Protein–RNA interactions for Protein: P31277

HOXD11, Homeobox protein Hox-D11, humanhuman

Predicted RBP Predictions only

Length 338 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXD11P31277 AL158835.2-201ENST00000430970 300 ntTSL 2 BASIC8.4□□□□□ -1.06
HOXD11P31277 RPS10P14-201ENST00000440748 502 ntBASIC8.4□□□□□ -1.06
HOXD11P31277 SNRPGP7-201ENST00000469016 106 ntBASIC8.4□□□□□ -1.06
HOXD11P31277 RN7SL267P-201ENST00000485107 261 ntBASIC8.4□□□□□ -1.06
HOXD11P31277 RN7SL214P-201ENST00000487317 265 ntBASIC8.4□□□□□ -1.06
HOXD11P31277 AC079098.1-202ENST00000523150 573 ntTSL 5 BASIC8.4□□□□□ -1.06
HOXD11P31277 AC130365.2-201ENST00000525882 1201 ntBASIC8.4□□□□□ -1.06
HOXD11P31277 AP004833.3-201ENST00000531893 322 ntBASIC8.4□□□□□ -1.06
HOXD11P31277 C16orf62-224ENST00000567245 573 ntTSL 5 BASIC8.4□□□□□ -1.06
HOXD11P31277 AC126773.1-201ENST00000569654 547 ntTSL 4 BASIC8.4□□□□□ -1.06
HOXD11P31277 IGLL4P-201ENST00000614590 133 ntBASIC8.4□□□□□ -1.06
HOXD11P31277 VANGL1-204ENST00000369510 8647 ntAPPRIS ALT1 TSL 1 (best) BASIC8.4□□□□□ -1.06
HOXD11P31277 PHF2P2-202ENST00000444553 2865 ntBASIC8.4□□□□□ -1.06
HOXD11P31277 CPA4-201ENST00000222482 2797 ntAPPRIS P1 TSL 1 (best) BASIC8.4□□□□□ -1.06
HOXD11P31277 DCAF5-208ENST00000556847 2791 ntTSL 5 BASIC8.4□□□□□ -1.06
HOXD11P31277 STXBP5-201ENST00000321680 3456 ntAPPRIS ALT1 TSL 5 BASIC8.4□□□□□ -1.06
HOXD11P31277 L3MBTL3-202ENST00000368136 4235 ntAPPRIS P4 TSL 5 BASIC8.4□□□□□ -1.06
HOXD11P31277 ERCC6-208ENST00000515869 3439 ntTSL 2 BASIC8.4□□□□□ -1.07
HOXD11P31277 RAB3GAP1-201ENST00000264158 4914 ntAPPRIS P1 TSL 1 (best) BASIC8.4□□□□□ -1.07
HOXD11P31277 MARF1-202ENST00000540441 7105 ntTSL 5 BASIC8.4□□□□□ -1.07
HOXD11P31277 ZNF345-213ENST00000589046 3120 ntAPPRIS P1 TSL 1 (best) BASIC8.4□□□□□ -1.07
HOXD11P31277 ZNF345-215ENST00000614069 3103 ntAPPRIS P1 TSL 3 BASIC8.4□□□□□ -1.07
HOXD11P31277 LINC00347-202ENST00000594461 2371 ntTSL 1 (best) BASIC8.4□□□□□ -1.07
HOXD11P31277 PNMA8C-201ENST00000617053 4255 ntAPPRIS P1 BASIC8.4□□□□□ -1.07
HOXD11P31277 CD200R1-202ENST00000308611 2299 ntAPPRIS P4 TSL 1 (best) BASIC8.4□□□□□ -1.07
HOXD11P31277 DPF3-216ENST00000614862 4221 ntTSL 5 BASIC8.4□□□□□ -1.07
HOXD11P31277 C2CD5-206ENST00000536386 3496 ntTSL 1 (best) BASIC8.39□□□□□ -1.07
HOXD11P31277 ATF1-201ENST00000262053 2181 ntAPPRIS P1 TSL 1 (best) BASIC8.39□□□□□ -1.07
HOXD11P31277 PLCH1-204ENST00000460012 6413 ntAPPRIS P3 TSL 5 BASIC8.39□□□□□ -1.07
HOXD11P31277 TBCK-201ENST00000273980 8101 ntAPPRIS P1 TSL 5 BASIC8.39□□□□□ -1.07
HOXD11P31277 KIAA1217-201ENST00000307544 3281 ntTSL 1 (best) BASIC8.39□□□□□ -1.07
HOXD11P31277 LINC01132-201ENST00000437601 3793 ntTSL 4 BASIC8.39□□□□□ -1.07
HOXD11P31277 C15orf53-201ENST00000318792 2043 ntAPPRIS P1 TSL 1 (best) BASIC8.39□□□□□ -1.07
HOXD11P31277 ZNF571-202ENST00000358744 2049 ntAPPRIS P1 TSL 2 BASIC8.39□□□□□ -1.07
HOXD11P31277 ABLIM3-201ENST00000309868 4326 ntAPPRIS P1 TSL 1 (best) BASIC8.39□□□□□ -1.07
HOXD11P31277 MYH15-201ENST00000273353 7074 ntAPPRIS P1 TSL 1 (best) BASIC8.39□□□□□ -1.07
HOXD11P31277 WNT2B-203ENST00000369686 10879 ntTSL 1 (best) BASIC8.39□□□□□ -1.07
HOXD11P31277 BCL2L14-213ENST00000589718 1850 ntAPPRIS P1 TSL 5 BASIC8.39□□□□□ -1.07
HOXD11P31277 ABHD4-203ENST00000428304 3366 ntAPPRIS P1 TSL 1 (best) BASIC8.39□□□□□ -1.07
HOXD11P31277 ATP7B-215ENST00000634844 4398 ntAPPRIS ALT2 TSL 1 (best) BASIC8.39□□□□□ -1.07
HOXD11P31277 TMEM43-201ENST00000306077 3341 ntAPPRIS P1 TSL 1 (best) BASIC8.39□□□□□ -1.07
HOXD11P31277 SNORD32A-201ENST00000364805 84 ntBASIC8.39□□□□□ -1.07
HOXD11P31277 RNU6-1276P-201ENST00000365372 104 ntBASIC8.39□□□□□ -1.07
HOXD11P31277 AL354868.1-201ENST00000417077 482 ntBASIC8.39□□□□□ -1.07
HOXD11P31277 RPL23AP95-201ENST00000426806 265 ntBASIC8.39□□□□□ -1.07
HOXD11P31277 AL158212.1-201ENST00000428766 315 ntTSL 5 BASIC8.39□□□□□ -1.07
HOXD11P31277 ACTP1-201ENST00000440793 383 ntBASIC8.39□□□□□ -1.07
HOXD11P31277 ATP5EP1-201ENST00000510257 156 ntBASIC8.39□□□□□ -1.07
HOXD11P31277 RNU6-197P-201ENST00000516680 100 ntBASIC8.39□□□□□ -1.07
HOXD11P31277 AP003032.1-201ENST00000526730 277 ntTSL 3 BASIC8.39□□□□□ -1.07
HOXD11P31277 AC103794.1-201ENST00000531763 197 ntTSL 3 BASIC8.39□□□□□ -1.07
HOXD11P31277 AC019288.1-201ENST00000557918 224 ntBASIC8.39□□□□□ -1.07
HOXD11P31277 AC087565.1-201ENST00000565061 391 ntTSL 5 BASIC8.39□□□□□ -1.07
HOXD11P31277 SSX9-202ENST00000608568 580 ntTSL 4 BASIC8.39□□□□□ -1.07
HOXD11P31277 MIR4662A-201ENST00000637499 67 ntBASIC8.39□□□□□ -1.07
HOXD11P31277 CCNYL2-203ENST00000638057 730 ntTSL 3 BASIC8.39□□□□□ -1.07
HOXD11P31277 MOV10L1-205ENST00000395858 3763 ntAPPRIS ALT2 TSL 1 (best) BASIC8.39□□□□□ -1.07
HOXD11P31277 CXCR6-202ENST00000438735 2242 ntAPPRIS P1 TSL 3 BASIC8.39□□□□□ -1.07
HOXD11P31277 LIMCH1-218ENST00000513024 5129 ntTSL 1 (best) BASIC8.39□□□□□ -1.07
HOXD11P31277 LINC00269-201ENST00000399711 2173 ntTSL 2 BASIC8.39□□□□□ -1.07
HOXD11P31277 RBM46-202ENST00000510397 3626 ntTSL 2 BASIC8.39□□□□□ -1.07
HOXD11P31277 AC087257.1-201ENST00000506925 2639 ntTSL 4 BASIC8.39□□□□□ -1.07
HOXD11P31277 ZNF718-201ENST00000510175 3495 ntAPPRIS P1 TSL 1 (best) BASIC8.39□□□□□ -1.07
HOXD11P31277 ARMC8-215ENST00000471453 2910 ntTSL 2 BASIC8.39□□□□□ -1.07
HOXD11P31277 MKL2-209ENST00000574045 3309 ntAPPRIS P3 TSL 1 (best) BASIC8.39□□□□□ -1.07
HOXD11P31277 PKN2-202ENST00000370513 2890 ntTSL 1 (best) BASIC8.39□□□□□ -1.07
HOXD11P31277 DLG2-218ENST00000524982 2872 ntTSL 2 BASIC8.39□□□□□ -1.07
HOXD11P31277 PHF21A-201ENST00000323180 3675 ntTSL 1 (best) BASIC8.39□□□□□ -1.07
HOXD11P31277 RIMS1-206ENST00000425662 2799 ntTSL 1 (best) BASIC8.39□□□□□ -1.07
HOXD11P31277 FBXL2-222ENST00000538892 2793 ntTSL 5 BASIC8.39□□□□□ -1.07
HOXD11P31277 PROM1-210ENST00000510224 4006 ntAPPRIS P3 TSL 5 BASIC8.38□□□□□ -1.07
HOXD11P31277 STRADA-226ENST00000638276 1865 ntTSL 5 BASIC8.38□□□□□ -1.07
HOXD11P31277 IQCG-201ENST00000265239 2262 ntAPPRIS P1 TSL 1 (best) BASIC8.38□□□□□ -1.07
HOXD11P31277 PAPPA2-202ENST00000367662 9691 ntAPPRIS P1 TSL 1 (best) BASIC8.38□□□□□ -1.07
HOXD11P31277 MAT2B-201ENST00000280969 2226 ntTSL 1 (best) BASIC8.38□□□□□ -1.07
HOXD11P31277 AC016745.2-201ENST00000608834 3443 ntBASIC8.38□□□□□ -1.07
HOXD11P31277 SYNE3-205ENST00000557275 13488 ntAPPRIS ALT1 TSL 2 BASIC8.38□□□□□ -1.07
HOXD11P31277 OSBPL11-201ENST00000296220 4191 ntAPPRIS P1 TSL 1 (best) BASIC8.38□□□□□ -1.07
HOXD11P31277 SIPA1L1-203ENST00000537413 4129 ntTSL 2 BASIC8.38□□□□□ -1.07
HOXD11P31277 AGBL4-204ENST00000371839 2947 ntAPPRIS P2 TSL 2 BASIC8.38□□□□□ -1.07
HOXD11P31277 OAS2-207ENST00000620097 2908 ntAPPRIS ALT2 TSL 5 BASIC8.38□□□□□ -1.07
HOXD11P31277 FCHSD2-201ENST00000311172 4340 ntTSL 1 (best) BASIC8.38□□□□□ -1.07
HOXD11P31277 CTNND1-215ENST00000526938 3489 ntTSL 5 BASIC8.38□□□□□ -1.07
HOXD11P31277 AL391704.1-201ENST00000422206 2368 ntTSL 1 (best) BASIC8.38□□□□□ -1.07
HOXD11P31277 RNU6-727P-201ENST00000363592 107 ntBASIC8.38□□□□□ -1.07
HOXD11P31277 RNU6-882P-201ENST00000391025 103 ntBASIC8.38□□□□□ -1.07
HOXD11P31277 RPS20P14-201ENST00000412545 360 ntBASIC8.38□□□□□ -1.07
HOXD11P31277 VWC2L-IT1-201ENST00000416430 467 ntTSL 3 BASIC8.38□□□□□ -1.07
HOXD11P31277 AL133387.1-201ENST00000442188 382 ntTSL 3 BASIC8.38□□□□□ -1.07
HOXD11P31277 AC017006.2-201ENST00000444077 464 ntTSL 5 BASIC8.38□□□□□ -1.07
HOXD11P31277 snoU13.6-201ENST00000458785 104 ntBASIC8.38□□□□□ -1.07
HOXD11P31277 AC008620.1-201ENST00000468453 592 ntBASIC8.38□□□□□ -1.07
HOXD11P31277 GNGT2-205ENST00000511673 500 ntAPPRIS P1 TSL 1 (best) BASIC8.38□□□□□ -1.07
HOXD11P31277 SNORA43.2-201ENST00000516652 128 ntBASIC8.38□□□□□ -1.07
HOXD11P31277 RNU1-104P-201ENST00000517280 175 ntBASIC8.38□□□□□ -1.07
HOXD11P31277 FARSA-AS1-201ENST00000592636 241 ntTSL 5 BASIC8.38□□□□□ -1.07
HOXD11P31277 AL133342.1-201ENST00000618168 366 ntTSL 3 BASIC8.38□□□□□ -1.07
HOXD11P31277 AC007347.2-201ENST00000623044 180 ntBASIC8.38□□□□□ -1.07
HOXD11P31277 TRIM55-201ENST00000276573 1960 ntTSL 1 (best) BASIC8.38□□□□□ -1.07
HOXD11P31277 ACSL5-201ENST00000354273 3353 ntAPPRIS P1 TSL 1 (best) BASIC8.38□□□□□ -1.07
Retrieved 100 of 98,524 protein–RNA pairs in 139.2 ms