Protein–RNA interactions for Protein: P59025

RTP1, Receptor-transporting protein 1, humanhuman

Predictions only

Length 263 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTP1P59025 SCAF11-212ENST00000549162 3934 ntTSL 1 (best) BASIC5.75□□□□□ -1.49
RTP1P59025 RAPGEF2-201ENST00000264431 6949 ntAPPRIS P1 TSL 1 (best) BASIC5.75□□□□□ -1.49
RTP1P59025 DCAF13P1-201ENST00000495256 1330 ntBASIC5.74□□□□□ -1.49
RTP1P59025 MAP2-205ENST00000392194 5303 ntTSL 1 (best) BASIC5.74□□□□□ -1.49
RTP1P59025 RSF1-204ENST00000480887 5318 ntAPPRIS ALT2 TSL 1 (best) BASIC5.74□□□□□ -1.49
RTP1P59025 CHRM2-203ENST00000445907 5918 ntAPPRIS P1 TSL 1 (best) BASIC5.74□□□□□ -1.49
RTP1P59025 AL355306.2-205ENST00000635395 1646 ntTSL 5 BASIC5.74□□□□□ -1.49
RTP1P59025 GTF2IRD2P1-202ENST00000618962 3055 ntTSL 1 (best) BASIC5.74□□□□□ -1.49
RTP1P59025 ABI2-204ENST00000295851 22209 ntTSL 1 (best) BASIC5.74□□□□□ -1.49
RTP1P59025 SEC24D-211ENST00000511481 2626 ntTSL 1 (best) BASIC5.74□□□□□ -1.49
RTP1P59025 OR4F5-202ENST00000641515 2618 ntAPPRIS P1 BASIC5.74□□□□□ -1.49
RTP1P59025 RAB18-209ENST00000621805 4894 ntTSL 1 (best) BASIC5.74□□□□□ -1.49
RTP1P59025 CFAP126-201ENST00000367974 774 ntAPPRIS P1 TSL 2 BASIC5.74□□□□□ -1.49
RTP1P59025 SUGT1P1-201ENST00000379514 476 ntBASIC5.74□□□□□ -1.49
RTP1P59025 AC025750.1-201ENST00000399891 379 ntBASIC5.74□□□□□ -1.49
RTP1P59025 HMGB1P11-201ENST00000413899 637 ntBASIC5.74□□□□□ -1.49
RTP1P59025 AL121885.1-201ENST00000417957 451 ntTSL 3 BASIC5.74□□□□□ -1.49
RTP1P59025 DPPA2P2-201ENST00000418220 897 ntBASIC5.74□□□□□ -1.49
RTP1P59025 AL162726.4-201ENST00000422010 673 ntTSL 5 BASIC5.74□□□□□ -1.49
RTP1P59025 TXNDC8-204ENST00000423740 356 ntTSL 1 (best) BASIC5.74□□□□□ -1.49
RTP1P59025 ZYG11AP1-201ENST00000430329 837 ntBASIC5.74□□□□□ -1.49
RTP1P59025 RPL36AP15-201ENST00000444514 266 ntBASIC5.74□□□□□ -1.49
RTP1P59025 AP1S3-208ENST00000446015 499 ntAPPRIS ALT1 TSL 1 (best) BASIC5.74□□□□□ -1.49
RTP1P59025 AL138767.2-201ENST00000446794 168 ntTSL 3 BASIC5.74□□□□□ -1.49
RTP1P59025 AC048351.1-202ENST00000449483 735 ntTSL 3 BASIC5.74□□□□□ -1.49
RTP1P59025 AL935212.3-201ENST00000450729 284 ntBASIC5.74□□□□□ -1.49
RTP1P59025 BX842559.2-201ENST00000451418 605 ntBASIC5.74□□□□□ -1.49
RTP1P59025 ARL4AP2-201ENST00000507378 601 ntBASIC5.74□□□□□ -1.49
RTP1P59025 AC016559.2-201ENST00000510759 359 ntBASIC5.74□□□□□ -1.49
RTP1P59025 SCARNA15.1-201ENST00000516384 125 ntBASIC5.74□□□□□ -1.49
RTP1P59025 AC027369.5-201ENST00000533838 755 ntBASIC5.74□□□□□ -1.49
RTP1P59025 AC008083.2-201ENST00000546707 476 ntBASIC5.74□□□□□ -1.49
RTP1P59025 AL110118.1-201ENST00000553543 400 ntBASIC5.74□□□□□ -1.49
RTP1P59025 AL137129.1-201ENST00000555937 720 ntTSL 4 BASIC5.74□□□□□ -1.49
RTP1P59025 WDR61-205ENST00000558459 884 ntTSL 3 BASIC5.74□□□□□ -1.49
RTP1P59025 AC068112.1-201ENST00000580057 346 ntTSL 3 BASIC5.74□□□□□ -1.49
RTP1P59025 AC022960.1-201ENST00000582269 348 ntTSL 3 BASIC5.74□□□□□ -1.49
RTP1P59025 AC010618.3-202ENST00000598141 476 ntTSL 3 BASIC5.74□□□□□ -1.49
RTP1P59025 AC019193.2-201ENST00000610012 634 ntBASIC5.74□□□□□ -1.49
RTP1P59025 AC055764.2-201ENST00000610089 670 ntBASIC5.74□□□□□ -1.49
RTP1P59025 AL590282.1-201ENST00000610379 1136 ntBASIC5.74□□□□□ -1.49
RTP1P59025 DEC1-204ENST00000614246 210 ntAPPRIS ALT2 TSL 1 (best) BASIC5.74□□□□□ -1.49
RTP1P59025 AP001506.1-201ENST00000615444 211 ntBASIC5.74□□□□□ -1.49
RTP1P59025 KCNQ1OT1_3.1-201ENST00000616504 116 ntBASIC5.74□□□□□ -1.49
RTP1P59025 AC112204.3-201ENST00000623822 332 ntBASIC5.74□□□□□ -1.49
RTP1P59025 ABBA01000935.2-201ENST00000637477 838 ntBASIC5.74□□□□□ -1.49
RTP1P59025 C2orf83-206ENST00000642055 453 ntAPPRIS P3 BASIC5.74□□□□□ -1.49
RTP1P59025 TUBD1-214ENST00000592426 1460 ntAPPRIS P1 TSL 1 (best) BASIC5.74□□□□□ -1.49
RTP1P59025 TCN1-201ENST00000257264 1582 ntAPPRIS P1 TSL 1 (best) BASIC5.74□□□□□ -1.49
RTP1P59025 RNF217-201ENST00000359704 1784 ntTSL 1 (best) BASIC5.74□□□□□ -1.49
RTP1P59025 G3BP1-202ENST00000394123 10240 ntAPPRIS P1 TSL 1 (best) BASIC5.74□□□□□ -1.49
RTP1P59025 HIF1AN-201ENST00000299163 13011 ntAPPRIS P1 TSL 1 (best) BASIC5.74□□□□□ -1.49
RTP1P59025 MYO5A-201ENST00000356338 11971 ntAPPRIS ALT1 TSL 1 (best) BASIC5.74□□□□□ -1.49
RTP1P59025 LINC00550-201ENST00000629293 3434 ntTSL 1 (best) BASIC5.74□□□□□ -1.49
RTP1P59025 FAM197Y9-201ENST00000451062 2332 ntTSL 5 BASIC5.74□□□□□ -1.49
RTP1P59025 SMARCA2-201ENST00000302401 2242 ntTSL 2 BASIC5.74□□□□□ -1.49
RTP1P59025 RFX3-204ENST00000382004 9307 ntAPPRIS P1 TSL 1 (best) BASIC5.73□□□□□ -1.49
RTP1P59025 MOXD1-201ENST00000336749 2950 ntTSL 1 (best) BASIC5.73□□□□□ -1.49
RTP1P59025 LGI1-202ENST00000371418 2381 ntAPPRIS P1 TSL 1 (best) BASIC5.73□□□□□ -1.49
RTP1P59025 RAB30-212ENST00000533486 9929 ntAPPRIS P1 TSL 1 (best) BASIC5.73□□□□□ -1.49
RTP1P59025 OR5AN1-201ENST00000313940 1037 ntAPPRIS P1 BASIC5.73□□□□□ -1.49
RTP1P59025 MAP3K2-201ENST00000344908 2135 ntAPPRIS P1 TSL 1 (best) BASIC5.73□□□□□ -1.49
RTP1P59025 RNU6-582P-201ENST00000362989 107 ntBASIC5.73□□□□□ -1.49
RTP1P59025 Y_RNA.97-201ENST00000363094 102 ntBASIC5.73□□□□□ -1.49
RTP1P59025 RCAN3-201ENST00000374393 382 ntTSL 1 (best) BASIC5.73□□□□□ -1.49
RTP1P59025 MT-TD-201ENST00000387419 68 ntBASIC5.73□□□□□ -1.49
RTP1P59025 ERMN-204ENST00000409925 556 ntTSL 4 BASIC5.73□□□□□ -1.49
RTP1P59025 LINC01312-201ENST00000412745 775 ntTSL 3 BASIC5.73□□□□□ -1.49
RTP1P59025 AP000432.1-201ENST00000416641 516 ntTSL 3 BASIC5.73□□□□□ -1.49
RTP1P59025 AC083900.1-201ENST00000421964 469 ntTSL 2 BASIC5.73□□□□□ -1.49
RTP1P59025 C6orf52-203ENST00000426700 493 ntAPPRIS P2 TSL 2 BASIC5.73□□□□□ -1.49
RTP1P59025 RPL23AP4-201ENST00000427757 463 ntBASIC5.73□□□□□ -1.49
RTP1P59025 TIMM9P3-201ENST00000428659 274 ntBASIC5.73□□□□□ -1.49
RTP1P59025 AC009238.2-201ENST00000431026 355 ntBASIC5.73□□□□□ -1.49
RTP1P59025 LINC01935-201ENST00000431897 437 ntTSL 3 BASIC5.73□□□□□ -1.49
RTP1P59025 MTCYBP45-201ENST00000435243 565 ntBASIC5.73□□□□□ -1.49
RTP1P59025 AC004824.1-201ENST00000439577 311 ntTSL 5 BASIC5.73□□□□□ -1.49
RTP1P59025 AP000936.1-201ENST00000442124 483 ntTSL 5 BASIC5.73□□□□□ -1.49
RTP1P59025 NPM1P39-201ENST00000449818 867 ntBASIC5.73□□□□□ -1.49
RTP1P59025 AC021205.1-201ENST00000468797 348 ntBASIC5.73□□□□□ -1.49
RTP1P59025 OR52A4P-201ENST00000472867 958 ntBASIC5.73□□□□□ -1.49
RTP1P59025 RBM43P1-201ENST00000476891 1081 ntBASIC5.73□□□□□ -1.49
RTP1P59025 AC012123.2-201ENST00000485809 248 ntBASIC5.73□□□□□ -1.49
RTP1P59025 RNF138P1-201ENST00000502765 546 ntBASIC5.73□□□□□ -1.49
RTP1P59025 AC092546.1-202ENST00000505628 499 ntTSL 2 BASIC5.73□□□□□ -1.49
RTP1P59025 AC097173.1-201ENST00000505862 819 ntBASIC5.73□□□□□ -1.49
RTP1P59025 AC093689.1-203ENST00000505967 299 ntTSL 3 BASIC5.73□□□□□ -1.49
RTP1P59025 AC098799.3-201ENST00000506095 438 ntBASIC5.73□□□□□ -1.49
RTP1P59025 SNORA18.6-201ENST00000516792 115 ntBASIC5.73□□□□□ -1.49
RTP1P59025 IGKV1-32-201ENST00000519290 311 ntBASIC5.73□□□□□ -1.49
RTP1P59025 RGS5-218ENST00000526176 574 ntTSL 4 BASIC5.73□□□□□ -1.49
RTP1P59025 AP001893.2-201ENST00000526949 202 ntBASIC5.73□□□□□ -1.49
RTP1P59025 AC138360.1-201ENST00000552332 386 ntTSL 3 BASIC5.73□□□□□ -1.49
RTP1P59025 AL355095.1-201ENST00000554451 539 ntTSL 2 BASIC5.73□□□□□ -1.49
RTP1P59025 AC009554.1-201ENST00000559251 399 ntTSL 5 BASIC5.73□□□□□ -1.49
RTP1P59025 AC007599.2-201ENST00000573040 493 ntTSL 5 BASIC5.73□□□□□ -1.49
RTP1P59025 AC137800.2-201ENST00000574375 120 ntBASIC5.73□□□□□ -1.49
RTP1P59025 MIR5697-201ENST00000578045 78 ntBASIC5.73□□□□□ -1.49
RTP1P59025 MTCYBP13-201ENST00000578634 1093 ntBASIC5.73□□□□□ -1.49
RTP1P59025 MIR1254-2-201ENST00000579553 63 ntBASIC5.73□□□□□ -1.49
Retrieved 100 of 98,524 protein–RNA pairs in 104 ms