Protein–RNA interactions for Protein: P55290

CDH13, Cadherin-13, humanhuman

Predictions only

Length 713 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH13P55290 RNU6-398P-201ENST00000384143 109 ntBASIC4.07□□□□□ -1.76
CDH13P55290 MIR153-1-201ENST00000384914 90 ntBASIC4.07□□□□□ -1.76
CDH13P55290 TRBV24-1-201ENST00000390397 381 ntAPPRIS P1 BASIC4.07□□□□□ -1.76
CDH13P55290 AC073264.1-201ENST00000411508 416 ntBASIC4.07□□□□□ -1.76
CDH13P55290 AL133384.1-201ENST00000412744 351 ntBASIC4.07□□□□□ -1.76
CDH13P55290 MTND4P22-201ENST00000413116 1169 ntBASIC4.07□□□□□ -1.76
CDH13P55290 AC096559.1-201ENST00000414086 399 ntTSL 2 BASIC4.07□□□□□ -1.76
CDH13P55290 AL592310.1-201ENST00000414330 671 ntBASIC4.07□□□□□ -1.76
CDH13P55290 AC009276.1-201ENST00000422042 253 ntTSL 5 BASIC4.07□□□□□ -1.76
CDH13P55290 AC116035.1-201ENST00000431057 517 ntTSL 3 BASIC4.07□□□□□ -1.76
CDH13P55290 USP9YP31-201ENST00000431405 881 ntBASIC4.07□□□□□ -1.76
CDH13P55290 AL050349.1-201ENST00000441029 401 ntTSL 2 BASIC4.07□□□□□ -1.76
CDH13P55290 AP000844.1-201ENST00000446631 577 ntTSL 3 BASIC4.07□□□□□ -1.76
CDH13P55290 VPS29-202ENST00000447578 996 ntTSL 1 (best) BASIC4.07□□□□□ -1.76
CDH13P55290 SBDSP1-204ENST00000453858 737 ntBASIC4.07□□□□□ -1.76
CDH13P55290 RAD23BP3-201ENST00000454157 1152 ntBASIC4.07□□□□□ -1.76
CDH13P55290 PTCHD1-AS-201ENST00000455399 718 ntTSL 3 BASIC4.07□□□□□ -1.76
CDH13P55290 MTCO3P2-201ENST00000457365 171 ntBASIC4.07□□□□□ -1.76
CDH13P55290 AL589765.1-201ENST00000457548 386 ntTSL 2 BASIC4.07□□□□□ -1.76
CDH13P55290 AC010307.1-201ENST00000467206 836 ntBASIC4.07□□□□□ -1.76
CDH13P55290 RN7SL810P-201ENST00000493031 276 ntBASIC4.07□□□□□ -1.76
CDH13P55290 ZBTB20-AS3-201ENST00000498630 464 ntTSL 3 BASIC4.07□□□□□ -1.76
CDH13P55290 PRELID3BP7-201ENST00000503606 469 ntBASIC4.07□□□□□ -1.76
CDH13P55290 AC112178.1-201ENST00000511165 676 ntTSL 3 BASIC4.07□□□□□ -1.76
CDH13P55290 RNA5SP49-201ENST00000516450 115 ntBASIC4.07□□□□□ -1.76
CDH13P55290 SNORA48.10-201ENST00000516965 160 ntBASIC4.07□□□□□ -1.76
CDH13P55290 AC022784.3-202ENST00000517816 826 ntTSL 3 BASIC4.07□□□□□ -1.76
CDH13P55290 AC120193.1-201ENST00000518988 741 ntTSL 2 BASIC4.07□□□□□ -1.76
CDH13P55290 AC136424.2-201ENST00000522582 563 ntTSL 4 BASIC4.07□□□□□ -1.76
CDH13P55290 OR8L1P-201ENST00000534005 955 ntBASIC4.07□□□□□ -1.76
CDH13P55290 AC009803.2-201ENST00000550378 665 ntTSL 5 BASIC4.07□□□□□ -1.76
CDH13P55290 LSM6P2-201ENST00000552208 177 ntBASIC4.07□□□□□ -1.76
CDH13P55290 AL355096.1-201ENST00000553561 447 ntTSL 3 BASIC4.07□□□□□ -1.76
CDH13P55290 LINC00520-201ENST00000554186 831 ntTSL 5 BASIC4.07□□□□□ -1.76
CDH13P55290 AL358333.1-201ENST00000555115 467 ntTSL 3 BASIC4.07□□□□□ -1.76
CDH13P55290 JKAMP-212ENST00000556985 592 ntTSL 2 BASIC4.07□□□□□ -1.76
CDH13P55290 GTF2IP8-201ENST00000560687 584 ntBASIC4.07□□□□□ -1.76
CDH13P55290 AC090695.1-201ENST00000561269 1222 ntBASIC4.07□□□□□ -1.76
CDH13P55290 SULT1C2P1-202ENST00000562418 459 ntBASIC4.07□□□□□ -1.76
CDH13P55290 AC018554.1-201ENST00000565506 800 ntTSL 2 BASIC4.07□□□□□ -1.76
CDH13P55290 AC007599.1-201ENST00000568688 1174 ntBASIC4.07□□□□□ -1.76
CDH13P55290 SNORD39.3-201ENST00000584451 71 ntBASIC4.07□□□□□ -1.76
CDH13P55290 LINC01533-202ENST00000588694 632 ntTSL 2 BASIC4.07□□□□□ -1.76
CDH13P55290 AP001269.3-201ENST00000588718 329 ntBASIC4.07□□□□□ -1.76
CDH13P55290 AL450336.1-201ENST00000605180 586 ntBASIC4.07□□□□□ -1.76
CDH13P55290 AC116651.1-201ENST00000609724 556 ntBASIC4.07□□□□□ -1.76
CDH13P55290 AC004948.1-201ENST00000609858 672 ntBASIC4.07□□□□□ -1.76
CDH13P55290 AC022509.4-201ENST00000621404 572 ntBASIC4.07□□□□□ -1.76
CDH13P55290 AC109462.4-201ENST00000637882 581 ntTSL 5 BASIC4.07□□□□□ -1.76
CDH13P55290 PCDH11X-206ENST00000373097 9146 ntAPPRIS ALT2 TSL 1 (best) BASIC4.07□□□□□ -1.76
CDH13P55290 SLC38A9-223ENST00000515629 2673 ntTSL 2 BASIC4.07□□□□□ -1.76
CDH13P55290 SCN3A-201ENST00000283254 9091 ntAPPRIS P3 TSL 1 (best) BASIC4.06□□□□□ -1.76
CDH13P55290 NUP35-201ENST00000295119 1633 ntAPPRIS P1 TSL 1 (best) BASIC4.06□□□□□ -1.76
CDH13P55290 ZSCAN26-204ENST00000614088 2321 ntTSL 3 BASIC4.06□□□□□ -1.76
CDH13P55290 FER-202ENST00000438717 1531 ntTSL 2 BASIC4.06□□□□□ -1.76
CDH13P55290 POLR2B-201ENST00000314595 3748 ntAPPRIS P1 TSL 1 (best) BASIC4.06□□□□□ -1.76
CDH13P55290 AL136964.1-201ENST00000622038 2990 ntBASIC4.06□□□□□ -1.76
CDH13P55290 AC073429.2-201ENST00000569694 1444 ntBASIC4.06□□□□□ -1.76
CDH13P55290 SLC38A2-209ENST00000551374 2802 ntTSL 2 BASIC4.06□□□□□ -1.76
CDH13P55290 PNPT1P2-201ENST00000456768 2050 ntBASIC4.06□□□□□ -1.76
CDH13P55290 AC018555.1-201ENST00000567548 1980 ntBASIC4.06□□□□□ -1.76
CDH13P55290 SPINT4-201ENST00000279058 512 ntAPPRIS P1 TSL 1 (best) BASIC4.06□□□□□ -1.76
CDH13P55290 DNASE2B-202ENST00000370665 1269 ntAPPRIS P1 TSL 1 (best) BASIC4.06□□□□□ -1.76
CDH13P55290 RNU6-1279P-201ENST00000383917 103 ntBASIC4.06□□□□□ -1.76
CDH13P55290 RNU6-636P-201ENST00000384598 107 ntBASIC4.06□□□□□ -1.76
CDH13P55290 MIR506-201ENST00000384998 124 ntBASIC4.06□□□□□ -1.76
CDH13P55290 HNMT-204ENST00000410115 1150 ntAPPRIS P1 TSL 5 BASIC4.06□□□□□ -1.76
CDH13P55290 LINC01341-201ENST00000419361 552 ntTSL 2 BASIC4.06□□□□□ -1.76
CDH13P55290 MTCO3P1-205ENST00000422088 832 ntBASIC4.06□□□□□ -1.76
CDH13P55290 GTF2IP23-201ENST00000423746 351 ntBASIC4.06□□□□□ -1.76
CDH13P55290 RPL31P54-201ENST00000429803 370 ntBASIC4.06□□□□□ -1.76
CDH13P55290 VDAC1P6-201ENST00000430062 855 ntBASIC4.06□□□□□ -1.76
CDH13P55290 RPS29P17-201ENST00000430795 166 ntBASIC4.06□□□□□ -1.76
CDH13P55290 AP000855.1-201ENST00000433210 636 ntTSL 2 BASIC4.06□□□□□ -1.76
CDH13P55290 LIX1L-AS1-204ENST00000437207 222 ntTSL 5 BASIC4.06□□□□□ -1.76
CDH13P55290 RPL23AP16-201ENST00000441715 421 ntBASIC4.06□□□□□ -1.76
CDH13P55290 RPL29P29-201ENST00000448725 423 ntBASIC4.06□□□□□ -1.76
CDH13P55290 AC010235.1-201ENST00000450613 547 ntTSL 3 BASIC4.06□□□□□ -1.76
CDH13P55290 AL512328.1-202ENST00000452640 850 ntTSL 3 BASIC4.06□□□□□ -1.76
CDH13P55290 LINC01878-202ENST00000453965 405 ntTSL 3 BASIC4.06□□□□□ -1.76
CDH13P55290 AL157400.4-201ENST00000455699 667 ntTSL 1 (best) BASIC4.06□□□□□ -1.76
CDH13P55290 AC109327.1-201ENST00000471666 403 ntBASIC4.06□□□□□ -1.76
CDH13P55290 AC010301.1-201ENST00000473936 355 ntBASIC4.06□□□□□ -1.76
CDH13P55290 AF213884.1-201ENST00000488102 463 ntBASIC4.06□□□□□ -1.76
CDH13P55290 LINC02049-201ENST00000490647 747 ntTSL 1 (best) BASIC4.06□□□□□ -1.76
CDH13P55290 RN7SL691P-201ENST00000494487 301 ntBASIC4.06□□□□□ -1.76
CDH13P55290 AC111000.4-201ENST00000504301 569 ntTSL 5 BASIC4.06□□□□□ -1.76
CDH13P55290 AC093864.1-201ENST00000504555 745 ntTSL 5 BASIC4.06□□□□□ -1.76
CDH13P55290 AC020699.1-201ENST00000505161 445 ntBASIC4.06□□□□□ -1.76
CDH13P55290 LINC02118-201ENST00000505899 407 ntTSL 3 BASIC4.06□□□□□ -1.76
CDH13P55290 AC098587.1-201ENST00000508241 540 ntTSL 4 BASIC4.06□□□□□ -1.76
CDH13P55290 AC016598.2-201ENST00000514942 525 ntTSL 5 BASIC4.06□□□□□ -1.76
CDH13P55290 RNU6-1225P-201ENST00000516336 65 ntBASIC4.06□□□□□ -1.76
CDH13P55290 AC100871.2-201ENST00000522005 327 ntTSL 3 BASIC4.06□□□□□ -1.76
CDH13P55290 AL353699.1-201ENST00000529078 365 ntTSL 3 BASIC4.06□□□□□ -1.76
CDH13P55290 RRAS2-205ENST00000529237 1278 ntTSL 2 BASIC4.06□□□□□ -1.76
CDH13P55290 DEFB109D-201ENST00000529497 240 ntBASIC4.06□□□□□ -1.76
CDH13P55290 AC089983.1-201ENST00000549807 701 ntTSL 3 BASIC4.06□□□□□ -1.76
CDH13P55290 MTND1P24-201ENST00000552175 861 ntBASIC4.06□□□□□ -1.76
CDH13P55290 FAM96A-206ENST00000559950 561 ntTSL 2 BASIC4.06□□□□□ -1.76
Retrieved 100 of 98,524 protein–RNA pairs in 79.7 ms