Protein–RNA interactions for Protein: Q53GD3

SLC44A4, Choline transporter-like protein 4, humanhuman

Predictions only

Length 710 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC44A4Q53GD3 AC004982.1-201ENST00000608770 1655 ntTSL 4 BASIC4.99□□□□□ -1.61
SLC44A4Q53GD3 UBE2W-207ENST00000602593 2201 ntAPPRIS P1 TSL 1 (best) BASIC4.99□□□□□ -1.61
SLC44A4Q53GD3 ANKRD20A17P-201ENST00000511745 1330 ntBASIC4.98□□□□□ -1.61
SLC44A4Q53GD3 GPR85-201ENST00000297146 5079 ntAPPRIS P1 TSL 1 (best) BASIC4.98□□□□□ -1.61
SLC44A4Q53GD3 XIRP2-203ENST00000409195 12675 ntTSL 5 BASIC4.98□□□□□ -1.61
SLC44A4Q53GD3 TCHHL1-201ENST00000368806 3603 ntAPPRIS P1 TSL 1 (best) BASIC4.98□□□□□ -1.61
SLC44A4Q53GD3 RXFP1-206ENST00000460056 2735 ntTSL 2 BASIC4.98□□□□□ -1.61
SLC44A4Q53GD3 ZNF732-202ENST00000619749 2179 ntAPPRIS ALT2 TSL 2 BASIC4.98□□□□□ -1.61
SLC44A4Q53GD3 KIF23-206ENST00000558585 2296 ntTSL 2 BASIC4.98□□□□□ -1.61
SLC44A4Q53GD3 PPIG-201ENST00000260970 6368 ntAPPRIS P1 TSL 1 (best) BASIC4.98□□□□□ -1.61
SLC44A4Q53GD3 PTPN13-201ENST00000316707 7546 ntAPPRIS ALT2 TSL 1 (best) BASIC4.98□□□□□ -1.61
SLC44A4Q53GD3 PRIM2-202ENST00000370687 909 ntTSL 3 BASIC4.98□□□□□ -1.61
SLC44A4Q53GD3 LINC00474-201ENST00000374014 769 ntTSL 1 (best) BASIC4.98□□□□□ -1.61
SLC44A4Q53GD3 BANF2-202ENST00000377805 444 ntAPPRIS P1 TSL 1 (best) BASIC4.98□□□□□ -1.61
SLC44A4Q53GD3 RNU6-1293P-201ENST00000384077 107 ntBASIC4.98□□□□□ -1.61
SLC44A4Q53GD3 AL078604.1-201ENST00000404609 466 ntBASIC4.98□□□□□ -1.61
SLC44A4Q53GD3 AL035079.1-201ENST00000405210 287 ntBASIC4.98□□□□□ -1.61
SLC44A4Q53GD3 AL450338.1-201ENST00000407987 512 ntBASIC4.98□□□□□ -1.61
SLC44A4Q53GD3 RNU4-25P-201ENST00000410569 230 ntBASIC4.98□□□□□ -1.61
SLC44A4Q53GD3 AF274854.1-201ENST00000413236 615 ntBASIC4.98□□□□□ -1.61
SLC44A4Q53GD3 TBCAP2-201ENST00000416175 326 ntBASIC4.98□□□□□ -1.61
SLC44A4Q53GD3 AL158837.1-201ENST00000417644 452 ntTSL 2 BASIC4.98□□□□□ -1.61
SLC44A4Q53GD3 GS1-594A7.3-201ENST00000421585 574 ntTSL 2 BASIC4.98□□□□□ -1.61
SLC44A4Q53GD3 FABP7P1-201ENST00000424004 391 ntBASIC4.98□□□□□ -1.61
SLC44A4Q53GD3 RPL12P34-201ENST00000424532 479 ntBASIC4.98□□□□□ -1.61
SLC44A4Q53GD3 AL031736.2-201ENST00000426573 787 ntBASIC4.98□□□□□ -1.61
SLC44A4Q53GD3 AF212831.1-201ENST00000430064 377 ntTSL 3 BASIC4.98□□□□□ -1.61
SLC44A4Q53GD3 RPL36P19-201ENST00000430744 301 ntBASIC4.98□□□□□ -1.61
SLC44A4Q53GD3 AL591178.1-201ENST00000439239 454 ntTSL 5 BASIC4.98□□□□□ -1.61
SLC44A4Q53GD3 AL359636.3-201ENST00000439471 301 ntTSL 2 BASIC4.98□□□□□ -1.61
SLC44A4Q53GD3 AL450023.3-201ENST00000440592 271 ntBASIC4.98□□□□□ -1.61
SLC44A4Q53GD3 AL356859.1-201ENST00000449180 414 ntTSL 5 BASIC4.98□□□□□ -1.61
SLC44A4Q53GD3 ITGA9-AS1-208ENST00000449586 726 ntTSL 3 BASIC4.98□□□□□ -1.61
SLC44A4Q53GD3 DDX39BP2-208ENST00000453923 258 ntBASIC4.98□□□□□ -1.61
SLC44A4Q53GD3 AC007000.3-201ENST00000459742 617 ntTSL 3 BASIC4.98□□□□□ -1.61
SLC44A4Q53GD3 RPL7AP28-201ENST00000464513 571 ntBASIC4.98□□□□□ -1.61
SLC44A4Q53GD3 RAD51AP1P1-201ENST00000484195 1001 ntBASIC4.98□□□□□ -1.61
SLC44A4Q53GD3 RPL7P38-201ENST00000488396 739 ntBASIC4.98□□□□□ -1.61
SLC44A4Q53GD3 RPL30P11-201ENST00000495304 339 ntBASIC4.98□□□□□ -1.61
SLC44A4Q53GD3 AC104685.1-201ENST00000502445 371 ntBASIC4.98□□□□□ -1.61
SLC44A4Q53GD3 AC093752.2-201ENST00000506942 573 ntTSL 5 BASIC4.98□□□□□ -1.61
SLC44A4Q53GD3 HMGB1P28-201ENST00000507778 552 ntBASIC4.98□□□□□ -1.61
SLC44A4Q53GD3 AC005178.1-201ENST00000508392 440 ntBASIC4.98□□□□□ -1.61
SLC44A4Q53GD3 ATP1B1P1-201ENST00000509767 915 ntBASIC4.98□□□□□ -1.61
SLC44A4Q53GD3 LTV1P1-201ENST00000510683 1237 ntBASIC4.98□□□□□ -1.61
SLC44A4Q53GD3 LINC02144-201ENST00000511417 592 ntTSL 4 BASIC4.98□□□□□ -1.61
SLC44A4Q53GD3 AC011352.1-201ENST00000512300 793 ntBASIC4.98□□□□□ -1.61
SLC44A4Q53GD3 RNU6-488P-201ENST00000515918 99 ntBASIC4.98□□□□□ -1.61
SLC44A4Q53GD3 OR5AK1P-201ENST00000524837 922 ntBASIC4.98□□□□□ -1.61
SLC44A4Q53GD3 SLC2A13P1-201ENST00000531560 322 ntBASIC4.98□□□□□ -1.61
SLC44A4Q53GD3 AC009509.2-201ENST00000538640 429 ntTSL 2 BASIC4.98□□□□□ -1.61
SLC44A4Q53GD3 SNHG1-217ENST00000541578 588 ntTSL 3 BASIC4.98□□□□□ -1.61
SLC44A4Q53GD3 AC133555.2-201ENST00000550213 292 ntBASIC4.98□□□□□ -1.61
SLC44A4Q53GD3 AC009803.2-201ENST00000550378 665 ntTSL 5 BASIC4.98□□□□□ -1.61
SLC44A4Q53GD3 LINC00644-201ENST00000555156 295 ntTSL 2 BASIC4.98□□□□□ -1.61
SLC44A4Q53GD3 AL512347.1-201ENST00000566420 503 ntBASIC4.98□□□□□ -1.61
SLC44A4Q53GD3 AC074237.1-201ENST00000577674 471 ntTSL 3 BASIC4.98□□□□□ -1.61
SLC44A4Q53GD3 LINC01893-201ENST00000581750 479 ntTSL 3 BASIC4.98□□□□□ -1.61
SLC44A4Q53GD3 LINC01899-202ENST00000583756 575 ntTSL 3 BASIC4.98□□□□□ -1.61
SLC44A4Q53GD3 AC097467.3-208ENST00000593486 670 ntTSL 5 BASIC4.98□□□□□ -1.61
SLC44A4Q53GD3 AP000811.1-201ENST00000603803 651 ntBASIC4.98□□□□□ -1.61
SLC44A4Q53GD3 AC005191.1-201ENST00000603950 358 ntBASIC4.98□□□□□ -1.61
SLC44A4Q53GD3 LINC00904-201ENST00000604453 471 ntTSL 2 BASIC4.98□□□□□ -1.61
SLC44A4Q53GD3 RN7SKP299-201ENST00000606679 301 ntBASIC4.98□□□□□ -1.61
SLC44A4Q53GD3 AL022238.2-202ENST00000607915 658 ntTSL 5 BASIC4.98□□□□□ -1.61
SLC44A4Q53GD3 IL33-205ENST00000611532 757 ntTSL 1 (best) BASIC4.98□□□□□ -1.61
SLC44A4Q53GD3 AL049794.2-201ENST00000616301 365 ntBASIC4.98□□□□□ -1.61
SLC44A4Q53GD3 RNU6-156P-201ENST00000621869 107 ntBASIC4.98□□□□□ -1.61
SLC44A4Q53GD3 MTND4P34-201ENST00000572715 1371 ntBASIC4.98□□□□□ -1.61
SLC44A4Q53GD3 GRAMD2B-210ENST00000511134 1577 ntTSL 2 BASIC4.98□□□□□ -1.61
SLC44A4Q53GD3 AC090017.1-201ENST00000548612 1779 ntBASIC4.98□□□□□ -1.61
SLC44A4Q53GD3 DCLRE1A-201ENST00000361384 4468 ntAPPRIS P1 TSL 1 (best) BASIC4.98□□□□□ -1.61
SLC44A4Q53GD3 TIGD2-201ENST00000317005 2083 ntAPPRIS P1 BASIC4.98□□□□□ -1.61
SLC44A4Q53GD3 OR9G1-202ENST00000642097 3611 ntAPPRIS P1 BASIC4.98□□□□□ -1.61
SLC44A4Q53GD3 DAZ1-205ENST00000540248 3268 ntTSL 5 BASIC4.98□□□□□ -1.61
SLC44A4Q53GD3 ERI2-202ENST00000357967 3499 ntAPPRIS P1 TSL 5 BASIC4.98□□□□□ -1.61
SLC44A4Q53GD3 RGS5-212ENST00000618415 5812 ntTSL 4 BASIC4.98□□□□□ -1.61
SLC44A4Q53GD3 AC092104.1-201ENST00000497346 1441 ntBASIC4.97□□□□□ -1.61
SLC44A4Q53GD3 HGF-201ENST00000222390 5989 ntAPPRIS P3 TSL 1 (best) BASIC4.97□□□□□ -1.61
SLC44A4Q53GD3 AC107081.3-201ENST00000612715 2034 ntBASIC4.97□□□□□ -1.61
SLC44A4Q53GD3 MPDZ-211ENST00000536827 6176 ntAPPRIS ALT2 TSL 1 (best) BASIC4.97□□□□□ -1.61
SLC44A4Q53GD3 ASTE1-208ENST00000514044 2504 ntTSL 1 (best) BASIC4.97□□□□□ -1.61
SLC44A4Q53GD3 WDR5B-201ENST00000330689 3720 ntAPPRIS P1 BASIC4.97□□□□□ -1.61
SLC44A4Q53GD3 ATF7IP-214ENST00000540793 4142 ntAPPRIS P3 TSL 1 (best) BASIC4.97□□□□□ -1.61
SLC44A4Q53GD3 FAM184A-204ENST00000368475 3392 ntTSL 2 BASIC4.97□□□□□ -1.61
SLC44A4Q53GD3 AC087190.4-201ENST00000574616 8334 ntBASIC4.97□□□□□ -1.61
SLC44A4Q53GD3 FCHSD2-205ENST00000409853 1867 ntTSL 1 (best) BASIC4.97□□□□□ -1.61
SLC44A4Q53GD3 AC104118.1-201ENST00000607625 1589 ntBASIC4.97□□□□□ -1.61
SLC44A4Q53GD3 Y_RNA.25-201ENST00000362528 102 ntBASIC4.97□□□□□ -1.61
SLC44A4Q53GD3 TEX35-202ENST00000367639 785 ntAPPRIS ALT2 TSL 1 (best) BASIC4.97□□□□□ -1.61
SLC44A4Q53GD3 AL158212.2-201ENST00000369391 460 ntTSL 3 BASIC4.97□□□□□ -1.61
SLC44A4Q53GD3 TMCO2-201ENST00000372766 739 ntAPPRIS P1 TSL 1 (best) BASIC4.97□□□□□ -1.61
SLC44A4Q53GD3 TNFRSF17-202ENST00000396495 668 ntAPPRIS ALT2 TSL 1 (best) BASIC4.97□□□□□ -1.61
SLC44A4Q53GD3 RPL23AP29-201ENST00000397284 453 ntBASIC4.97□□□□□ -1.61
SLC44A4Q53GD3 OTUD6B-202ENST00000404789 1089 ntTSL 1 (best) BASIC4.97□□□□□ -1.61
SLC44A4Q53GD3 NCSTNP1-201ENST00000406229 144 ntBASIC4.97□□□□□ -1.61
SLC44A4Q53GD3 SNX10-204ENST00000409838 944 ntTSL 1 (best) BASIC4.97□□□□□ -1.61
SLC44A4Q53GD3 AL354726.1-201ENST00000411981 402 ntTSL 2 BASIC4.97□□□□□ -1.61
SLC44A4Q53GD3 LINC01934-201ENST00000414750 391 ntTSL 3 BASIC4.97□□□□□ -1.61
SLC44A4Q53GD3 MTCO3P41-201ENST00000414801 328 ntBASIC4.97□□□□□ -1.61
Retrieved 100 of 98,524 protein–RNA pairs in 106.3 ms