Protein–RNA interactions for Protein: Q8IV63

VRK3, Inactive serine/threonine-protein kinase VRK3, humanhuman

Predictions only

Length 474 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3Q8IV63 IQCH-202ENST00000358767 3062 ntTSL 5 BASIC4.76□□□□□ -1.65
VRK3Q8IV63 S100A9-201ENST00000368738 577 ntAPPRIS P1 TSL 1 (best) BASIC4.76□□□□□ -1.65
VRK3Q8IV63 Y_RNA.402-201ENST00000383972 102 ntBASIC4.76□□□□□ -1.65
VRK3Q8IV63 MT-TD-201ENST00000387419 68 ntBASIC4.76□□□□□ -1.65
VRK3Q8IV63 SNORA40.3-201ENST00000390964 122 ntBASIC4.76□□□□□ -1.65
VRK3Q8IV63 KRTAP3-2-201ENST00000391587 702 ntAPPRIS P1 BASIC4.76□□□□□ -1.65
VRK3Q8IV63 MTCO3P40-201ENST00000392516 676 ntBASIC4.76□□□□□ -1.65
VRK3Q8IV63 AL034370.1-201ENST00000397254 1590 ntBASIC4.76□□□□□ -1.65
VRK3Q8IV63 AL645733.1-201ENST00000402250 217 ntBASIC4.76□□□□□ -1.65
VRK3Q8IV63 SNORA11B-201ENST00000408175 129 ntBASIC4.76□□□□□ -1.65
VRK3Q8IV63 LSM5-205ENST00000409952 687 ntTSL 4 BASIC4.76□□□□□ -1.65
VRK3Q8IV63 OR51A3P-201ENST00000413596 924 ntBASIC4.76□□□□□ -1.65
VRK3Q8IV63 AC098820.3-201ENST00000414135 976 ntTSL 3 BASIC4.76□□□□□ -1.65
VRK3Q8IV63 USP9YP13-201ENST00000417797 480 ntBASIC4.76□□□□□ -1.65
VRK3Q8IV63 USP9YP20-201ENST00000419224 558 ntBASIC4.76□□□□□ -1.65
VRK3Q8IV63 B3GALNT1P1-201ENST00000420569 975 ntBASIC4.76□□□□□ -1.65
VRK3Q8IV63 AL645608.4-201ENST00000423619 154 ntBASIC4.76□□□□□ -1.65
VRK3Q8IV63 SOCS5P3-201ENST00000425115 1576 ntBASIC4.76□□□□□ -1.65
VRK3Q8IV63 AL590762.4-201ENST00000425885 253 ntBASIC4.76□□□□□ -1.65
VRK3Q8IV63 DPY19L1P2-201ENST00000426647 915 ntBASIC4.76□□□□□ -1.65
VRK3Q8IV63 AP001599.1-201ENST00000426771 361 ntTSL 3 BASIC4.76□□□□□ -1.65
VRK3Q8IV63 NPM1P24-201ENST00000428039 894 ntBASIC4.76□□□□□ -1.65
VRK3Q8IV63 AC092162.1-201ENST00000432828 434 ntBASIC4.76□□□□□ -1.65
VRK3Q8IV63 RPL12P3-201ENST00000440080 396 ntBASIC4.76□□□□□ -1.65
VRK3Q8IV63 AP000936.1-201ENST00000442124 483 ntTSL 5 BASIC4.76□□□□□ -1.65
VRK3Q8IV63 RPS4XP4-201ENST00000443195 763 ntBASIC4.76□□□□□ -1.65
VRK3Q8IV63 Z73495.1-201ENST00000444982 147 ntTSL 3 BASIC4.76□□□□□ -1.65
VRK3Q8IV63 AL356421.2-201ENST00000446733 197 ntTSL 3 BASIC4.76□□□□□ -1.65
VRK3Q8IV63 RPL39P6-201ENST00000448289 150 ntBASIC4.76□□□□□ -1.65
VRK3Q8IV63 SPIN4-AS1-201ENST00000451979 426 ntTSL 2 BASIC4.76□□□□□ -1.65
VRK3Q8IV63 RAP1GDS1-206ENST00000453712 2470 ntAPPRIS ALT1 TSL 1 (best) BASIC4.76□□□□□ -1.65
VRK3Q8IV63 AL033528.1-201ENST00000453780 140 ntBASIC4.76□□□□□ -1.65
VRK3Q8IV63 RPS27L-205ENST00000462430 681 ntTSL 2 BASIC4.76□□□□□ -1.65
VRK3Q8IV63 RN7SL591P-201ENST00000496150 292 ntBASIC4.76□□□□□ -1.65
VRK3Q8IV63 SETP14-201ENST00000497538 873 ntBASIC4.76□□□□□ -1.65
VRK3Q8IV63 LINC02005-201ENST00000498832 782 ntTSL 3 BASIC4.76□□□□□ -1.65
VRK3Q8IV63 EPGN-204ENST00000502358 312 ntTSL 1 (best) BASIC4.76□□□□□ -1.65
VRK3Q8IV63 EPGN-206ENST00000503098 339 ntTSL 1 (best) BASIC4.76□□□□□ -1.65
VRK3Q8IV63 MTND5P5-201ENST00000503764 376 ntBASIC4.76□□□□□ -1.65
VRK3Q8IV63 EPGN-207ENST00000505212 285 ntTSL 1 (best) BASIC4.76□□□□□ -1.65
VRK3Q8IV63 GAPDHP56-201ENST00000506031 988 ntBASIC4.76□□□□□ -1.65
VRK3Q8IV63 IL7R-204ENST00000506850 1004 ntTSL 2 BASIC4.76□□□□□ -1.65
VRK3Q8IV63 AC099520.1-203ENST00000506976 464 ntTSL 3 BASIC4.76□□□□□ -1.65
VRK3Q8IV63 EPGN-209ENST00000514968 312 ntTSL 1 (best) BASIC4.76□□□□□ -1.65
VRK3Q8IV63 RFPL4AP3-201ENST00000515267 345 ntBASIC4.76□□□□□ -1.65
VRK3Q8IV63 SCARNA15.1-201ENST00000516384 125 ntBASIC4.76□□□□□ -1.65
VRK3Q8IV63 AC139497.1-201ENST00000524042 501 ntTSL 5 BASIC4.76□□□□□ -1.65
VRK3Q8IV63 AP005639.2-201ENST00000527592 928 ntBASIC4.76□□□□□ -1.65
VRK3Q8IV63 AC024909.1-201ENST00000549278 599 ntTSL 4 BASIC4.76□□□□□ -1.65
VRK3Q8IV63 AC007448.1-201ENST00000582714 234 ntBASIC4.76□□□□□ -1.65
VRK3Q8IV63 TTN-AS1-212ENST00000582847 1036 ntTSL 5 BASIC4.76□□□□□ -1.65
VRK3Q8IV63 AC004596.1-201ENST00000586560 528 ntTSL 3 BASIC4.76□□□□□ -1.65
VRK3Q8IV63 AL354733.2-209ENST00000589233 1434 ntTSL 2 BASIC4.76□□□□□ -1.65
VRK3Q8IV63 AC011487.3-201ENST00000593607 453 ntBASIC4.76□□□□□ -1.65
VRK3Q8IV63 AC087783.2-201ENST00000605070 562 ntBASIC4.76□□□□□ -1.65
VRK3Q8IV63 AC005332.6-201ENST00000613178 446 ntBASIC4.76□□□□□ -1.65
VRK3Q8IV63 AL591926.2-202ENST00000615199 719 ntTSL 5 BASIC4.76□□□□□ -1.65
VRK3Q8IV63 AC027807.2-201ENST00000616099 408 ntBASIC4.76□□□□□ -1.65
VRK3Q8IV63 AC136475.10-201ENST00000620253 385 ntBASIC4.76□□□□□ -1.65
VRK3Q8IV63 AL359880.1-201ENST00000621879 266 ntBASIC4.76□□□□□ -1.65
VRK3Q8IV63 AC120349.2-201ENST00000625002 298 ntBASIC4.76□□□□□ -1.65
VRK3Q8IV63 OR4K15-202ENST00000641512 1216 ntAPPRIS P1 BASIC4.76□□□□□ -1.65
VRK3Q8IV63 C2orf83-206ENST00000642055 453 ntAPPRIS P3 BASIC4.76□□□□□ -1.65
VRK3Q8IV63 SAMMSON-226ENST00000642089 1582 ntBASIC4.76□□□□□ -1.65
VRK3Q8IV63 SULF1-204ENST00000458141 5551 ntAPPRIS P1 TSL 1 (best) BASIC4.76□□□□□ -1.65
VRK3Q8IV63 AL672167.1-204ENST00000641875 3017 ntBASIC4.76□□□□□ -1.65
VRK3Q8IV63 PCDH9-201ENST00000377861 28227 ntTSL 1 (best) BASIC4.76□□□□□ -1.65
VRK3Q8IV63 VPS13D-213ENST00000613099 16245 ntAPPRIS ALT1 TSL 1 (best) BASIC4.76□□□□□ -1.65
VRK3Q8IV63 DNAJC10-208ENST00000537515 1669 ntTSL 1 (best) BASIC4.76□□□□□ -1.65
VRK3Q8IV63 GOLPH3L-201ENST00000271732 2999 ntAPPRIS P1 TSL 1 (best) BASIC4.76□□□□□ -1.65
VRK3Q8IV63 USP26-203ENST00000511190 3665 ntAPPRIS P1 TSL 2 BASIC4.76□□□□□ -1.65
VRK3Q8IV63 AC117529.2-201ENST00000512159 2068 ntBASIC4.76□□□□□ -1.65
VRK3Q8IV63 CASC17-201ENST00000569074 2059 ntTSL 1 (best) BASIC4.76□□□□□ -1.65
VRK3Q8IV63 LTN1-202ENST00000389194 7749 ntTSL 1 (best) BASIC4.76□□□□□ -1.65
VRK3Q8IV63 PSG1-204ENST00000436291 2047 ntAPPRIS ALT2 TSL 1 (best) BASIC4.75□□□□□ -1.65
VRK3Q8IV63 GYS2-201ENST00000261195 3132 ntAPPRIS P1 TSL 1 (best) BASIC4.75□□□□□ -1.65
VRK3Q8IV63 CNTN5-207ENST00000527185 4303 ntTSL 1 (best) BASIC4.75□□□□□ -1.65
VRK3Q8IV63 ABCA13-204ENST00000435803 17184 ntAPPRIS P2 TSL 1 (best) BASIC4.75□□□□□ -1.65
VRK3Q8IV63 GABPB1-204ENST00000396464 1401 ntTSL 1 (best) BASIC4.75□□□□□ -1.65
VRK3Q8IV63 GABRA2-211ENST00000514090 3401 ntAPPRIS P1 TSL 5 BASIC4.75□□□□□ -1.65
VRK3Q8IV63 GNAS-202ENST00000306090 477 ntTSL 5 BASIC4.75□□□□□ -1.65
VRK3Q8IV63 RNA5SP191-201ENST00000362585 102 ntBASIC4.75□□□□□ -1.65
VRK3Q8IV63 Y_RNA.263-201ENST00000364659 114 ntBASIC4.75□□□□□ -1.65
VRK3Q8IV63 RNU5E-5P-201ENST00000365379 116 ntBASIC4.75□□□□□ -1.65
VRK3Q8IV63 COX6B1P1-201ENST00000415962 213 ntBASIC4.75□□□□□ -1.65
VRK3Q8IV63 LINC01853-201ENST00000417715 444 ntTSL 3 BASIC4.75□□□□□ -1.65
VRK3Q8IV63 RGS17P1-201ENST00000423358 553 ntBASIC4.75□□□□□ -1.65
VRK3Q8IV63 AC093698.1-201ENST00000423843 571 ntBASIC4.75□□□□□ -1.65
VRK3Q8IV63 AC099060.1-201ENST00000427806 448 ntTSL 3 BASIC4.75□□□□□ -1.65
VRK3Q8IV63 SKP1P3-201ENST00000429280 487 ntBASIC4.75□□□□□ -1.65
VRK3Q8IV63 AL139230.1-201ENST00000440094 425 ntTSL 3 BASIC4.75□□□□□ -1.65
VRK3Q8IV63 AC104306.1-201ENST00000449702 371 ntBASIC4.75□□□□□ -1.65
VRK3Q8IV63 AC017101.1-201ENST00000453665 571 ntTSL 4 BASIC4.75□□□□□ -1.65
VRK3Q8IV63 AC090686.1-201ENST00000481577 749 ntBASIC4.75□□□□□ -1.65
VRK3Q8IV63 RN7SL558P-201ENST00000497468 299 ntBASIC4.75□□□□□ -1.65
VRK3Q8IV63 AC093909.2-201ENST00000505178 437 ntTSL 3 BASIC4.75□□□□□ -1.65
VRK3Q8IV63 AC093689.1-203ENST00000505967 299 ntTSL 3 BASIC4.75□□□□□ -1.65
VRK3Q8IV63 NDUFB5P1-201ENST00000508134 564 ntBASIC4.75□□□□□ -1.65
VRK3Q8IV63 RNU6-430P-201ENST00000517078 107 ntBASIC4.75□□□□□ -1.65
VRK3Q8IV63 RNU6-709P-201ENST00000517257 104 ntBASIC4.75□□□□□ -1.65
Retrieved 100 of 98,524 protein–RNA pairs in 123.5 ms