Protein–RNA interactions for Protein: P02461

COL3A1, Collagen alpha-1(III) chain, humanhuman

Predicted RBP Predictions only

Length 1,466 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL3A1P02461 C8orf22-201ENST00000303202 1499 ntTSL 1 (best) BASIC5.11□□□□□ -1.59
COL3A1P02461 MGA-202ENST00000545763 11413 ntAPPRIS ALT2 TSL 5 BASIC5.11□□□□□ -1.59
COL3A1P02461 KLRC4-KLRK1-201ENST00000539300 1507 ntAPPRIS P5 TSL 2 BASIC5.11□□□□□ -1.59
COL3A1P02461 RTN4-209ENST00000405240 4061 ntTSL 1 (best) BASIC5.11□□□□□ -1.59
COL3A1P02461 PPBP-201ENST00000296028 715 ntAPPRIS P1 TSL 1 (best) BASIC5.11□□□□□ -1.59
COL3A1P02461 MACC1-201ENST00000332878 2994 ntAPPRIS P1 TSL 1 (best) BASIC5.11□□□□□ -1.59
COL3A1P02461 C1orf105-201ENST00000367725 888 ntTSL 2 BASIC5.11□□□□□ -1.59
COL3A1P02461 RNU6-207P-201ENST00000384137 107 ntBASIC5.11□□□□□ -1.59
COL3A1P02461 SETP15-201ENST00000412724 337 ntBASIC5.11□□□□□ -1.59
COL3A1P02461 AC007179.1-201ENST00000415159 438 ntTSL 3 BASIC5.11□□□□□ -1.59
COL3A1P02461 AL449283.1-202ENST00000418249 604 ntBASIC5.11□□□□□ -1.59
COL3A1P02461 ARL2BPP3-201ENST00000421226 480 ntBASIC5.11□□□□□ -1.59
COL3A1P02461 LINC00397-201ENST00000422074 344 ntTSL 3 BASIC5.11□□□□□ -1.59
COL3A1P02461 AC018644.1-201ENST00000429934 551 ntBASIC5.11□□□□□ -1.59
COL3A1P02461 MTCO2P16-201ENST00000436962 677 ntBASIC5.11□□□□□ -1.59
COL3A1P02461 AL360221.1-201ENST00000445989 335 ntBASIC5.11□□□□□ -1.59
COL3A1P02461 AL359385.1-201ENST00000456509 365 ntBASIC5.11□□□□□ -1.59
COL3A1P02461 RPL21P18-201ENST00000469899 480 ntBASIC5.11□□□□□ -1.59
COL3A1P02461 LINC02146-201ENST00000504244 509 ntTSL 3 BASIC5.11□□□□□ -1.59
COL3A1P02461 LTV1P1-201ENST00000510683 1237 ntBASIC5.11□□□□□ -1.59
COL3A1P02461 RNU6-1129P-201ENST00000515964 104 ntBASIC5.11□□□□□ -1.59
COL3A1P02461 RN7SKP141-201ENST00000516167 338 ntBASIC5.11□□□□□ -1.59
COL3A1P02461 TBCA-203ENST00000517679 545 ntTSL 3 BASIC5.11□□□□□ -1.59
COL3A1P02461 OR4V1P-201ENST00000525394 1140 ntBASIC5.11□□□□□ -1.59
COL3A1P02461 AC022880.1-201ENST00000534017 973 ntBASIC5.11□□□□□ -1.59
COL3A1P02461 AP000777.1-201ENST00000541495 355 ntTSL 3 BASIC5.11□□□□□ -1.59
COL3A1P02461 CYB5AP5-201ENST00000549779 389 ntBASIC5.11□□□□□ -1.59
COL3A1P02461 LINC02461-201ENST00000553211 836 ntTSL 3 BASIC5.11□□□□□ -1.59
COL3A1P02461 DISC1FP1-202ENST00000562245 774 ntTSL 3 BASIC5.11□□□□□ -1.59
COL3A1P02461 AL590229.1-201ENST00000603497 542 ntBASIC5.11□□□□□ -1.59
COL3A1P02461 AL137849.1-201ENST00000604767 169 ntBASIC5.11□□□□□ -1.59
COL3A1P02461 AC007349.4-201ENST00000608114 532 ntBASIC5.11□□□□□ -1.59
COL3A1P02461 AC109347.2-201ENST00000610220 349 ntBASIC5.11□□□□□ -1.59
COL3A1P02461 AC005344.1-201ENST00000613391 459 ntBASIC5.11□□□□□ -1.59
COL3A1P02461 AL354976.1-201ENST00000613843 387 ntBASIC5.11□□□□□ -1.59
COL3A1P02461 Z69908.1-201ENST00000622603 247 ntBASIC5.11□□□□□ -1.59
COL3A1P02461 AL158835.3-201ENST00000625908 565 ntTSL 5 BASIC5.11□□□□□ -1.59
COL3A1P02461 DMXL2-203ENST00000543779 10400 ntAPPRIS ALT2 TSL 1 (best) BASIC5.11□□□□□ -1.59
COL3A1P02461 NOX4-205ENST00000424319 4184 ntTSL 5 BASIC5.11□□□□□ -1.59
COL3A1P02461 IPCEF1-210ENST00000519344 1621 ntAPPRIS ALT2 TSL 5 BASIC5.11□□□□□ -1.59
COL3A1P02461 MYCBP2-211ENST00000544440 14664 ntAPPRIS P1 TSL 1 (best) BASIC5.1□□□□□ -1.59
COL3A1P02461 AC005832.2-201ENST00000538921 1430 ntBASIC5.1□□□□□ -1.59
COL3A1P02461 MUC2-202ENST00000613187 4845 ntBASIC5.1□□□□□ -1.59
COL3A1P02461 DDX18P6-201ENST00000450119 1997 ntBASIC5.1□□□□□ -1.59
COL3A1P02461 MIR421-201ENST00000365696 85 ntBASIC5.1□□□□□ -1.59
COL3A1P02461 OR13C3-201ENST00000374781 1108 ntBASIC5.1□□□□□ -1.59
COL3A1P02461 RNU6-517P-201ENST00000384362 110 ntBASIC5.1□□□□□ -1.59
COL3A1P02461 RNU4-22P-201ENST00000411058 166 ntBASIC5.1□□□□□ -1.59
COL3A1P02461 AC013286.1-201ENST00000412137 381 ntTSL 5 BASIC5.1□□□□□ -1.59
COL3A1P02461 RAP1BP1-201ENST00000412709 553 ntBASIC5.1□□□□□ -1.59
COL3A1P02461 AL008987.1-201ENST00000415528 237 ntBASIC5.1□□□□□ -1.59
COL3A1P02461 AC016831.2-201ENST00000417179 352 ntBASIC5.1□□□□□ -1.59
COL3A1P02461 AL589946.1-201ENST00000421465 420 ntTSL 3 BASIC5.1□□□□□ -1.59
COL3A1P02461 AC006366.1-201ENST00000422002 759 ntBASIC5.1□□□□□ -1.59
COL3A1P02461 LINC02238-201ENST00000424953 557 ntTSL 5 BASIC5.1□□□□□ -1.59
COL3A1P02461 AL138775.1-201ENST00000429539 575 ntTSL 1 (best) BASIC5.1□□□□□ -1.59
COL3A1P02461 TMSB4X-204ENST00000451311 628 ntAPPRIS P1 TSL 1 (best) BASIC5.1□□□□□ -1.59
COL3A1P02461 LINC01201-202ENST00000451431 401 ntTSL 3 BASIC5.1□□□□□ -1.59
COL3A1P02461 RPS27AP8-201ENST00000452665 445 ntBASIC5.1□□□□□ -1.59
COL3A1P02461 AP002345.1-201ENST00000456493 928 ntBASIC5.1□□□□□ -1.59
COL3A1P02461 AC104689.1-201ENST00000473356 768 ntBASIC5.1□□□□□ -1.59
COL3A1P02461 MTND3P7-201ENST00000474435 343 ntBASIC5.1□□□□□ -1.59
COL3A1P02461 AC108748.1-201ENST00000487772 515 ntTSL 3 BASIC5.1□□□□□ -1.59
COL3A1P02461 ZCCHC10-207ENST00000509437 1070 ntAPPRIS ALT2 TSL 1 (best) BASIC5.1□□□□□ -1.59
COL3A1P02461 AC012055.1-201ENST00000511346 1144 ntTSL 3 BASIC5.1□□□□□ -1.59
COL3A1P02461 AC097535.1-201ENST00000515263 332 ntTSL 3 BASIC5.1□□□□□ -1.59
COL3A1P02461 AC025437.2-201ENST00000518103 548 ntTSL 4 BASIC5.1□□□□□ -1.59
COL3A1P02461 TRMT10BP1-201ENST00000519377 943 ntBASIC5.1□□□□□ -1.59
COL3A1P02461 ZFPM2-AS1-204ENST00000520433 748 ntTSL 3 BASIC5.1□□□□□ -1.59
COL3A1P02461 OR4A2P-201ENST00000527276 913 ntBASIC5.1□□□□□ -1.59
COL3A1P02461 AC073172.2-201ENST00000527770 571 ntTSL 4 BASIC5.1□□□□□ -1.59
COL3A1P02461 CCNG2P1-201ENST00000549521 1000 ntBASIC5.1□□□□□ -1.59
COL3A1P02461 AL133166.1-201ENST00000551040 1034 ntTSL 4 BASIC5.1□□□□□ -1.59
COL3A1P02461 AC087897.2-201ENST00000552639 678 ntTSL 1 (best) BASIC5.1□□□□□ -1.59
COL3A1P02461 PSMA4-206ENST00000558341 719 ntTSL 5 BASIC5.1□□□□□ -1.59
COL3A1P02461 AC012170.3-201ENST00000560159 297 ntTSL 2 BASIC5.1□□□□□ -1.59
COL3A1P02461 AC091135.1-201ENST00000585943 307 ntBASIC5.1□□□□□ -1.59
COL3A1P02461 AC024220.1-201ENST00000603675 484 ntBASIC5.1□□□□□ -1.59
COL3A1P02461 AP003973.1-201ENST00000604639 691 ntBASIC5.1□□□□□ -1.59
COL3A1P02461 AC079610.2-201ENST00000604818 690 ntBASIC5.1□□□□□ -1.59
COL3A1P02461 SNORA62.6-201ENST00000606322 83 ntBASIC5.1□□□□□ -1.59
COL3A1P02461 AC128687.2-201ENST00000609657 566 ntBASIC5.1□□□□□ -1.59
COL3A1P02461 AC018755.4-201ENST00000619715 454 ntBASIC5.1□□□□□ -1.59
COL3A1P02461 OR51F1-202ENST00000624103 939 ntAPPRIS ALT1 BASIC5.1□□□□□ -1.59
COL3A1P02461 AL359740.1-201ENST00000624340 592 ntBASIC5.1□□□□□ -1.59
COL3A1P02461 MIR1322-201ENST00000638013 71 ntBASIC5.1□□□□□ -1.59
COL3A1P02461 OR13C3-202ENST00000641090 1108 ntAPPRIS P1 BASIC5.1□□□□□ -1.59
COL3A1P02461 AC079160.1-202ENST00000508406 2795 ntTSL 5 BASIC5.1□□□□□ -1.59
COL3A1P02461 AC139426.3-201ENST00000605648 2059 ntBASIC5.1□□□□□ -1.59
COL3A1P02461 AF127577.4-201ENST00000432230 5929 ntTSL 5 BASIC5.1□□□□□ -1.59
COL3A1P02461 AL365214.2-201ENST00000433684 1365 ntTSL 2 BASIC5.1□□□□□ -1.59
COL3A1P02461 PLD1-203ENST00000356327 5855 ntAPPRIS P1 TSL 1 (best) BASIC5.1□□□□□ -1.59
COL3A1P02461 ZNF117-201ENST00000282869 9080 ntAPPRIS P1 TSL 1 (best) BASIC5.09□□□□□ -1.59
COL3A1P02461 ZNF33A-201ENST00000307441 6196 ntAPPRIS ALT2 TSL 4 BASIC5.09□□□□□ -1.59
COL3A1P02461 LRMP-201ENST00000354454 2504 ntAPPRIS P2 TSL 1 (best) BASIC5.09□□□□□ -1.59
COL3A1P02461 LINC00504-201ENST00000505089 4672 ntTSL 2 BASIC5.09□□□□□ -1.59
COL3A1P02461 DEFB112-201ENST00000322246 342 ntAPPRIS P1 TSL 1 (best) BASIC5.09□□□□□ -1.59
COL3A1P02461 MIR554-201ENST00000384874 96 ntBASIC5.09□□□□□ -1.59
COL3A1P02461 Z85994.1-201ENST00000406912 606 ntTSL 2 BASIC5.09□□□□□ -1.59
COL3A1P02461 RNU6ATAC-201ENST00000408749 126 ntBASIC5.09□□□□□ -1.59
Retrieved 100 of 98,524 protein–RNA pairs in 114.4 ms