Protein–RNA interactions for Protein: Q9Y5P4

COL4A3BP, Collagen type IV alpha-3-binding protein, humanhuman

Predictions only

Length 624 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A3BPQ9Y5P4 AP001021.1-201ENST00000577704 244 ntTSL 3 BASIC5.42□□□□□ -1.54
COL4A3BPQ9Y5P4 AC009704.1-201ENST00000583702 331 ntTSL 5 BASIC5.42□□□□□ -1.54
COL4A3BPQ9Y5P4 SP2-AS1-204ENST00000585280 405 ntTSL 3 BASIC5.42□□□□□ -1.54
COL4A3BPQ9Y5P4 AC006065.5-201ENST00000623427 349 ntBASIC5.42□□□□□ -1.54
COL4A3BPQ9Y5P4 CR381572.2-201ENST00000624852 397 ntBASIC5.42□□□□□ -1.54
COL4A3BPQ9Y5P4 WASF3-AS1-206ENST00000626779 381 ntTSL 5 BASIC5.42□□□□□ -1.54
COL4A3BPQ9Y5P4 MYOT-202ENST00000421631 1474 ntTSL 2 BASIC5.42□□□□□ -1.54
COL4A3BPQ9Y5P4 SP110-202ENST00000258382 2080 ntTSL 1 (best) BASIC5.42□□□□□ -1.54
COL4A3BPQ9Y5P4 RDH10-AS1-201ENST00000514599 3261 ntTSL 2 BASIC5.42□□□□□ -1.54
COL4A3BPQ9Y5P4 USP26-203ENST00000511190 3665 ntAPPRIS P1 TSL 2 BASIC5.42□□□□□ -1.54
COL4A3BPQ9Y5P4 AL356489.2-201ENST00000566968 3528 ntBASIC5.42□□□□□ -1.54
COL4A3BPQ9Y5P4 WDR63-203ENST00000370596 2905 ntAPPRIS ALT2 TSL 5 BASIC5.42□□□□□ -1.54
COL4A3BPQ9Y5P4 ATP2C1-205ENST00000504381 3498 ntTSL 2 BASIC5.42□□□□□ -1.54
COL4A3BPQ9Y5P4 DNAH6-202ENST00000389394 12795 ntAPPRIS P1 TSL 5 BASIC5.42□□□□□ -1.54
COL4A3BPQ9Y5P4 SLC9C1-201ENST00000305815 4172 ntAPPRIS P3 TSL 2 BASIC5.41□□□□□ -1.54
COL4A3BPQ9Y5P4 SLMAP-206ENST00000428312 4132 ntTSL 1 (best) BASIC5.41□□□□□ -1.54
COL4A3BPQ9Y5P4 TTC3-204ENST00000399017 10363 ntAPPRIS P1 TSL 1 (best) BASIC5.41□□□□□ -1.54
COL4A3BPQ9Y5P4 ZBED6-202ENST00000550078 12481 ntAPPRIS P1 TSL 1 (best) BASIC5.41□□□□□ -1.54
COL4A3BPQ9Y5P4 LINC02493-201ENST00000509964 1704 ntTSL 1 (best) BASIC5.41□□□□□ -1.54
COL4A3BPQ9Y5P4 RNU6-761P-201ENST00000384148 107 ntBASIC5.41□□□□□ -1.54
COL4A3BPQ9Y5P4 Y_RNA.493-201ENST00000384422 102 ntBASIC5.41□□□□□ -1.54
COL4A3BPQ9Y5P4 SPRR2A-201ENST00000392653 709 ntAPPRIS P1 TSL 1 (best) BASIC5.41□□□□□ -1.54
COL4A3BPQ9Y5P4 RNA5SP345-201ENST00000410646 108 ntBASIC5.41□□□□□ -1.54
COL4A3BPQ9Y5P4 AC002456.1-203ENST00000412669 449 ntTSL 3 BASIC5.41□□□□□ -1.54
COL4A3BPQ9Y5P4 AL024509.3-201ENST00000413898 745 ntTSL 1 (best) BASIC5.41□□□□□ -1.54
COL4A3BPQ9Y5P4 INTS6L-AS1-201ENST00000430820 398 ntTSL 3 BASIC5.41□□□□□ -1.54
COL4A3BPQ9Y5P4 AL354794.1-201ENST00000442103 516 ntTSL 3 BASIC5.41□□□□□ -1.54
COL4A3BPQ9Y5P4 KATNBL1P3-201ENST00000443475 909 ntBASIC5.41□□□□□ -1.54
COL4A3BPQ9Y5P4 AC114814.3-201ENST00000449362 663 ntTSL 2 BASIC5.41□□□□□ -1.54
COL4A3BPQ9Y5P4 AC010733.1-201ENST00000451515 401 ntBASIC5.41□□□□□ -1.54
COL4A3BPQ9Y5P4 FGF14-AS1-202ENST00000451630 321 ntTSL 2 BASIC5.41□□□□□ -1.54
COL4A3BPQ9Y5P4 AL603839.1-201ENST00000453437 432 ntTSL 2 BASIC5.41□□□□□ -1.54
COL4A3BPQ9Y5P4 ALG13-211ENST00000473389 693 ntTSL 2 BASIC5.41□□□□□ -1.54
COL4A3BPQ9Y5P4 MTND3P7-201ENST00000474435 343 ntBASIC5.41□□□□□ -1.54
COL4A3BPQ9Y5P4 AC007686.1-201ENST00000488511 463 ntBASIC5.41□□□□□ -1.54
COL4A3BPQ9Y5P4 AC093809.1-201ENST00000509155 340 ntBASIC5.41□□□□□ -1.54
COL4A3BPQ9Y5P4 AC024589.1-201ENST00000512207 263 ntBASIC5.41□□□□□ -1.54
COL4A3BPQ9Y5P4 MTND5P4-201ENST00000514978 288 ntBASIC5.41□□□□□ -1.54
COL4A3BPQ9Y5P4 RNU4-60P-201ENST00000517239 135 ntBASIC5.41□□□□□ -1.54
COL4A3BPQ9Y5P4 RAD21-204ENST00000518055 896 ntTSL 2 BASIC5.41□□□□□ -1.54
COL4A3BPQ9Y5P4 NECAB1-205ENST00000522820 811 ntTSL 2 BASIC5.41□□□□□ -1.54
COL4A3BPQ9Y5P4 AL356057.1-201ENST00000533798 831 ntBASIC5.41□□□□□ -1.54
COL4A3BPQ9Y5P4 AC068587.4-201ENST00000533893 186 ntBASIC5.41□□□□□ -1.54
COL4A3BPQ9Y5P4 AC107954.1-201ENST00000565906 727 ntBASIC5.41□□□□□ -1.54
COL4A3BPQ9Y5P4 AC009139.2-201ENST00000569032 566 ntTSL 5 BASIC5.41□□□□□ -1.54
COL4A3BPQ9Y5P4 CYCSP40-201ENST00000575927 294 ntBASIC5.41□□□□□ -1.54
COL4A3BPQ9Y5P4 AC037487.4-201ENST00000577423 625 ntTSL 3 BASIC5.41□□□□□ -1.54
COL4A3BPQ9Y5P4 AC091042.1-201ENST00000579213 173 ntBASIC5.41□□□□□ -1.54
COL4A3BPQ9Y5P4 SNORA74C-1-201ENST00000580726 201 ntBASIC5.41□□□□□ -1.54
COL4A3BPQ9Y5P4 AC011477.2-201ENST00000590697 921 ntTSL 2 BASIC5.41□□□□□ -1.54
COL4A3BPQ9Y5P4 BBIP1P1-201ENST00000602999 279 ntBASIC5.41□□□□□ -1.54
COL4A3BPQ9Y5P4 AL512782.1-201ENST00000603093 364 ntBASIC5.41□□□□□ -1.54
COL4A3BPQ9Y5P4 AL391358.1-201ENST00000605342 190 ntBASIC5.41□□□□□ -1.54
COL4A3BPQ9Y5P4 AC105129.3-201ENST00000605455 485 ntBASIC5.41□□□□□ -1.54
COL4A3BPQ9Y5P4 NAA60-237ENST00000615865 326 ntTSL 5 BASIC5.41□□□□□ -1.54
COL4A3BPQ9Y5P4 AL356596.1-201ENST00000624230 379 ntBASIC5.41□□□□□ -1.54
COL4A3BPQ9Y5P4 PCDH9-203ENST00000456367 5072 ntTSL 1 (best) BASIC5.41□□□□□ -1.54
COL4A3BPQ9Y5P4 CDKL3-209ENST00000523054 1775 ntTSL 2 BASIC5.41□□□□□ -1.54
COL4A3BPQ9Y5P4 RC3H1-202ENST00000367694 3775 ntAPPRIS ALT1 TSL 2 BASIC5.41□□□□□ -1.54
COL4A3BPQ9Y5P4 NABP1-205ENST00000425611 1878 ntAPPRIS P1 TSL 1 (best) BASIC5.41□□□□□ -1.54
COL4A3BPQ9Y5P4 AC021355.1-202ENST00000519996 1633 ntTSL 2 BASIC5.41□□□□□ -1.54
COL4A3BPQ9Y5P4 MROH9-202ENST00000367759 3165 ntAPPRIS ALT2 TSL 5 BASIC5.41□□□□□ -1.54
COL4A3BPQ9Y5P4 XKR3-201ENST00000331428 1690 ntAPPRIS P1 TSL 1 (best) BASIC5.4□□□□□ -1.54
COL4A3BPQ9Y5P4 LMNTD1-204ENST00000458174 1677 ntAPPRIS ALT2 TSL 2 BASIC5.4□□□□□ -1.54
COL4A3BPQ9Y5P4 AL022578.1-201ENST00000439330 1433 ntBASIC5.4□□□□□ -1.54
COL4A3BPQ9Y5P4 ACE2-202ENST00000427411 3507 ntAPPRIS P1 TSL 1 (best) BASIC5.4□□□□□ -1.54
COL4A3BPQ9Y5P4 TCP11X1-203ENST00000623912 1715 ntTSL 5 BASIC5.4□□□□□ -1.54
COL4A3BPQ9Y5P4 PRLR-220ENST00000620785 11063 ntTSL 5 BASIC5.4□□□□□ -1.54
COL4A3BPQ9Y5P4 PCAT14-202ENST00000627127 3935 ntBASIC5.4□□□□□ -1.54
COL4A3BPQ9Y5P4 FAR2-203ENST00000547116 1787 ntTSL 2 BASIC5.4□□□□□ -1.54
COL4A3BPQ9Y5P4 ZKSCAN8-201ENST00000330236 7376 ntAPPRIS P1 TSL 1 (best) BASIC5.4□□□□□ -1.54
COL4A3BPQ9Y5P4 PPP1R9A-207ENST00000433881 9928 ntAPPRIS P1 TSL 5 BASIC5.4□□□□□ -1.54
COL4A3BPQ9Y5P4 OR6B1-202ENST00000641698 5153 ntAPPRIS P1 BASIC5.4□□□□□ -1.54
COL4A3BPQ9Y5P4 LDHAL6CP-202ENST00000550738 3224 ntBASIC5.4□□□□□ -1.54
COL4A3BPQ9Y5P4 RNVU1-6-201ENST00000364688 164 ntBASIC5.4□□□□□ -1.54
COL4A3BPQ9Y5P4 KRTAP3-2-201ENST00000391587 702 ntAPPRIS P1 BASIC5.4□□□□□ -1.54
COL4A3BPQ9Y5P4 MIR320C1-201ENST00000408566 88 ntBASIC5.4□□□□□ -1.54
COL4A3BPQ9Y5P4 AL158834.1-201ENST00000419441 466 ntTSL 5 BASIC5.4□□□□□ -1.54
COL4A3BPQ9Y5P4 PSMA6P3-201ENST00000428242 164 ntBASIC5.4□□□□□ -1.54
COL4A3BPQ9Y5P4 FABP7P2-201ENST00000429946 379 ntBASIC5.4□□□□□ -1.54
COL4A3BPQ9Y5P4 MED14P1-201ENST00000430517 648 ntBASIC5.4□□□□□ -1.54
COL4A3BPQ9Y5P4 TTTY20-201ENST00000434487 259 ntTSL 1 (best) BASIC5.4□□□□□ -1.54
COL4A3BPQ9Y5P4 AC074327.1-202ENST00000443523 369 ntTSL 2 BASIC5.4□□□□□ -1.54
COL4A3BPQ9Y5P4 OR1H1P-201ENST00000448731 937 ntBASIC5.4□□□□□ -1.54
COL4A3BPQ9Y5P4 OR6C5P-201ENST00000452388 923 ntBASIC5.4□□□□□ -1.54
COL4A3BPQ9Y5P4 AC093422.2-201ENST00000452599 686 ntTSL 2 BASIC5.4□□□□□ -1.54
COL4A3BPQ9Y5P4 AC104563.1-201ENST00000476147 376 ntBASIC5.4□□□□□ -1.54
COL4A3BPQ9Y5P4 AC108145.1-201ENST00000503770 153 ntBASIC5.4□□□□□ -1.54
COL4A3BPQ9Y5P4 AC093297.2-207ENST00000505401 692 ntTSL 3 BASIC5.4□□□□□ -1.54
COL4A3BPQ9Y5P4 ADGRL3-AS1-204ENST00000509461 481 ntTSL 5 BASIC5.4□□□□□ -1.54
COL4A3BPQ9Y5P4 AF117829.1-202ENST00000524166 836 ntTSL 3 BASIC5.4□□□□□ -1.54
COL4A3BPQ9Y5P4 SNHG1-218ENST00000541615 748 ntTSL 5 BASIC5.4□□□□□ -1.54
COL4A3BPQ9Y5P4 AC130415.1-201ENST00000547569 1010 ntTSL 4 BASIC5.4□□□□□ -1.54
COL4A3BPQ9Y5P4 AC123905.1-201ENST00000552098 541 ntTSL 4 BASIC5.4□□□□□ -1.54
COL4A3BPQ9Y5P4 NOVA1-AS1-203ENST00000552101 468 ntTSL 3 BASIC5.4□□□□□ -1.54
COL4A3BPQ9Y5P4 LINC00640-203ENST00000556479 576 ntTSL 2 BASIC5.4□□□□□ -1.54
COL4A3BPQ9Y5P4 AC004943.1-202ENST00000558618 503 ntTSL 3 BASIC5.4□□□□□ -1.54
COL4A3BPQ9Y5P4 MIR4270-201ENST00000581799 70 ntBASIC5.4□□□□□ -1.54
COL4A3BPQ9Y5P4 MIR4472-2-201ENST00000582069 67 ntBASIC5.4□□□□□ -1.54
COL4A3BPQ9Y5P4 AC090409.2-202ENST00000585706 604 ntTSL 5 BASIC5.4□□□□□ -1.54
Retrieved 100 of 98,524 protein–RNA pairs in 76 ms