Protein–RNA interactions for Protein: Q99732

LITAF, Lipopolysaccharide-induced tumor necrosis factor-alpha factor, humanhuman

Predictions only

Length 161 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LITAFQ99732 AC068599.1-201ENST00000422558 567 ntTSL 4 BASIC3.3□□□□□ -1.88
LITAFQ99732 EI24P4-201ENST00000423683 1078 ntBASIC3.3□□□□□ -1.88
LITAFQ99732 AC007742.1-201ENST00000425789 329 ntBASIC3.3□□□□□ -1.88
LITAFQ99732 AL449043.1-202ENST00000427318 582 ntTSL 1 (best) BASIC3.3□□□□□ -1.88
LITAFQ99732 VTCN1-204ENST00000430871 569 ntTSL 5 BASIC3.3□□□□□ -1.88
LITAFQ99732 BX323845.1-201ENST00000432417 179 ntBASIC3.3□□□□□ -1.88
LITAFQ99732 AL359636.1-201ENST00000433572 522 ntTSL 3 BASIC3.3□□□□□ -1.88
LITAFQ99732 ELOCP26-201ENST00000436067 329 ntBASIC3.3□□□□□ -1.88
LITAFQ99732 RSU1P2-202ENST00000437884 485 ntBASIC3.3□□□□□ -1.88
LITAFQ99732 SKP1P1-201ENST00000438081 489 ntBASIC3.3□□□□□ -1.88
LITAFQ99732 AC004938.1-201ENST00000438468 308 ntBASIC3.3□□□□□ -1.88
LITAFQ99732 LINC00969-211ENST00000438608 525 ntTSL 5 BASIC3.3□□□□□ -1.88
LITAFQ99732 AC017074.2-201ENST00000439382 607 ntTSL 2 BASIC3.3□□□□□ -1.88
LITAFQ99732 LINC00113-203ENST00000442550 572 ntTSL 3 BASIC3.3□□□□□ -1.88
LITAFQ99732 LINC00704-202ENST00000443994 418 ntTSL 2 BASIC3.3□□□□□ -1.88
LITAFQ99732 RPL7P36-201ENST00000444633 681 ntBASIC3.3□□□□□ -1.88
LITAFQ99732 AC007383.1-201ENST00000445875 636 ntBASIC3.3□□□□□ -1.88
LITAFQ99732 ST6GAL2-IT1-201ENST00000446058 388 ntTSL 2 BASIC3.3□□□□□ -1.88
LITAFQ99732 AC073284.1-201ENST00000448086 404 ntTSL 3 BASIC3.3□□□□□ -1.88
LITAFQ99732 UTAT33-202ENST00000449177 565 ntTSL 2 BASIC3.3□□□□□ -1.88
LITAFQ99732 AC003071.1-201ENST00000451219 789 ntBASIC3.3□□□□□ -1.88
LITAFQ99732 AL358075.2-201ENST00000452785 339 ntTSL 2 BASIC3.3□□□□□ -1.88
LITAFQ99732 HIGD1AP8-201ENST00000453927 274 ntBASIC3.3□□□□□ -1.88
LITAFQ99732 Z82190.1-201ENST00000454534 490 ntBASIC3.3□□□□□ -1.88
LITAFQ99732 TRBV26-201ENST00000456572 344 ntBASIC3.3□□□□□ -1.88
LITAFQ99732 MTCO1P42-201ENST00000457379 726 ntBASIC3.3□□□□□ -1.88
LITAFQ99732 AL512303.1-201ENST00000458693 465 ntTSL 3 BASIC3.3□□□□□ -1.88
LITAFQ99732 RN7SL443P-201ENST00000464331 290 ntBASIC3.3□□□□□ -1.88
LITAFQ99732 MTCO3P38-201ENST00000468910 766 ntBASIC3.3□□□□□ -1.88
LITAFQ99732 DCUN1D1-204ENST00000469954 970 ntTSL 3 BASIC3.3□□□□□ -1.88
LITAFQ99732 AL035454.1-201ENST00000470758 433 ntTSL 3 BASIC3.3□□□□□ -1.88
LITAFQ99732 RPS3AP17-201ENST00000472594 777 ntBASIC3.3□□□□□ -1.88
LITAFQ99732 OR52A4P-201ENST00000472867 958 ntBASIC3.3□□□□□ -1.88
LITAFQ99732 RN7SL41P-201ENST00000476144 297 ntBASIC3.3□□□□□ -1.88
LITAFQ99732 ACTR3P3-201ENST00000480448 893 ntBASIC3.3□□□□□ -1.88
LITAFQ99732 LINC02040-201ENST00000481004 556 ntTSL 5 BASIC3.3□□□□□ -1.88
LITAFQ99732 AC109462.1-201ENST00000491087 368 ntBASIC3.3□□□□□ -1.88
LITAFQ99732 AC090453.1-201ENST00000495560 436 ntBASIC3.3□□□□□ -1.88
LITAFQ99732 AC002460.1-201ENST00000504394 370 ntTSL 3 BASIC3.3□□□□□ -1.88
LITAFQ99732 SUB1-206ENST00000506237 908 ntAPPRIS P1 TSL 2 BASIC3.3□□□□□ -1.88
LITAFQ99732 LYRM7-202ENST00000507584 317 ntTSL 2 BASIC3.3□□□□□ -1.88
LITAFQ99732 CSN1S2AP-204ENST00000512167 671 ntTSL 3 BASIC3.3□□□□□ -1.88
LITAFQ99732 AC034238.3-201ENST00000512349 591 ntTSL 4 BASIC3.3□□□□□ -1.88
LITAFQ99732 AC034159.1-201ENST00000513885 583 ntBASIC3.3□□□□□ -1.88
LITAFQ99732 AC063919.1-201ENST00000514281 254 ntTSL 3 BASIC3.3□□□□□ -1.88
LITAFQ99732 UBE2Q2P10-201ENST00000514854 900 ntBASIC3.3□□□□□ -1.88
LITAFQ99732 RNU6-718P-201ENST00000516166 105 ntBASIC3.3□□□□□ -1.88
LITAFQ99732 RNU6-314P-201ENST00000516574 104 ntBASIC3.3□□□□□ -1.88
LITAFQ99732 SNORA18.6-201ENST00000516792 115 ntBASIC3.3□□□□□ -1.88
LITAFQ99732 RNU6-430P-201ENST00000517078 107 ntBASIC3.3□□□□□ -1.88
LITAFQ99732 AC012400.1-201ENST00000518452 381 ntBASIC3.3□□□□□ -1.88
LITAFQ99732 COX6CP8-201ENST00000522620 226 ntBASIC3.3□□□□□ -1.88
LITAFQ99732 AC012339.2-201ENST00000523996 453 ntBASIC3.3□□□□□ -1.88
LITAFQ99732 AF117829.1-202ENST00000524166 836 ntTSL 3 BASIC3.3□□□□□ -1.88
LITAFQ99732 AC055878.1-201ENST00000531858 281 ntTSL 3 BASIC3.3□□□□□ -1.88
LITAFQ99732 AP004607.5-201ENST00000532034 217 ntBASIC3.3□□□□□ -1.88
LITAFQ99732 AP003781.1-201ENST00000543403 404 ntTSL 3 BASIC3.3□□□□□ -1.88
LITAFQ99732 LINC01479-201ENST00000545520 509 ntTSL 2 BASIC3.3□□□□□ -1.88
LITAFQ99732 MED21-206ENST00000546323 575 ntTSL 3 BASIC3.3□□□□□ -1.88
LITAFQ99732 DNAL1-205ENST00000554339 548 ntTSL 5 BASIC3.3□□□□□ -1.88
LITAFQ99732 CYCSP38-201ENST00000559840 322 ntBASIC3.3□□□□□ -1.88
LITAFQ99732 AC006960.3-201ENST00000561845 705 ntBASIC3.3□□□□□ -1.88
LITAFQ99732 NQO1-206ENST00000564043 892 ntTSL 1 (best) BASIC3.3□□□□□ -1.88
LITAFQ99732 AC007495.1-203ENST00000569025 888 ntTSL 5 BASIC3.3□□□□□ -1.88
LITAFQ99732 AC008741.1-201ENST00000569456 510 ntTSL 3 BASIC3.3□□□□□ -1.88
LITAFQ99732 AL513324.1-201ENST00000575236 632 ntTSL 5 BASIC3.3□□□□□ -1.88
LITAFQ99732 AC090371.2-203ENST00000578782 473 ntTSL 3 BASIC3.3□□□□□ -1.88
LITAFQ99732 AC012588.1-201ENST00000583852 358 ntTSL 3 BASIC3.3□□□□□ -1.88
LITAFQ99732 AC091132.1-201ENST00000588189 547 ntTSL 5 BASIC3.3□□□□□ -1.88
LITAFQ99732 LINC01539-206ENST00000593282 678 ntTSL 4 BASIC3.3□□□□□ -1.88
LITAFQ99732 AL161729.4-201ENST00000604650 476 ntBASIC3.3□□□□□ -1.88
LITAFQ99732 AC090948.2-201ENST00000607363 564 ntBASIC3.3□□□□□ -1.88
LITAFQ99732 AC016769.4-201ENST00000616893 535 ntBASIC3.3□□□□□ -1.88
LITAFQ99732 MIR8080-201ENST00000622224 89 ntBASIC3.3□□□□□ -1.88
LITAFQ99732 Metazoa_SRP.93-201ENST00000622525 276 ntBASIC3.3□□□□□ -1.88
LITAFQ99732 AC132068.1-201ENST00000623805 459 ntBASIC3.3□□□□□ -1.88
LITAFQ99732 DYTN-201ENST00000452335 2051 ntAPPRIS P1 TSL 1 (best) BASIC3.3□□□□□ -1.88
LITAFQ99732 AP001267.1-201ENST00000531742 2074 ntTSL 2 BASIC3.3□□□□□ -1.88
LITAFQ99732 PMP2-201ENST00000256103 3608 ntAPPRIS P1 TSL 1 (best) BASIC3.3□□□□□ -1.88
LITAFQ99732 PANK1-203ENST00000342512 2703 ntAPPRIS P1 TSL 1 (best) BASIC3.3□□□□□ -1.88
LITAFQ99732 AL022322.2-201ENST00000624072 20397 ntBASIC3.3□□□□□ -1.88
LITAFQ99732 HNMT-202ENST00000280097 3295 ntAPPRIS P1 TSL 1 (best) BASIC3.3□□□□□ -1.88
LITAFQ99732 DDR2-202ENST00000367922 10160 ntAPPRIS P1 TSL 1 (best) BASIC3.3□□□□□ -1.88
LITAFQ99732 BANK1-203ENST00000444316 3141 ntTSL 2 BASIC3.3□□□□□ -1.88
LITAFQ99732 CEP57L1-203ENST00000368970 1680 ntAPPRIS ALT2 TSL 5 BASIC3.3□□□□□ -1.88
LITAFQ99732 RANBP3L-202ENST00000502994 2278 ntAPPRIS ALT1 TSL 2 BASIC3.3□□□□□ -1.88
LITAFQ99732 SOCS5-201ENST00000306503 4771 ntAPPRIS P1 TSL 1 (best) BASIC3.29□□□□□ -1.88
LITAFQ99732 MS4A1-202ENST00000389939 3372 ntAPPRIS P1 TSL 1 (best) BASIC3.29□□□□□ -1.88
LITAFQ99732 AIG1-208ENST00000494282 3393 ntTSL 1 (best) BASIC3.29□□□□□ -1.88
LITAFQ99732 MTRNR2L7-201ENST00000544824 1535 ntAPPRIS P1 BASIC3.29□□□□□ -1.88
LITAFQ99732 KPNA2P2-201ENST00000419546 1489 ntBASIC3.29□□□□□ -1.88
LITAFQ99732 SOS1-203ENST00000426016 8517 ntAPPRIS P2 TSL 2 BASIC3.29□□□□□ -1.88
LITAFQ99732 BDNF-AS-202ENST00000499568 2039 ntTSL 1 (best) BASIC3.29□□□□□ -1.88
LITAFQ99732 ARHGAP5-206ENST00000539826 4881 ntAPPRIS P3 TSL 1 (best) BASIC3.29□□□□□ -1.88
LITAFQ99732 TRAPPC13-204ENST00000438419 1437 ntAPPRIS P4 TSL 1 (best) BASIC3.29□□□□□ -1.88
LITAFQ99732 AC004520.1-201ENST00000608362 1413 ntBASIC3.29□□□□□ -1.88
LITAFQ99732 PHACTR4-201ENST00000373836 3107 ntAPPRIS P4 TSL 5 BASIC3.29□□□□□ -1.88
LITAFQ99732 ZNF681-201ENST00000402377 6497 ntAPPRIS P1 TSL 1 (best) BASIC3.29□□□□□ -1.88
LITAFQ99732 ATP13A3-211ENST00000619199 5227 ntTSL 2 BASIC3.29□□□□□ -1.88
LITAFQ99732 UBR1-201ENST00000290650 7761 ntAPPRIS P1 TSL 1 (best) BASIC3.29□□□□□ -1.88
Retrieved 100 of 98,524 protein–RNA pairs in 108.4 ms