Protein–RNA interactions for Protein: Q9Y2E6

DTX4, E3 ubiquitin-protein ligase DTX4, humanhuman

Predictions only

Length 619 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DTX4Q9Y2E6 AL590240.1-201ENST00000334118 313 ntBASIC4.39□□□□□ -1.71
DTX4Q9Y2E6 Y_RNA.77-201ENST00000362962 107 ntBASIC4.39□□□□□ -1.71
DTX4Q9Y2E6 Y_RNA.201-201ENST00000364052 96 ntBASIC4.39□□□□□ -1.71
DTX4Q9Y2E6 CUBN-201ENST00000377823 705 ntTSL 3 BASIC4.39□□□□□ -1.71
DTX4Q9Y2E6 AL590762.2-201ENST00000395798 571 ntBASIC4.39□□□□□ -1.71
DTX4Q9Y2E6 RPL23AP29-201ENST00000397284 453 ntBASIC4.39□□□□□ -1.71
DTX4Q9Y2E6 CYCSP45-201ENST00000402289 315 ntBASIC4.39□□□□□ -1.71
DTX4Q9Y2E6 MEIG1-202ENST00000407572 625 ntAPPRIS P1 TSL 2 BASIC4.39□□□□□ -1.71
DTX4Q9Y2E6 SNX10-204ENST00000409838 944 ntTSL 1 (best) BASIC4.39□□□□□ -1.71
DTX4Q9Y2E6 RPL36P19-201ENST00000430744 301 ntBASIC4.39□□□□□ -1.71
DTX4Q9Y2E6 TRIM60P3Y-201ENST00000432201 673 ntBASIC4.39□□□□□ -1.71
DTX4Q9Y2E6 AP000477.1-202ENST00000434859 847 ntTSL 3 BASIC4.39□□□□□ -1.71
DTX4Q9Y2E6 MTCO2P16-201ENST00000436962 677 ntBASIC4.39□□□□□ -1.71
DTX4Q9Y2E6 LIX1L-AS1-204ENST00000437207 222 ntTSL 5 BASIC4.39□□□□□ -1.71
DTX4Q9Y2E6 AC004938.1-201ENST00000438468 308 ntBASIC4.39□□□□□ -1.71
DTX4Q9Y2E6 KCND3-IT1-201ENST00000439736 376 ntTSL 3 BASIC4.39□□□□□ -1.71
DTX4Q9Y2E6 AC073648.4-201ENST00000442655 781 ntBASIC4.39□□□□□ -1.71
DTX4Q9Y2E6 KRTAP21-3-201ENST00000444335 253 ntAPPRIS P1 BASIC4.39□□□□□ -1.71
DTX4Q9Y2E6 AC099342.1-201ENST00000446399 1124 ntTSL 3 BASIC4.39□□□□□ -1.71
DTX4Q9Y2E6 MTCO2P7-201ENST00000446518 666 ntBASIC4.39□□□□□ -1.71
DTX4Q9Y2E6 AL121877.1-201ENST00000453704 622 ntBASIC4.39□□□□□ -1.71
DTX4Q9Y2E6 APOA2-207ENST00000470459 416 ntTSL 5 BASIC4.39□□□□□ -1.71
DTX4Q9Y2E6 RAP1BP2-201ENST00000478270 544 ntBASIC4.39□□□□□ -1.71
DTX4Q9Y2E6 EIF4E-208ENST00000505992 898 ntTSL 5 BASIC4.39□□□□□ -1.71
DTX4Q9Y2E6 RNU6-583P-201ENST00000516012 92 ntBASIC4.39□□□□□ -1.71
DTX4Q9Y2E6 RNU1-6P-201ENST00000516290 144 ntBASIC4.39□□□□□ -1.71
DTX4Q9Y2E6 AC090281.1-201ENST00000523019 276 ntBASIC4.39□□□□□ -1.71
DTX4Q9Y2E6 AP003400.1-201ENST00000528319 231 ntTSL 5 BASIC4.39□□□□□ -1.71
DTX4Q9Y2E6 AP000790.1-201ENST00000528891 737 ntBASIC4.39□□□□□ -1.71
DTX4Q9Y2E6 AC068789.1-201ENST00000547942 577 ntTSL 2 BASIC4.39□□□□□ -1.71
DTX4Q9Y2E6 AC087311.2-201ENST00000549660 320 ntTSL 4 BASIC4.39□□□□□ -1.71
DTX4Q9Y2E6 AL450442.1-201ENST00000554042 854 ntTSL 1 (best) BASIC4.39□□□□□ -1.71
DTX4Q9Y2E6 DNAL1-205ENST00000554339 548 ntTSL 5 BASIC4.39□□□□□ -1.71
DTX4Q9Y2E6 LINC01491-201ENST00000558434 505 ntTSL 3 BASIC4.39□□□□□ -1.71
DTX4Q9Y2E6 AC011260.1-201ENST00000578420 472 ntBASIC4.39□□□□□ -1.71
DTX4Q9Y2E6 AC091042.1-201ENST00000579213 173 ntBASIC4.39□□□□□ -1.71
DTX4Q9Y2E6 AC107982.3-201ENST00000584957 985 ntBASIC4.39□□□□□ -1.71
DTX4Q9Y2E6 RPL27-207ENST00000590864 569 ntTSL 2 BASIC4.39□□□□□ -1.71
DTX4Q9Y2E6 AC004987.4-201ENST00000603383 338 ntBASIC4.39□□□□□ -1.71
DTX4Q9Y2E6 AC093765.1-201ENST00000603758 881 ntBASIC4.39□□□□□ -1.71
DTX4Q9Y2E6 SNORD91B-202ENST00000608459 222 ntBASIC4.39□□□□□ -1.71
DTX4Q9Y2E6 MIR6820-201ENST00000611508 62 ntBASIC4.39□□□□□ -1.71
DTX4Q9Y2E6 AC026585.1-201ENST00000619582 524 ntBASIC4.39□□□□□ -1.71
DTX4Q9Y2E6 AC127502.3-201ENST00000636170 1206 ntBASIC4.39□□□□□ -1.71
DTX4Q9Y2E6 TMEM71-201ENST00000356838 1993 ntAPPRIS P3 TSL 1 (best) BASIC4.39□□□□□ -1.71
DTX4Q9Y2E6 TMEM71-210ENST00000523829 1974 ntAPPRIS ALT2 TSL 5 BASIC4.39□□□□□ -1.71
DTX4Q9Y2E6 KLF12-201ENST00000377669 10637 ntAPPRIS P1 TSL 1 (best) BASIC4.39□□□□□ -1.71
DTX4Q9Y2E6 TCHHL1-201ENST00000368806 3603 ntAPPRIS P1 TSL 1 (best) BASIC4.39□□□□□ -1.71
DTX4Q9Y2E6 RGS13-201ENST00000391995 1505 ntAPPRIS P1 TSL 1 (best) BASIC4.39□□□□□ -1.71
DTX4Q9Y2E6 AFTPH-205ENST00000422803 1525 ntTSL 5 BASIC4.39□□□□□ -1.71
DTX4Q9Y2E6 TPTE2-205ENST00000400230 1793 ntAPPRIS P1 TSL 5 BASIC4.39□□□□□ -1.71
DTX4Q9Y2E6 HERC4-204ENST00000395198 4445 ntAPPRIS ALT1 TSL 1 (best) BASIC4.39□□□□□ -1.71
DTX4Q9Y2E6 LRP6-201ENST00000261349 10020 ntAPPRIS P1 TSL 1 (best) BASIC4.39□□□□□ -1.71
DTX4Q9Y2E6 ASB5-201ENST00000296525 3031 ntAPPRIS P1 TSL 1 (best) BASIC4.39□□□□□ -1.71
DTX4Q9Y2E6 PMCHL2-201ENST00000415808 1841 ntTSL 1 (best) BASIC4.39□□□□□ -1.71
DTX4Q9Y2E6 U2SURP-208ENST00000473835 7276 ntAPPRIS P1 TSL 1 (best) BASIC4.38□□□□□ -1.71
DTX4Q9Y2E6 AC007529.1-201ENST00000418574 2178 ntBASIC4.38□□□□□ -1.71
DTX4Q9Y2E6 ACKR4-201ENST00000249887 1914 ntAPPRIS P1 TSL 1 (best) BASIC4.38□□□□□ -1.71
DTX4Q9Y2E6 AC064875.1-201ENST00000425974 1942 ntTSL 2 BASIC4.38□□□□□ -1.71
DTX4Q9Y2E6 ZNF117-201ENST00000282869 9080 ntAPPRIS P1 TSL 1 (best) BASIC4.38□□□□□ -1.71
DTX4Q9Y2E6 ELSPBP1-201ENST00000339841 1052 ntAPPRIS P2 TSL 1 (best) BASIC4.38□□□□□ -1.71
DTX4Q9Y2E6 Y_RNA.51-201ENST00000362725 102 ntBASIC4.38□□□□□ -1.71
DTX4Q9Y2E6 RNU6-657P-201ENST00000383904 107 ntBASIC4.38□□□□□ -1.71
DTX4Q9Y2E6 RNU6-441P-201ENST00000384545 106 ntBASIC4.38□□□□□ -1.71
DTX4Q9Y2E6 MT-TH-201ENST00000387441 69 ntBASIC4.38□□□□□ -1.71
DTX4Q9Y2E6 TRGV8-201ENST00000390343 468 ntAPPRIS P1 BASIC4.38□□□□□ -1.71
DTX4Q9Y2E6 GLS-204ENST00000409428 816 ntTSL 2 BASIC4.38□□□□□ -1.71
DTX4Q9Y2E6 AC073264.1-201ENST00000411508 416 ntBASIC4.38□□□□□ -1.71
DTX4Q9Y2E6 AF240627.1-201ENST00000416002 879 ntTSL 3 BASIC4.38□□□□□ -1.71
DTX4Q9Y2E6 LINC01198-201ENST00000416521 500 ntTSL 3 BASIC4.38□□□□□ -1.71
DTX4Q9Y2E6 BX510359.2-201ENST00000417920 305 ntBASIC4.38□□□□□ -1.71
DTX4Q9Y2E6 AL359081.1-201ENST00000432083 615 ntTSL 2 BASIC4.38□□□□□ -1.71
DTX4Q9Y2E6 MTCO1P48-201ENST00000448024 1096 ntBASIC4.38□□□□□ -1.71
DTX4Q9Y2E6 OR6C5P-201ENST00000452388 923 ntBASIC4.38□□□□□ -1.71
DTX4Q9Y2E6 AC073359.1-201ENST00000486545 521 ntTSL 2 BASIC4.38□□□□□ -1.71
DTX4Q9Y2E6 PDCD10-214ENST00000487947 716 ntTSL 5 BASIC4.38□□□□□ -1.71
DTX4Q9Y2E6 AC020890.1-201ENST00000491837 504 ntBASIC4.38□□□□□ -1.71
DTX4Q9Y2E6 AC108078.3-201ENST00000502633 489 ntBASIC4.38□□□□□ -1.71
DTX4Q9Y2E6 HTN1-204ENST00000511674 623 ntAPPRIS P1 TSL 2 BASIC4.38□□□□□ -1.71
DTX4Q9Y2E6 RN7SKP46-201ENST00000515942 234 ntBASIC4.38□□□□□ -1.71
DTX4Q9Y2E6 AC011377.1-201ENST00000517708 275 ntTSL 3 BASIC4.38□□□□□ -1.71
DTX4Q9Y2E6 AC134043.1-201ENST00000521204 638 ntTSL 3 BASIC4.38□□□□□ -1.71
DTX4Q9Y2E6 AC103952.1-201ENST00000521872 590 ntTSL 3 BASIC4.38□□□□□ -1.71
DTX4Q9Y2E6 AC011363.1-201ENST00000524198 458 ntTSL 5 BASIC4.38□□□□□ -1.71
DTX4Q9Y2E6 AC084083.1-201ENST00000526947 722 ntTSL 5 BASIC4.38□□□□□ -1.71
DTX4Q9Y2E6 AP003033.1-201ENST00000527244 415 ntBASIC4.38□□□□□ -1.71
DTX4Q9Y2E6 AP003730.2-202ENST00000527281 774 ntTSL 3 BASIC4.38□□□□□ -1.71
DTX4Q9Y2E6 SNHG1-217ENST00000541578 588 ntTSL 3 BASIC4.38□□□□□ -1.71
DTX4Q9Y2E6 GABARAPL1-212ENST00000543602 653 ntTSL 5 BASIC4.38□□□□□ -1.71
DTX4Q9Y2E6 AC023161.2-201ENST00000551218 780 ntBASIC4.38□□□□□ -1.71
DTX4Q9Y2E6 AL110118.1-201ENST00000553543 400 ntBASIC4.38□□□□□ -1.71
DTX4Q9Y2E6 LINC01491-202ENST00000558792 439 ntTSL 3 BASIC4.38□□□□□ -1.71
DTX4Q9Y2E6 LINC02490-201ENST00000559915 601 ntTSL 3 BASIC4.38□□□□□ -1.71
DTX4Q9Y2E6 AC012170.2-201ENST00000560380 667 ntTSL 3 BASIC4.38□□□□□ -1.71
DTX4Q9Y2E6 AC068875.1-201ENST00000561054 463 ntTSL 3 BASIC4.38□□□□□ -1.71
DTX4Q9Y2E6 ITFG1-AS1-202ENST00000565694 494 ntTSL 2 BASIC4.38□□□□□ -1.71
DTX4Q9Y2E6 AC025917.1-202ENST00000566344 635 ntTSL 5 BASIC4.38□□□□□ -1.71
DTX4Q9Y2E6 AC037487.4-201ENST00000577423 625 ntTSL 3 BASIC4.38□□□□□ -1.71
DTX4Q9Y2E6 AL031985.2-201ENST00000600955 480 ntBASIC4.38□□□□□ -1.71
DTX4Q9Y2E6 AL355512.1-201ENST00000609514 488 ntTSL 5 BASIC4.38□□□□□ -1.71
Retrieved 100 of 98,524 protein–RNA pairs in 70.8 ms