NE63 UBBP2-201ENST00000376781 231 ntBASIC5.06□□□□□ -1.6
HIPK4Q8NE63 RNU6-1103P-201ENST00000384150 107 ntBASIC5.06□□□□□ -1.6
HIPK4Q8NE63 MFAP5-202ENST00000396549 1195 ntTSL 2 BASIC5.06□□□□□ -1.6
HIPK4Q8NE63 DBIP1-201ENST00000401435 260 ntBASIC5.06□□□□□ -1.6
HIPK4Q8NE63 AC138393.2-201ENST00000414742 246 ntBASIC5.06□□□□□ -1.6
HIPK4Q8NE63 RPS3AP9-201ENST00000417027 792 ntBASIC5.06□□□□□ -1.6
HIPK4Q8NE63 AC009302.1-201ENST00000417147 390 ntBASIC5.06□□□□□ -1.6
HIPK4Q8NE63 AL162430.2-201ENST00000422306 435 ntTSL 3 BASIC5.06□□□□□ -1.6
HIPK4Q8NE63 AC104170.2-201ENST00000424246 678 ntTSL 3 BASIC5.06□□□□□ -1.6
HIPK4Q8NE63 AL021153.1-201ENST00000427360 308 ntTSL 3 BASIC5.06□□□□□ -1.6
HIPK4Q8NE63 ISCA1P6-201ENST00000427740 390 ntBASIC5.06□□□□□ -1.6
HIPK4Q8NE63 ELOCP14-201ENST00000428070 331 ntBASIC5.06□□□□□ -1.6
HIPK4Q8NE63 AP001476.3-201ENST00000429512 415 ntTSL 3 BASIC5.06□□□□□ -1.6
HIPK4Q8NE63 AL389925.1-201ENST00000432257 728 ntBASIC5.06□□□□□ -1.6
HIPK4Q8NE63 ELOCP7-201ENST00000439968 331 ntBASIC5.06□□□□□ -1.6
HIPK4Q8NE63 AL356124.2-201ENST00000442449 391 ntTSL 5 BASIC5.06□□□□□ -1.6
HIPK4Q8NE63 RPL17P49-201ENST00000443728 411 ntBASIC5.06□□□□□ -1.6
HIPK4Q8NE63 RPS26P56-201ENST00000444468 240 ntBASIC5.06□□□□□ -1.6
HIPK4Q8NE63 AC004980.3-201ENST00000447046 365 ntBASIC5.06□□□□□ -1.6
HIPK4Q8NE63 MTND2P24-201ENST00000453434 806 ntBASIC5.06□□□□□ -1.6
HIPK4Q8NE63 VN1R5-201ENST00000472952 1239 ntAPPRIS P1 BASIC5.06□□□□□ -1.6
HIPK4Q8NE63 AC092754.1-201ENST00000472975 479 ntBASIC5.06□□□□□ -1.6
HIPK4Q8NE63 AC041039.1-201ENST00000485656 536 ntBASIC5.06□□□□□ -1.6
HIPK4Q8NE63 CASP12-210ENST00000494737 961 ntTSL 1 (best) BASIC5.06□□□□□ -1.6
HIPK4Q8NE63 EIF4E-208ENST00000505992 898 ntTSL 5 BASIC5.06□□□□□ -1.6
HIPK4Q8NE63 AC008243.1-202ENST00000506527 481 ntTSL 5 BASIC5.06□□□□□ -1.6
HIPK4Q8NE63 HMGB3P16-201ENST00000508037 287 ntBASIC5.06□□□□□ -1.6
HIPK4Q8NE63 AC083795.2-201ENST00000510034 610 ntTSL 3 BASIC5.06□□□□□ -1.6
HIPK4Q8NE63 MTND6P2-201ENST00000512226 524 ntBASIC5.06□□□□□ -1.6
HIPK4Q8NE63 Y_RNA.702-201ENST00000516843 96 ntBASIC5.06□□□□□ -1.6
HIPK4Q8NE63 AC026991.1-201ENST00000520815 463 ntTSL 3 BASIC5.06□□□□□ -1.6
HIPK4Q8NE63 TRIM77BP-201ENST00000524985 1119 ntBASIC5.06□□□□□ -1.6
HIPK4Q8NE63 AP001646.1-201ENST00000527936 915 ntBASIC5.06□□□□□ -1.6
HIPK4Q8NE63 AP000873.2-204ENST00000530825 375 ntTSL 3 BASIC5.06□□□□□ -1.6
HIPK4Q8NE63 AP003557.1-201ENST00000531715 585 ntTSL 3 BASIC5.06□□□□□ -1.6
HIPK4Q8NE63 AC090023.2-201ENST00000540875 545 ntTSL 3 BASIC5.06□□□□□ -1.6
HIPK4Q8NE63 MFAP5-212ENST00000543369 972 ntTSL 3 BASIC5.06□□□□□ -1.6
HIPK4Q8NE63 LINC00520-201ENST00000554186 831 ntTSL 5 BASIC5.06□□□□□ -1.6
HIPK4Q8NE63 AC079075.2-201ENST00000557964 449 ntTSL 4 BASIC5.06□□□□□ -1.6
HIPK4Q8NE63 MRPS21P7-201ENST00000566937 238 ntBASIC5.06□□□□□ -1.6
HIPK4Q8NE63 AC099313.1-201ENST00000568437 452 ntTSL 2 BASIC5.06□□□□□ -1.6
HIPK4Q8NE63 AC015845.1-202ENST00000580184 242 ntTSL 3 BASIC5.06□□□□□ -1.6
HIPK4Q8NE63 AC011840.5-201ENST00000582125 771 ntBASIC5.06□□□□□ -1.6
HIPK4Q8NE63 MOCS2-209ENST00000582677 741 ntTSL 5 BASIC5.06□□□□□ -1.6
HIPK4Q8NE63 AC007448.2-201ENST00000583452 380 ntTSL 3 BASIC5.06□□□□□ -1.6
HIPK4Q8NE63 AL136084.2-212ENST00000589976 654 ntTSL 5 BASIC5.06□□□□□ -1.6
HIPK4Q8NE63 ZNF682-204ENST00000593468 581 ntTSL 4 BASIC5.06□□□□□ -1.6
HIPK4Q8NE63 AC010618.3-202ENST00000598141 476 ntTSL 3 BASIC5.06□□□□□ -1.6
HIPK4Q8NE63 AC004160.1-202ENST00000599917 578 ntTSL 5 BASIC5.06□□□□□ -1.6
HIPK4Q8NE63 CKS1BP3-201ENST00000600888 237 ntBASIC5.06□□□□□ -1.6
HIPK4Q8NE63 AC103792.1-201ENST00000603591 919 ntBASIC5.06□□□□□ -1.6
HIPK4Q8NE63 AC008277.2-201ENST00000605196 797 ntBASIC5.06□□□□□ -1.6
HIPK4Q8NE63 AL096712.1-201ENST00000614561 159 ntBASIC5.06□□□□□ -1.6
HIPK4Q8NE63 AP005431.1-201ENST00000618479 319 ntBASIC5.06□□□□□ -1.6
HIPK4Q8NE63 BTG3-AS1-201ENST00000626994 552 ntTSL 4 BASIC5.06□□□□□ -1.6
HIPK4Q8NE63 AC092017.3-201ENST00000638880 536 ntAPPRIS P1 TSL 5 BASIC5.06□□□□□ -1.6
HIPK4Q8NE63 AC092375.1-202ENST00000639452 404 ntTSL 3 BASIC5.06□□□□□ -1.6
HIPK4Q8NE63 LCMT1-AS2-202ENST00000565214 5666 ntBASIC5.06□□□□□ -1.6
HIPK4Q8NE63 HSPA13-201ENST00000285667 3986 ntAPPRIS P1 TSL 1 (best) BASIC5.06□□□□□ -1.6
HIPK4Q8NE63 DGKH-206ENST00000536612 3957 ntTSL 1 (best) BASIC5.06□□□□□ -1.6
HIPK4Q8NE63 RXFP1-206ENST00000460056 2735 ntTSL 2 BASIC5.06□□□□□ -1.6
HIPK4Q8NE63 RCOR3-201ENST00000367005 4246 ntTSL 1 (best) BASIC5.06□□□□□ -1.6
HIPK4Q8NE63 PPP1R9A-207ENST00000433881 9928 ntAPPRIS P1 TSL 5 BASIC5.06□□□□□ -1.6
HIPK4Q8NE63 SDCBP-213ENST00000630925 2076 ntTSL 5 BASIC5.06□□□□□ -1.6
HIPK4Q8NE63 SLC2A3P1-201ENST00000519666 1451 ntBASIC5.06□□□□□ -1.6
HIPK4Q8NE63 ZNF468-203ENST00000595646 4407 ntAPPRIS P1 TSL 1 (best) BASIC5.06□□□□□ -1.6
HIPK4Q8NE63 ATF7IP-214ENST00000540793 4142 ntAPPRIS P3 TSL 1 (best) BASIC5.06□□□□□ -1.6
HIPK4Q8NE63 ALB-209ENST00000503124 1741 ntTSL 5 BASIC5.06□□□□□ -1.6
HIPK4Q8NE63 HSFY2-201ENST00000304790 1444 ntAPPRIS P5 TSL 1 (best) BASIC5.06□□□□□ -1.6
HIPK4Q8NE63 HSFY1-201ENST00000307393 1444 ntAPPRIS P5 TSL 1 (best) BASIC5.06□□□□□ -1.6
HIPK4Q8NE63 ZNF181-203ENST00000459757 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC5.06□□□□□ -1.6
HIPK4Q8NE63 CASC19-221ENST00000641309 1382 ntBASIC5.05□□□□□ -1.6
HIPK4Q8NE63 HMCN1-201ENST00000271588 18208 ntAPPRIS P1 TSL 1 (best) BASIC5.05□□□□□ -1.6
HIPK4Q8NE63 ANKRD34C-201ENST00000421388 4951 ntAPPRIS P1 BASIC5.05□□□□□ -1.6
HIPK4Q8NE63 MATR3-228ENST00000620916 3134 ntTSL 5 BASIC5.05□□□□□ -1.6
HIPK4Q8NE63 CHRM2-203ENST00000445907 5918 ntAPPRIS P1 TSL 1 (best) BASIC5.05□□□□□ -1.6
HIPK4Q8NE63 CSMD3-203ENST00000343508 13018 ntTSL 1 (best) BASIC5.05□□□□□ -1.6
HIPK4Q8NE63 GNG5P1-201ENST00000255500 204 ntBASIC5.05□□□□□ -1.6
HIPK4Q8NE63 HSFY1-202ENST00000309834 1038 ntAPPRIS ALT2 TSL 1 (best) BASIC5.05□□□□□ -1.6
HIPK4Q8NE63 HSFY2-202ENST00000344884 1038 ntAPPRIS ALT2 TSL 1 (best) BASIC5.05□□□□□ -1.6
HIPK4Q8NE63 RNA5SP223-201ENST00000365174 120 ntBASIC5.05□□□□□ -1.6
HIPK4Q8NE63 AL031679.1-201ENST00000400616 525 ntBASIC5.05□□□□□ -1.6
HIPK4Q8NE63 RPA3-203ENST00000401447 414 ntTSL 3 BASIC5.05□□□□□ -1.6
HIPK4Q8NE63 RPL7P25-201ENST00000404151 721 ntBASIC5.05□□□□□ -1.6
HIPK4Q8NE63 AL139413.1-201ENST00000421309 217 ntBASIC5.05□□□□□ -1.6
HIPK4Q8NE63 PIGFP2-201ENST00000421400 651 ntBASIC5.05□□□□□ -1.6
Retrieved 100 of 98,524 protein–RNA pairs in 81.5 ms