Protein–RNA interactions for Protein: P05067

APP, Amyloid-beta A4 protein, humanhuman

Predictions only

Length 770 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APPP05067 TFG-209ENST00000615993 1244 ntTSL 1 (best) BASIC5.73□□□□□ -1.49
APPP05067 AC018755.4-201ENST00000619715 454 ntBASIC5.73□□□□□ -1.49
APPP05067 LDHA-225ENST00000625635 141 ntTSL 5 BASIC5.73□□□□□ -1.49
APPP05067 AC109462.4-201ENST00000637882 581 ntTSL 5 BASIC5.73□□□□□ -1.49
APPP05067 AC073869.10-201ENST00000642016 354 ntBASIC5.73□□□□□ -1.49
APPP05067 PARP8-201ENST00000281631 7177 ntAPPRIS P1 TSL 1 (best) BASIC5.73□□□□□ -1.49
APPP05067 SYTL2-213ENST00000525702 2727 ntTSL 1 (best) BASIC5.73□□□□□ -1.49
APPP05067 GABPB1-204ENST00000396464 1401 ntTSL 1 (best) BASIC5.73□□□□□ -1.49
APPP05067 MAPK10-304ENST00000641341 3984 ntBASIC5.72□□□□□ -1.49
APPP05067 OR56A1-203ENST00000641900 8448 ntAPPRIS P1 BASIC5.72□□□□□ -1.49
APPP05067 OR4E2-202ENST00000641524 2855 ntAPPRIS P1 BASIC5.72□□□□□ -1.49
APPP05067 RNA5SP88-201ENST00000365560 109 ntBASIC5.72□□□□□ -1.49
APPP05067 RNA5SP87-201ENST00000384155 118 ntBASIC5.72□□□□□ -1.49
APPP05067 RNU6-1215P-201ENST00000384441 102 ntBASIC5.72□□□□□ -1.49
APPP05067 RNY3P10-201ENST00000384764 102 ntBASIC5.72□□□□□ -1.49
APPP05067 MIR708-201ENST00000390708 88 ntBASIC5.72□□□□□ -1.49
APPP05067 AL078595.1-201ENST00000404458 226 ntBASIC5.72□□□□□ -1.49
APPP05067 CACYBP-203ENST00000406752 243 ntTSL 5 BASIC5.72□□□□□ -1.49
APPP05067 MIR1271-201ENST00000408537 86 ntBASIC5.72□□□□□ -1.49
APPP05067 GLS-204ENST00000409428 816 ntTSL 2 BASIC5.72□□□□□ -1.49
APPP05067 RNU2-16P-201ENST00000410712 136 ntBASIC5.72□□□□□ -1.49
APPP05067 ATG4AP1-201ENST00000416893 538 ntBASIC5.72□□□□□ -1.49
APPP05067 CYCSP10-201ENST00000417973 294 ntBASIC5.72□□□□□ -1.49
APPP05067 AC062016.2-201ENST00000420950 676 ntBASIC5.72□□□□□ -1.49
APPP05067 RGS17P1-201ENST00000423358 553 ntBASIC5.72□□□□□ -1.49
APPP05067 TRAPPC2P5-201ENST00000426293 308 ntBASIC5.72□□□□□ -1.49
APPP05067 LINC01400-201ENST00000426358 947 ntTSL 3 BASIC5.72□□□□□ -1.49
APPP05067 MTND1P4-201ENST00000435196 415 ntBASIC5.72□□□□□ -1.49
APPP05067 AC018742.1-201ENST00000435237 488 ntTSL 3 BASIC5.72□□□□□ -1.49
APPP05067 LINC00353-201ENST00000435401 685 ntTSL 5 BASIC5.72□□□□□ -1.49
APPP05067 MTND1P28-201ENST00000435623 950 ntBASIC5.72□□□□□ -1.49
APPP05067 AL512286.1-201ENST00000439244 400 ntBASIC5.72□□□□□ -1.49
APPP05067 AC074327.1-202ENST00000443523 369 ntTSL 2 BASIC5.72□□□□□ -1.49
APPP05067 AC074327.1-201ENST00000448017 540 ntTSL 2 BASIC5.72□□□□□ -1.49
APPP05067 TMEM246-AS1-204ENST00000450109 538 ntTSL 3 BASIC5.72□□□□□ -1.49
APPP05067 SLC31A1P1-201ENST00000451221 567 ntBASIC5.72□□□□□ -1.49
APPP05067 RPL5P32-201ENST00000454085 879 ntBASIC5.72□□□□□ -1.49
APPP05067 OR9M1P-201ENST00000459641 921 ntBASIC5.72□□□□□ -1.49
APPP05067 SRRM1P2-201ENST00000464531 1192 ntBASIC5.72□□□□□ -1.49
APPP05067 AC104763.1-201ENST00000475274 360 ntBASIC5.72□□□□□ -1.49
APPP05067 CREM-238ENST00000488741 651 ntTSL 2 BASIC5.72□□□□□ -1.49
APPP05067 RPS23P1-201ENST00000491662 432 ntBASIC5.72□□□□□ -1.49
APPP05067 MTATP6P22-201ENST00000507369 598 ntBASIC5.72□□□□□ -1.49
APPP05067 LINC02100-201ENST00000512978 238 ntTSL 3 BASIC5.72□□□□□ -1.49
APPP05067 TRAPPC2-208ENST00000519885 561 ntTSL 3 BASIC5.72□□□□□ -1.49
APPP05067 RGS4-207ENST00000527809 817 ntTSL 4 BASIC5.72□□□□□ -1.49
APPP05067 A2ML1-AS1-201ENST00000537288 452 ntTSL 3 BASIC5.72□□□□□ -1.49
APPP05067 AC090502.2-201ENST00000549267 280 ntBASIC5.72□□□□□ -1.49
APPP05067 AC074029.1-201ENST00000552531 1044 ntBASIC5.72□□□□□ -1.49
APPP05067 AL450442.1-201ENST00000554042 854 ntTSL 1 (best) BASIC5.72□□□□□ -1.49
APPP05067 TIMM9-208ENST00000556007 746 ntTSL 3 BASIC5.72□□□□□ -1.49
APPP05067 AC087477.6-201ENST00000559595 843 ntBASIC5.72□□□□□ -1.49
APPP05067 HMGB3P26-201ENST00000560051 582 ntBASIC5.72□□□□□ -1.49
APPP05067 AC015660.2-201ENST00000561362 323 ntTSL 3 BASIC5.72□□□□□ -1.49
APPP05067 SULT1C2P2-201ENST00000562517 294 ntBASIC5.72□□□□□ -1.49
APPP05067 RN7SL802P-201ENST00000577858 299 ntBASIC5.72□□□□□ -1.49
APPP05067 MIR5699-201ENST00000578903 90 ntBASIC5.72□□□□□ -1.49
APPP05067 AC107982.3-201ENST00000584957 985 ntBASIC5.72□□□□□ -1.49
APPP05067 AC012065.4-201ENST00000602445 679 ntBASIC5.72□□□□□ -1.49
APPP05067 AL357080.1-201ENST00000617394 239 ntBASIC5.72□□□□□ -1.49
APPP05067 MIR6853-201ENST00000619642 74 ntBASIC5.72□□□□□ -1.49
APPP05067 AC092650.2-201ENST00000619984 902 ntBASIC5.72□□□□□ -1.49
APPP05067 AC008703.1-201ENST00000637629 1174 ntTSL 5 BASIC5.72□□□□□ -1.49
APPP05067 GTPBP8-205ENST00000473129 1518 ntTSL 2 BASIC5.72□□□□□ -1.49
APPP05067 CACNB4-233ENST00000636773 4143 ntTSL 5 BASIC5.72□□□□□ -1.49
APPP05067 AL079343.1-201ENST00000572358 1771 ntBASIC5.72□□□□□ -1.49
APPP05067 ZNF28-204ENST00000457749 4556 ntAPPRIS P1 TSL 1 (best) BASIC5.72□□□□□ -1.49
APPP05067 OR11H4-202ENST00000641082 1585 ntAPPRIS P1 BASIC5.72□□□□□ -1.49
APPP05067 F2RL2-201ENST00000296641 3429 ntAPPRIS P1 TSL 1 (best) BASIC5.71□□□□□ -1.49
APPP05067 AL136164.3-201ENST00000624429 3978 ntBASIC5.71□□□□□ -1.49
APPP05067 MLF1-208ENST00000478894 1372 ntTSL 2 BASIC5.71□□□□□ -1.5
APPP05067 AL442639.1-201ENST00000625030 1899 ntBASIC5.71□□□□□ -1.5
APPP05067 GABRA2-202ENST00000381620 2525 ntAPPRIS P1 TSL 1 (best) BASIC5.71□□□□□ -1.5
APPP05067 AC090017.1-201ENST00000548612 1779 ntBASIC5.71□□□□□ -1.5
APPP05067 DDX20-202ENST00000475700 4332 ntTSL 2 BASIC5.71□□□□□ -1.5
APPP05067 NPVF-201ENST00000222674 1190 ntAPPRIS P1 TSL 1 (best) BASIC5.71□□□□□ -1.5
APPP05067 Y_RNA.25-201ENST00000362528 102 ntBASIC5.71□□□□□ -1.5
APPP05067 RNU6-115P-201ENST00000364310 107 ntBASIC5.71□□□□□ -1.5
APPP05067 CUBN-201ENST00000377823 705 ntTSL 3 BASIC5.71□□□□□ -1.5
APPP05067 RN7SKP100-201ENST00000411258 284 ntBASIC5.71□□□□□ -1.5
APPP05067 RSU1P3-201ENST00000412878 835 ntBASIC5.71□□□□□ -1.5
APPP05067 MTCYBP38-201ENST00000417160 1123 ntBASIC5.71□□□□□ -1.5
APPP05067 EBLN1-201ENST00000422359 1208 ntAPPRIS P1 BASIC5.71□□□□□ -1.5
APPP05067 RPS12P5-201ENST00000423449 371 ntBASIC5.71□□□□□ -1.5
APPP05067 AC005154.2-201ENST00000438110 379 ntBASIC5.71□□□□□ -1.5
APPP05067 AC241584.1-201ENST00000438469 1241 ntBASIC5.71□□□□□ -1.5
APPP05067 DOCK9-AS1-201ENST00000439367 392 ntTSL 3 BASIC5.71□□□□□ -1.5
APPP05067 LINC00484-204ENST00000439438 454 ntTSL 3 BASIC5.71□□□□□ -1.5
APPP05067 AL160271.1-201ENST00000444708 829 ntTSL 3 BASIC5.71□□□□□ -1.5
APPP05067 TRGVB-201ENST00000453257 471 ntBASIC5.71□□□□□ -1.5
APPP05067 CFTRP1-201ENST00000456646 183 ntBASIC5.71□□□□□ -1.5
APPP05067 AC016751.1-201ENST00000458254 306 ntTSL 3 BASIC5.71□□□□□ -1.5
APPP05067 CREM-230ENST00000474931 626 ntTSL 2 BASIC5.71□□□□□ -1.5
APPP05067 AC116337.2-201ENST00000477662 156 ntBASIC5.71□□□□□ -1.5
APPP05067 AC090686.1-201ENST00000481577 749 ntBASIC5.71□□□□□ -1.5
APPP05067 AC090071.1-201ENST00000507713 644 ntBASIC5.71□□□□□ -1.5
APPP05067 MTCO1P30-201ENST00000515244 580 ntBASIC5.71□□□□□ -1.5
APPP05067 RNU1-6P-201ENST00000516290 144 ntBASIC5.71□□□□□ -1.5
APPP05067 AC016885.1-201ENST00000517796 532 ntTSL 4 BASIC5.71□□□□□ -1.5
APPP05067 AC099520.1-208ENST00000518276 472 ntTSL 3 BASIC5.71□□□□□ -1.5
Retrieved 100 of 98,524 protein–RNA pairs in 100.5 ms