Protein–RNA interactions for Protein: Q9Y4P1

ATG4B, Cysteine protease ATG4B, humanhuman

Predictions only

Length 393 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4BQ9Y4P1 MIR1251-201ENST00000408552 70 ntBASIC3.78□□□□□ -1.8
ATG4BQ9Y4P1 OR51A3P-201ENST00000413596 924 ntBASIC3.78□□□□□ -1.8
ATG4BQ9Y4P1 TAF13P2-201ENST00000416876 286 ntBASIC3.78□□□□□ -1.8
ATG4BQ9Y4P1 AC108681.1-202ENST00000417384 589 ntTSL 4 BASIC3.78□□□□□ -1.8
ATG4BQ9Y4P1 AC008280.1-201ENST00000418851 412 ntBASIC3.78□□□□□ -1.8
ATG4BQ9Y4P1 AL117339.2-201ENST00000430475 180 ntBASIC3.78□□□□□ -1.8
ATG4BQ9Y4P1 TBCAP1-201ENST00000436520 327 ntBASIC3.78□□□□□ -1.8
ATG4BQ9Y4P1 AL451129.1-201ENST00000437471 285 ntTSL 3 BASIC3.78□□□□□ -1.8
ATG4BQ9Y4P1 TPTE2P3-201ENST00000441562 1189 ntBASIC3.78□□□□□ -1.8
ATG4BQ9Y4P1 AL592437.1-201ENST00000443781 492 ntBASIC3.78□□□□□ -1.8
ATG4BQ9Y4P1 CASP12-207ENST00000447913 819 ntTSL 1 (best) BASIC3.78□□□□□ -1.8
ATG4BQ9Y4P1 AL121718.1-201ENST00000449463 387 ntTSL 3 BASIC3.78□□□□□ -1.8
ATG4BQ9Y4P1 AC104781.1-201ENST00000449838 397 ntTSL 3 BASIC3.78□□□□□ -1.8
ATG4BQ9Y4P1 AL157359.1-201ENST00000449840 424 ntTSL 3 BASIC3.78□□□□□ -1.8
ATG4BQ9Y4P1 BX276092.4-201ENST00000452056 248 ntBASIC3.78□□□□□ -1.8
ATG4BQ9Y4P1 AC009158.1-205ENST00000452511 895 ntTSL 3 BASIC3.78□□□□□ -1.8
ATG4BQ9Y4P1 RPL5P32-201ENST00000454085 879 ntBASIC3.78□□□□□ -1.8
ATG4BQ9Y4P1 IGKV2D-30-201ENST00000474213 395 ntAPPRIS P1 BASIC3.78□□□□□ -1.8
ATG4BQ9Y4P1 AC106872.2-201ENST00000494303 480 ntBASIC3.78□□□□□ -1.8
ATG4BQ9Y4P1 EPGN-204ENST00000502358 312 ntTSL 1 (best) BASIC3.78□□□□□ -1.8
ATG4BQ9Y4P1 EPGN-206ENST00000503098 339 ntTSL 1 (best) BASIC3.78□□□□□ -1.8
ATG4BQ9Y4P1 EPGN-207ENST00000505212 285 ntTSL 1 (best) BASIC3.78□□□□□ -1.8
ATG4BQ9Y4P1 AC112198.3-201ENST00000505950 441 ntTSL 3 BASIC3.78□□□□□ -1.8
ATG4BQ9Y4P1 ADGRL3-AS1-203ENST00000506704 606 ntTSL 5 BASIC3.78□□□□□ -1.8
ATG4BQ9Y4P1 AC087241.1-201ENST00000508615 429 ntTSL 5 BASIC3.78□□□□□ -1.8
ATG4BQ9Y4P1 AC093248.1-201ENST00000513197 417 ntTSL 2 BASIC3.78□□□□□ -1.8
ATG4BQ9Y4P1 EPGN-209ENST00000514968 312 ntTSL 1 (best) BASIC3.78□□□□□ -1.8
ATG4BQ9Y4P1 HNRNPKP5-201ENST00000515300 253 ntBASIC3.78□□□□□ -1.8
ATG4BQ9Y4P1 CHCHD7-209ENST00000519367 442 ntTSL 3 BASIC3.78□□□□□ -1.8
ATG4BQ9Y4P1 RGS5-218ENST00000526176 574 ntTSL 4 BASIC3.78□□□□□ -1.8
ATG4BQ9Y4P1 AP001999.2-201ENST00000529417 389 ntTSL 3 BASIC3.78□□□□□ -1.8
ATG4BQ9Y4P1 OR8K4P-201ENST00000534608 872 ntBASIC3.78□□□□□ -1.8
ATG4BQ9Y4P1 AC023796.1-201ENST00000536131 670 ntTSL 3 BASIC3.78□□□□□ -1.8
ATG4BQ9Y4P1 AC006518.2-201ENST00000542513 940 ntBASIC3.78□□□□□ -1.8
ATG4BQ9Y4P1 OR8R1P-201ENST00000543943 764 ntBASIC3.78□□□□□ -1.8
ATG4BQ9Y4P1 GNRHR2P1-201ENST00000555315 631 ntBASIC3.78□□□□□ -1.8
ATG4BQ9Y4P1 SRP54-AS1-203ENST00000556355 603 ntTSL 5 BASIC3.78□□□□□ -1.8
ATG4BQ9Y4P1 BNIP3P5-201ENST00000562290 498 ntBASIC3.78□□□□□ -1.8
ATG4BQ9Y4P1 TTN-AS1-228ENST00000589234 751 ntTSL 5 BASIC3.78□□□□□ -1.8
ATG4BQ9Y4P1 ZNF616-203ENST00000597013 577 ntTSL 4 BASIC3.78□□□□□ -1.8
ATG4BQ9Y4P1 AC097717.1-211ENST00000600604 687 ntTSL 5 BASIC3.78□□□□□ -1.8
ATG4BQ9Y4P1 AL353811.1-201ENST00000602851 736 ntTSL 5 BASIC3.78□□□□□ -1.8
ATG4BQ9Y4P1 AC009948.4-201ENST00000604692 675 ntBASIC3.78□□□□□ -1.8
ATG4BQ9Y4P1 AC013468.1-201ENST00000608680 598 ntBASIC3.78□□□□□ -1.8
ATG4BQ9Y4P1 AC124016.2-201ENST00000610058 665 ntBASIC3.78□□□□□ -1.8
ATG4BQ9Y4P1 AC024941.1-201ENST00000612250 334 ntBASIC3.78□□□□□ -1.8
ATG4BQ9Y4P1 AC004825.2-201ENST00000616634 455 ntBASIC3.78□□□□□ -1.8
ATG4BQ9Y4P1 AC103858.2-201ENST00000621471 543 ntBASIC3.78□□□□□ -1.8
ATG4BQ9Y4P1 AC124312.6-202ENST00000623624 418 ntBASIC3.78□□□□□ -1.8
ATG4BQ9Y4P1 AC010872.1-201ENST00000624225 675 ntBASIC3.78□□□□□ -1.8
ATG4BQ9Y4P1 AC126544.2-201ENST00000625174 749 ntBASIC3.78□□□□□ -1.8
ATG4BQ9Y4P1 LRRTM4-201ENST00000409088 3616 ntTSL 1 (best) BASIC3.77□□□□□ -1.81
ATG4BQ9Y4P1 XIRP2-204ENST00000409273 12269 ntTSL 1 (best) BASIC3.77□□□□□ -1.81
ATG4BQ9Y4P1 UBE4A-201ENST00000252108 6103 ntAPPRIS ALT1 TSL 1 (best) BASIC3.77□□□□□ -1.81
ATG4BQ9Y4P1 CENPF-201ENST00000366955 10307 ntAPPRIS P1 TSL 1 (best) BASIC3.77□□□□□ -1.81
ATG4BQ9Y4P1 RNF38-201ENST00000259605 5012 ntTSL 1 (best) BASIC3.77□□□□□ -1.81
ATG4BQ9Y4P1 Y_RNA.126-201ENST00000363382 111 ntBASIC3.77□□□□□ -1.81
ATG4BQ9Y4P1 RN7SKP44-201ENST00000363602 316 ntBASIC3.77□□□□□ -1.81
ATG4BQ9Y4P1 RNA5SP399-201ENST00000364003 117 ntBASIC3.77□□□□□ -1.81
ATG4BQ9Y4P1 PPIAP31-201ENST00000405422 495 ntBASIC3.77□□□□□ -1.81
ATG4BQ9Y4P1 RNU6-628P-201ENST00000410675 107 ntBASIC3.77□□□□□ -1.81
ATG4BQ9Y4P1 RNU4-6P-201ENST00000410804 122 ntBASIC3.77□□□□□ -1.81
ATG4BQ9Y4P1 AC096533.1-201ENST00000411645 353 ntBASIC3.77□□□□□ -1.81
ATG4BQ9Y4P1 AC092638.1-201ENST00000411966 1275 ntBASIC3.77□□□□□ -1.81
ATG4BQ9Y4P1 RPS3AP9-201ENST00000417027 792 ntBASIC3.77□□□□□ -1.81
ATG4BQ9Y4P1 AC007557.4-201ENST00000421907 430 ntTSL 1 (best) BASIC3.77□□□□□ -1.81
ATG4BQ9Y4P1 AC106053.1-201ENST00000431697 368 ntTSL 3 BASIC3.77□□□□□ -1.81
ATG4BQ9Y4P1 RPS6P12-201ENST00000432491 726 ntBASIC3.77□□□□□ -1.81
ATG4BQ9Y4P1 AC024597.1-201ENST00000442753 706 ntTSL 5 BASIC3.77□□□□□ -1.81
ATG4BQ9Y4P1 HMGN3P1-201ENST00000453847 193 ntBASIC3.77□□□□□ -1.81
ATG4BQ9Y4P1 RNU7-140P-201ENST00000459546 60 ntBASIC3.77□□□□□ -1.81
ATG4BQ9Y4P1 CNOT10-AS1-201ENST00000475395 466 ntTSL 3 BASIC3.77□□□□□ -1.81
ATG4BQ9Y4P1 HMGB1P38-201ENST00000490557 577 ntBASIC3.77□□□□□ -1.81
ATG4BQ9Y4P1 LINC02479-201ENST00000508942 630 ntTSL 3 BASIC3.77□□□□□ -1.81
ATG4BQ9Y4P1 TMEM248P1-201ENST00000510579 951 ntBASIC3.77□□□□□ -1.81
ATG4BQ9Y4P1 WWC2-AS1-201ENST00000511846 404 ntTSL 1 (best) BASIC3.77□□□□□ -1.81
ATG4BQ9Y4P1 AC107463.1-202ENST00000514526 689 ntTSL 2 BASIC3.77□□□□□ -1.81
ATG4BQ9Y4P1 RNU4-60P-201ENST00000517239 135 ntBASIC3.77□□□□□ -1.81
ATG4BQ9Y4P1 THEM7P-202ENST00000525689 764 ntTSL 3 BASIC3.77□□□□□ -1.81
ATG4BQ9Y4P1 AC073655.2-202ENST00000547927 401 ntTSL 3 BASIC3.77□□□□□ -1.81
ATG4BQ9Y4P1 AC091516.1-201ENST00000549191 703 ntBASIC3.77□□□□□ -1.81
ATG4BQ9Y4P1 AC090680.2-201ENST00000550279 742 ntTSL 3 BASIC3.77□□□□□ -1.81
ATG4BQ9Y4P1 AC107016.1-201ENST00000550463 337 ntBASIC3.77□□□□□ -1.81
ATG4BQ9Y4P1 AL355096.1-201ENST00000553561 447 ntTSL 3 BASIC3.77□□□□□ -1.81
ATG4BQ9Y4P1 AC068397.1-201ENST00000560337 531 ntTSL 2 BASIC3.77□□□□□ -1.81
ATG4BQ9Y4P1 NIFKP8-201ENST00000560500 874 ntBASIC3.77□□□□□ -1.81
ATG4BQ9Y4P1 AC026462.4-202ENST00000564331 532 ntTSL 3 BASIC3.77□□□□□ -1.81
ATG4BQ9Y4P1 MTCYBP28-201ENST00000566728 1132 ntBASIC3.77□□□□□ -1.81
ATG4BQ9Y4P1 AC022069.1-201ENST00000582910 658 ntBASIC3.77□□□□□ -1.81
ATG4BQ9Y4P1 AL020997.2-201ENST00000602607 184 ntBASIC3.77□□□□□ -1.81
ATG4BQ9Y4P1 AC112503.1-201ENST00000608436 391 ntBASIC3.77□□□□□ -1.81
ATG4BQ9Y4P1 AC128687.2-201ENST00000609657 566 ntBASIC3.77□□□□□ -1.81
ATG4BQ9Y4P1 AC135584.1-201ENST00000624438 333 ntTSL 5 BASIC3.77□□□□□ -1.81
ATG4BQ9Y4P1 AL121594.5-201ENST00000631724 573 ntBASIC3.77□□□□□ -1.81
ATG4BQ9Y4P1 AC068620.4-201ENST00000636730 1182 ntBASIC3.77□□□□□ -1.81
ATG4BQ9Y4P1 AC139713.2-210ENST00000641741 992 ntBASIC3.77□□□□□ -1.81
ATG4BQ9Y4P1 TM4SF18-201ENST00000296059 3852 ntAPPRIS P1 TSL 1 (best) BASIC3.77□□□□□ -1.81
ATG4BQ9Y4P1 AC024940.1-206ENST00000632817 4299 ntAPPRIS P5 TSL 5 BASIC3.77□□□□□ -1.81
ATG4BQ9Y4P1 TTC21B-AS1-201ENST00000440322 2260 ntTSL 4 BASIC3.77□□□□□ -1.81
ATG4BQ9Y4P1 LGI1-210ENST00000629035 2251 ntTSL 5 BASIC3.77□□□□□ -1.81
Retrieved 100 of 98,524 protein–RNA pairs in 81.8 ms