Protein–RNA interactions for Protein: Q96RY7

IFT140, Intraflagellar transport protein 140 homolog, humanhuman

Predictions only

Length 1,462 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IFT140Q96RY7 AC106734.1-201ENST00000568646 663 ntBASIC5.17□□□□□ -1.58
IFT140Q96RY7 uc_338.1-201ENST00000612113 180 ntBASIC5.17□□□□□ -1.58
IFT140Q96RY7 AC073869.7-201ENST00000640874 297 ntBASIC5.17□□□□□ -1.58
IFT140Q96RY7 MBNL1-218ENST00000485910 4257 ntTSL 1 (best) BASIC5.17□□□□□ -1.58
IFT140Q96RY7 MAPK10-353ENST00000641803 8483 ntAPPRIS P2 BASIC5.17□□□□□ -1.58
IFT140Q96RY7 ASNSP3-201ENST00000451989 1306 ntBASIC5.17□□□□□ -1.58
IFT140Q96RY7 OR1S2-201ENST00000302592 978 ntBASIC5.16□□□□□ -1.58
IFT140Q96RY7 CRP-202ENST00000368110 667 ntTSL 3 BASIC5.16□□□□□ -1.58
IFT140Q96RY7 RNA5SP293-201ENST00000410527 113 ntBASIC5.16□□□□□ -1.58
IFT140Q96RY7 AL035701.1-201ENST00000444038 462 ntTSL 3 BASIC5.16□□□□□ -1.58
IFT140Q96RY7 RPL5P30-201ENST00000465511 891 ntBASIC5.16□□□□□ -1.58
IFT140Q96RY7 RPS26P15-201ENST00000488067 348 ntBASIC5.16□□□□□ -1.58
IFT140Q96RY7 AC093864.1-201ENST00000504555 745 ntTSL 5 BASIC5.16□□□□□ -1.58
IFT140Q96RY7 CTHRC1-204ENST00000520880 560 ntTSL 4 BASIC5.16□□□□□ -1.58
IFT140Q96RY7 SNHG5-221ENST00000624295 632 ntTSL 5 BASIC5.16□□□□□ -1.58
IFT140Q96RY7 KLRD1-204ENST00000381908 15549 ntAPPRIS P4 TSL 1 (best) BASIC5.16□□□□□ -1.58
IFT140Q96RY7 ABI3BP-215ENST00000495063 3714 ntTSL 1 (best) BASIC5.16□□□□□ -1.58
IFT140Q96RY7 PPIP5K2-217ENST00000627916 6010 ntAPPRIS ALT2 TSL 5 BASIC5.15□□□□□ -1.58
IFT140Q96RY7 LINC02030-201ENST00000492683 1602 ntTSL 5 BASIC5.15□□□□□ -1.58
IFT140Q96RY7 AC073073.2-201ENST00000609827 2578 ntBASIC5.15□□□□□ -1.58
IFT140Q96RY7 UTP20-201ENST00000261637 9025 ntAPPRIS P1 TSL 1 (best) BASIC5.15□□□□□ -1.58
IFT140Q96RY7 MIR22-201ENST00000362190 85 ntBASIC5.15□□□□□ -1.58
IFT140Q96RY7 OR6C3-201ENST00000379667 936 ntAPPRIS P1 BASIC5.15□□□□□ -1.58
IFT140Q96RY7 TRAV23DV6-201ENST00000390451 409 ntAPPRIS P1 BASIC5.15□□□□□ -1.58
IFT140Q96RY7 RNA5SP104-201ENST00000410989 118 ntBASIC5.15□□□□□ -1.58
IFT140Q96RY7 AL627309.4-201ENST00000496488 457 ntTSL 5 BASIC5.15□□□□□ -1.58
IFT140Q96RY7 RFPL4AP3-201ENST00000515267 345 ntBASIC5.15□□□□□ -1.58
IFT140Q96RY7 RNU4-29P-201ENST00000515943 174 ntBASIC5.15□□□□□ -1.58
IFT140Q96RY7 RNU4ATAC6P-201ENST00000516592 126 ntBASIC5.15□□□□□ -1.58
IFT140Q96RY7 AC007495.1-203ENST00000569025 888 ntTSL 5 BASIC5.15□□□□□ -1.58
IFT140Q96RY7 AC138761.3-201ENST00000579993 334 ntBASIC5.15□□□□□ -1.58
IFT140Q96RY7 VN1R78P-201ENST00000597393 564 ntBASIC5.15□□□□□ -1.58
IFT140Q96RY7 OR4K13-202ENST00000641664 5980 ntAPPRIS P1 BASIC5.15□□□□□ -1.58
IFT140Q96RY7 DNAH8-205ENST00000449981 12940 ntTSL 5 BASIC5.15□□□□□ -1.58
IFT140Q96RY7 SMCO3-201ENST00000316048 2104 ntAPPRIS P1 TSL 1 (best) BASIC5.15□□□□□ -1.58
IFT140Q96RY7 LINC00907-209ENST00000593234 3376 ntTSL 1 (best) BASIC5.15□□□□□ -1.59
IFT140Q96RY7 MGA-202ENST00000545763 11413 ntAPPRIS ALT2 TSL 5 BASIC5.15□□□□□ -1.59
IFT140Q96RY7 RPL7P25-201ENST00000404151 721 ntBASIC5.14□□□□□ -1.59
IFT140Q96RY7 MYL8P-204ENST00000431574 518 ntBASIC5.14□□□□□ -1.59
IFT140Q96RY7 SATB1-216ENST00000491519 1000 ntTSL 2 BASIC5.14□□□□□ -1.59
IFT140Q96RY7 HMGB1P19-201ENST00000517578 577 ntBASIC5.14□□□□□ -1.59
IFT140Q96RY7 MYRFL-202ENST00000535034 881 ntTSL 1 (best) BASIC5.14□□□□□ -1.59
IFT140Q96RY7 AL355922.5-201ENST00000553534 351 ntTSL 3 BASIC5.14□□□□□ -1.59
IFT140Q96RY7 CYCSP39-201ENST00000565821 309 ntBASIC5.14□□□□□ -1.59
IFT140Q96RY7 AC018552.3-201ENST00000567416 561 ntBASIC5.14□□□□□ -1.59
IFT140Q96RY7 MIR7843-201ENST00000622274 79 ntBASIC5.14□□□□□ -1.59
IFT140Q96RY7 AC243829.7-201ENST00000633081 225 ntBASIC5.14□□□□□ -1.59
IFT140Q96RY7 CSMD3-201ENST00000297405 13212 ntAPPRIS P1 TSL 1 (best) BASIC5.14□□□□□ -1.59
IFT140Q96RY7 TRDN-206ENST00000628709 1661 ntAPPRIS ALT2 TSL 1 (best) BASIC5.14□□□□□ -1.59
IFT140Q96RY7 CCDC146-201ENST00000285871 3333 ntAPPRIS P2 TSL 1 (best) BASIC5.14□□□□□ -1.59
IFT140Q96RY7 BMPR1B-203ENST00000440890 5388 ntTSL 2 BASIC5.14□□□□□ -1.59
IFT140Q96RY7 OR2AT4-202ENST00000641504 8661 ntAPPRIS P1 BASIC5.14□□□□□ -1.59
IFT140Q96RY7 CYSLTR2-201ENST00000282018 4672 ntAPPRIS P1 BASIC5.13□□□□□ -1.59
IFT140Q96RY7 C4orf47-201ENST00000378850 1134 ntAPPRIS P1 TSL 1 (best) BASIC5.13□□□□□ -1.59
IFT140Q96RY7 SNORD15B-201ENST00000384714 146 ntBASIC5.13□□□□□ -1.59
IFT140Q96RY7 RPL21P40-201ENST00000428586 483 ntBASIC5.13□□□□□ -1.59
IFT140Q96RY7 AC007563.3-201ENST00000433233 371 ntBASIC5.13□□□□□ -1.59
IFT140Q96RY7 LINC02283-201ENST00000511634 474 ntTSL 3 BASIC5.13□□□□□ -1.59
IFT140Q96RY7 OR5M10-201ENST00000526812 1052 ntAPPRIS P1 BASIC5.13□□□□□ -1.59
IFT140Q96RY7 AC013799.1-201ENST00000531157 348 ntTSL 2 BASIC5.13□□□□□ -1.59
IFT140Q96RY7 AC009097.3-201ENST00000563557 1018 ntBASIC5.13□□□□□ -1.59
IFT140Q96RY7 AC233309.1-201ENST00000619522 751 ntBASIC5.13□□□□□ -1.59
IFT140Q96RY7 AC079298.2-201ENST00000623885 459 ntBASIC5.13□□□□□ -1.59
IFT140Q96RY7 EPHA7-202ENST00000369303 6588 ntAPPRIS P1 TSL 1 (best) BASIC5.13□□□□□ -1.59
IFT140Q96RY7 PARP8-201ENST00000281631 7177 ntAPPRIS P1 TSL 1 (best) BASIC5.13□□□□□ -1.59
IFT140Q96RY7 PKHD1-202ENST00000371117 16282 ntAPPRIS P4 TSL 1 (best) BASIC5.13□□□□□ -1.59
IFT140Q96RY7 RBMS3-205ENST00000434693 8540 ntTSL 5 BASIC5.13□□□□□ -1.59
IFT140Q96RY7 PLCB4-204ENST00000378501 5833 ntAPPRIS P4 TSL 5 BASIC5.13□□□□□ -1.59
IFT140Q96RY7 TDRD15-201ENST00000405799 6135 ntAPPRIS P1 TSL 2 BASIC5.13□□□□□ -1.59
IFT140Q96RY7 PGGT1B-203ENST00000419445 9545 ntAPPRIS P1 TSL 1 (best) BASIC5.13□□□□□ -1.59
IFT140Q96RY7 EQTN-201ENST00000380031 725 ntAPPRIS ALT2 TSL 1 (best) BASIC5.13□□□□□ -1.59
IFT140Q96RY7 AL021026.1-201ENST00000422841 658 ntTSL 3 BASIC5.13□□□□□ -1.59
IFT140Q96RY7 AC034159.1-201ENST00000513885 583 ntBASIC5.13□□□□□ -1.59
IFT140Q96RY7 MYL12AP1-201ENST00000518490 515 ntBASIC5.13□□□□□ -1.59
IFT140Q96RY7 AC079600.2-201ENST00000550076 130 ntBASIC5.13□□□□□ -1.59
IFT140Q96RY7 AC011270.1-201ENST00000558606 583 ntBASIC5.13□□□□□ -1.59
IFT140Q96RY7 ATP5F1P7-201ENST00000567330 760 ntBASIC5.13□□□□□ -1.59
IFT140Q96RY7 AC015813.4-201ENST00000610469 179 ntBASIC5.13□□□□□ -1.59
IFT140Q96RY7 AL590808.1-201ENST00000618696 141 ntBASIC5.13□□□□□ -1.59
IFT140Q96RY7 CDKL3-210ENST00000523832 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC5.12□□□□□ -1.59
IFT140Q96RY7 PHC3-215ENST00000495893 12666 ntAPPRIS P1 TSL 1 (best) BASIC5.12□□□□□ -1.59
IFT140Q96RY7 PLCL1-203ENST00000437704 5979 ntTSL 1 (best) BASIC5.12□□□□□ -1.59
IFT140Q96RY7 STK33-208ENST00000447869 3103 ntAPPRIS P1 TSL 1 (best) BASIC5.12□□□□□ -1.59
IFT140Q96RY7 SPANXN4-201ENST00000370504 560 ntAPPRIS ALT2 TSL 5 BASIC5.12□□□□□ -1.59
IFT140Q96RY7 RPS24P12-201ENST00000402084 394 ntBASIC5.12□□□□□ -1.59
IFT140Q96RY7 RPSAP41-201ENST00000439695 860 ntBASIC5.12□□□□□ -1.59
IFT140Q96RY7 RPS20P32-201ENST00000456044 356 ntBASIC5.12□□□□□ -1.59
IFT140Q96RY7 RPS4XP22-201ENST00000480755 780 ntBASIC5.12□□□□□ -1.59
IFT140Q96RY7 OR4C2P-201ENST00000530855 1064 ntBASIC5.12□□□□□ -1.59
IFT140Q96RY7 MIR4524B-201ENST00000581569 115 ntBASIC5.12□□□□□ -1.59
IFT140Q96RY7 uc_338.32-201ENST00000615087 172 ntBASIC5.12□□□□□ -1.59
IFT140Q96RY7 EXTL2-201ENST00000370113 2835 ntAPPRIS P1 TSL 1 (best) BASIC5.11□□□□□ -1.59
IFT140Q96RY7 C2orf16-202ENST00000447166 16401 ntAPPRIS ALT2 TSL 3 BASIC5.11□□□□□ -1.59
IFT140Q96RY7 AC011242.1-201ENST00000433596 1158 ntBASIC5.11□□□□□ -1.59
IFT140Q96RY7 AC104653.1-202ENST00000446401 390 ntTSL 3 BASIC5.11□□□□□ -1.59
IFT140Q96RY7 AC007000.3-201ENST00000459742 617 ntTSL 3 BASIC5.11□□□□□ -1.59
IFT140Q96RY7 AC114967.1-201ENST00000504890 259 ntBASIC5.11□□□□□ -1.59
IFT140Q96RY7 LINC01909-202ENST00000584919 815 ntTSL 3 BASIC5.11□□□□□ -1.59
IFT140Q96RY7 AL139395.1-201ENST00000603662 160 ntBASIC5.11□□□□□ -1.59
IFT140Q96RY7 AC241377.1-201ENST00000619797 406 ntBASIC5.11□□□□□ -1.59
Retrieved 100 of 98,524 protein–RNA pairs in 77.2 ms