Protein–RNA interactions for Protein: Q9NZQ3

NCKIPSD, NCK-interacting protein with SH3 domain, humanhuman

Predictions only

Length 722 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NCKIPSDQ9NZQ3 AC025265.1-201ENST00000551299 497 ntTSL 3 BASIC4.55□□□□□ -1.68
NCKIPSDQ9NZQ3 LINC02345-201ENST00000557883 766 ntTSL 3 BASIC4.55□□□□□ -1.68
NCKIPSDQ9NZQ3 HYKK-203ENST00000563233 734 ntTSL 2 BASIC4.55□□□□□ -1.68
NCKIPSDQ9NZQ3 MIR3912-201ENST00000577566 105 ntBASIC4.55□□□□□ -1.68
NCKIPSDQ9NZQ3 AC017100.2-201ENST00000584628 355 ntBASIC4.55□□□□□ -1.68
NCKIPSDQ9NZQ3 AC008759.1-201ENST00000589783 983 ntBASIC4.55□□□□□ -1.68
NCKIPSDQ9NZQ3 AC092296.3-201ENST00000589968 249 ntTSL 3 BASIC4.55□□□□□ -1.68
NCKIPSDQ9NZQ3 AC008687.2-201ENST00000597865 520 ntBASIC4.55□□□□□ -1.68
NCKIPSDQ9NZQ3 AC011503.1-202ENST00000598914 919 ntTSL 2 BASIC4.55□□□□□ -1.68
NCKIPSDQ9NZQ3 AC098617.1-216ENST00000602099 708 ntTSL 5 BASIC4.55□□□□□ -1.68
NCKIPSDQ9NZQ3 MRPS35P3-201ENST00000603189 709 ntBASIC4.55□□□□□ -1.68
NCKIPSDQ9NZQ3 5S_rRNA.16-201ENST00000612928 119 ntBASIC4.55□□□□□ -1.68
NCKIPSDQ9NZQ3 AC011939.3-201ENST00000613686 466 ntBASIC4.55□□□□□ -1.68
NCKIPSDQ9NZQ3 MLECP1-201ENST00000615893 709 ntBASIC4.55□□□□□ -1.68
NCKIPSDQ9NZQ3 AC243756.2-201ENST00000618406 463 ntBASIC4.55□□□□□ -1.68
NCKIPSDQ9NZQ3 AC124312.6-202ENST00000623624 418 ntBASIC4.55□□□□□ -1.68
NCKIPSDQ9NZQ3 OR8B1P-202ENST00000641132 1178 ntBASIC4.55□□□□□ -1.68
NCKIPSDQ9NZQ3 MAP3K19-201ENST00000358371 3719 ntTSL 1 (best) BASIC4.55□□□□□ -1.68
NCKIPSDQ9NZQ3 GTF2H1-204ENST00000524753 1510 ntTSL 3 BASIC4.55□□□□□ -1.68
NCKIPSDQ9NZQ3 CCNT2-201ENST00000264157 6917 ntAPPRIS P1 TSL 1 (best) BASIC4.55□□□□□ -1.68
NCKIPSDQ9NZQ3 AP005901.5-201ENST00000545779 1796 ntBASIC4.55□□□□□ -1.68
NCKIPSDQ9NZQ3 FAM169A-203ENST00000510496 5810 ntTSL 5 BASIC4.55□□□□□ -1.68
NCKIPSDQ9NZQ3 APC-207ENST00000508376 10619 ntAPPRIS P1 TSL 1 (best) BASIC4.55□□□□□ -1.68
NCKIPSDQ9NZQ3 SYTL2-213ENST00000525702 2727 ntTSL 1 (best) BASIC4.54□□□□□ -1.68
NCKIPSDQ9NZQ3 GHR-202ENST00000357703 4316 ntTSL 5 BASIC4.54□□□□□ -1.68
NCKIPSDQ9NZQ3 ALG14-201ENST00000370205 9367 ntAPPRIS P1 TSL 1 (best) BASIC4.54□□□□□ -1.68
NCKIPSDQ9NZQ3 NFIB-203ENST00000380934 2142 ntTSL 2 BASIC4.54□□□□□ -1.68
NCKIPSDQ9NZQ3 SLC30A6-205ENST00000435660 4776 ntTSL 1 (best) BASIC4.54□□□□□ -1.68
NCKIPSDQ9NZQ3 DCAF13P3-201ENST00000561147 1334 ntBASIC4.54□□□□□ -1.68
NCKIPSDQ9NZQ3 LGI1-228ENST00000637689 1802 ntTSL 5 BASIC4.54□□□□□ -1.68
NCKIPSDQ9NZQ3 SCN1A-202ENST00000375405 8097 ntAPPRIS P3 TSL 5 BASIC4.54□□□□□ -1.68
NCKIPSDQ9NZQ3 PRIM2-202ENST00000370687 909 ntTSL 3 BASIC4.54□□□□□ -1.68
NCKIPSDQ9NZQ3 U3.22-201ENST00000391120 215 ntBASIC4.54□□□□□ -1.68
NCKIPSDQ9NZQ3 AL590867.1-201ENST00000392385 1212 ntTSL 2 BASIC4.54□□□□□ -1.68
NCKIPSDQ9NZQ3 RNU4-25P-201ENST00000410569 230 ntBASIC4.54□□□□□ -1.68
NCKIPSDQ9NZQ3 LINC02263-202ENST00000420701 597 ntTSL 5 BASIC4.54□□□□□ -1.68
NCKIPSDQ9NZQ3 CHIAP3-201ENST00000423668 1133 ntBASIC4.54□□□□□ -1.68
NCKIPSDQ9NZQ3 GTF2IP23-201ENST00000423746 351 ntBASIC4.54□□□□□ -1.68
NCKIPSDQ9NZQ3 AL593851.1-201ENST00000426171 157 ntBASIC4.54□□□□□ -1.68
NCKIPSDQ9NZQ3 RPL23AP25-201ENST00000430973 463 ntBASIC4.54□□□□□ -1.68
NCKIPSDQ9NZQ3 AL161935.3-201ENST00000433770 347 ntTSL 2 BASIC4.54□□□□□ -1.68
NCKIPSDQ9NZQ3 PTMAP3-201ENST00000447474 330 ntBASIC4.54□□□□□ -1.68
NCKIPSDQ9NZQ3 AC079776.3-201ENST00000450665 370 ntBASIC4.54□□□□□ -1.68
NCKIPSDQ9NZQ3 LINC01813-201ENST00000451034 712 ntTSL 1 (best) BASIC4.54□□□□□ -1.68
NCKIPSDQ9NZQ3 RPS27AP8-201ENST00000452665 445 ntBASIC4.54□□□□□ -1.68
NCKIPSDQ9NZQ3 ANKRD26P4-201ENST00000455755 950 ntBASIC4.54□□□□□ -1.68
NCKIPSDQ9NZQ3 SCEL-AS1-201ENST00000456280 493 ntTSL 3 BASIC4.54□□□□□ -1.68
NCKIPSDQ9NZQ3 AL133477.1-201ENST00000457472 514 ntBASIC4.54□□□□□ -1.68
NCKIPSDQ9NZQ3 AL049548.1-201ENST00000458194 385 ntTSL 2 BASIC4.54□□□□□ -1.68
NCKIPSDQ9NZQ3 AC103987.1-201ENST00000473394 348 ntBASIC4.54□□□□□ -1.68
NCKIPSDQ9NZQ3 OR2A20P-203ENST00000498397 1268 ntBASIC4.54□□□□□ -1.68
NCKIPSDQ9NZQ3 FTH1P24-201ENST00000503502 462 ntBASIC4.54□□□□□ -1.68
NCKIPSDQ9NZQ3 AC108935.1-201ENST00000504874 518 ntTSL 2 BASIC4.54□□□□□ -1.68
NCKIPSDQ9NZQ3 STPG2-AS1-201ENST00000508933 537 ntTSL 4 BASIC4.54□□□□□ -1.68
NCKIPSDQ9NZQ3 HMGB3P13-201ENST00000511263 607 ntBASIC4.54□□□□□ -1.68
NCKIPSDQ9NZQ3 CDV3-208ENST00000511392 554 ntTSL 5 BASIC4.54□□□□□ -1.68
NCKIPSDQ9NZQ3 AC097103.1-201ENST00000512398 273 ntTSL 3 BASIC4.54□□□□□ -1.68
NCKIPSDQ9NZQ3 NDUFB4P12-201ENST00000513465 390 ntBASIC4.54□□□□□ -1.68
NCKIPSDQ9NZQ3 RNU6-202P-201ENST00000515998 96 ntBASIC4.54□□□□□ -1.68
NCKIPSDQ9NZQ3 MYL12AP1-201ENST00000518490 515 ntBASIC4.54□□□□□ -1.68
NCKIPSDQ9NZQ3 SKP1-210ENST00000522855 802 ntAPPRIS P4 TSL 2 BASIC4.54□□□□□ -1.68
NCKIPSDQ9NZQ3 AP000827.1-201ENST00000527814 258 ntBASIC4.54□□□□□ -1.68
NCKIPSDQ9NZQ3 TEX12-202ENST00000530752 787 ntAPPRIS P1 TSL 1 (best) BASIC4.54□□□□□ -1.68
NCKIPSDQ9NZQ3 AP001781.1-201ENST00000530977 207 ntBASIC4.54□□□□□ -1.68
NCKIPSDQ9NZQ3 LINC01493-203ENST00000534756 509 ntTSL 3 BASIC4.54□□□□□ -1.68
NCKIPSDQ9NZQ3 PLCZ1-203ENST00000534932 525 ntTSL 4 BASIC4.54□□□□□ -1.68
NCKIPSDQ9NZQ3 AC004801.3-201ENST00000547602 962 ntTSL 1 (best) BASIC4.54□□□□□ -1.68
NCKIPSDQ9NZQ3 AC010198.2-201ENST00000550612 259 ntBASIC4.54□□□□□ -1.68
NCKIPSDQ9NZQ3 NBEAP1-201ENST00000554452 979 ntBASIC4.54□□□□□ -1.68
NCKIPSDQ9NZQ3 MIR4716-201ENST00000579628 84 ntBASIC4.54□□□□□ -1.68
NCKIPSDQ9NZQ3 LINC01899-203ENST00000584810 337 ntTSL 2 BASIC4.54□□□□□ -1.68
NCKIPSDQ9NZQ3 PSMD5-AS1-203ENST00000589026 525 ntTSL 5 BASIC4.54□□□□□ -1.68
NCKIPSDQ9NZQ3 AC073091.2-201ENST00000603205 907 ntBASIC4.54□□□□□ -1.68
NCKIPSDQ9NZQ3 AL590392.1-201ENST00000604960 446 ntBASIC4.54□□□□□ -1.68
NCKIPSDQ9NZQ3 AC005962.2-201ENST00000611427 652 ntBASIC4.54□□□□□ -1.68
NCKIPSDQ9NZQ3 AC098679.4-201ENST00000624241 654 ntBASIC4.54□□□□□ -1.68
NCKIPSDQ9NZQ3 AC055839.1-201ENST00000634467 498 ntBASIC4.54□□□□□ -1.68
NCKIPSDQ9NZQ3 ZNF780B-202ENST00000434248 8665 ntAPPRIS P1 TSL 5 BASIC4.54□□□□□ -1.68
NCKIPSDQ9NZQ3 ZNF780B-207ENST00000617676 8664 ntAPPRIS P1 TSL 5 BASIC4.54□□□□□ -1.68
NCKIPSDQ9NZQ3 Z99496.1-201ENST00000469424 1477 ntBASIC4.54□□□□□ -1.68
NCKIPSDQ9NZQ3 AL390862.1-201ENST00000635467 1469 ntBASIC4.54□□□□□ -1.68
NCKIPSDQ9NZQ3 SUPT16HP1-201ENST00000537175 3133 ntBASIC4.54□□□□□ -1.68
NCKIPSDQ9NZQ3 AC135352.1-201ENST00000506173 1418 ntBASIC4.54□□□□□ -1.68
NCKIPSDQ9NZQ3 AC021755.1-201ENST00000559747 1447 ntBASIC4.54□□□□□ -1.68
NCKIPSDQ9NZQ3 STK31-205ENST00000433467 3085 ntTSL 2 BASIC4.54□□□□□ -1.68
NCKIPSDQ9NZQ3 OR10K1-203ENST00000641432 3775 ntAPPRIS P1 BASIC4.54□□□□□ -1.68
NCKIPSDQ9NZQ3 C17orf78-204ENST00000615133 1862 ntAPPRIS P3 TSL 1 (best) BASIC4.54□□□□□ -1.68
NCKIPSDQ9NZQ3 AL391684.1-202ENST00000641293 1636 ntBASIC4.54□□□□□ -1.68
NCKIPSDQ9NZQ3 SLAIN2-205ENST00000512093 4219 ntTSL 5 BASIC4.53□□□□□ -1.68
NCKIPSDQ9NZQ3 NT5C3A-203ENST00000396152 1788 ntAPPRIS P3 TSL 1 (best) BASIC4.53□□□□□ -1.68
NCKIPSDQ9NZQ3 AFTPH-205ENST00000422803 1525 ntTSL 5 BASIC4.53□□□□□ -1.68
NCKIPSDQ9NZQ3 FAM3C2-201ENST00000312214 681 ntBASIC4.53□□□□□ -1.68
NCKIPSDQ9NZQ3 RNA5SP391-201ENST00000363456 119 ntBASIC4.53□□□□□ -1.68
NCKIPSDQ9NZQ3 RNA5SP509-201ENST00000364577 119 ntBASIC4.53□□□□□ -1.68
NCKIPSDQ9NZQ3 AL512430.2-201ENST00000406786 339 ntBASIC4.53□□□□□ -1.68
NCKIPSDQ9NZQ3 AL356387.2-201ENST00000422272 243 ntBASIC4.53□□□□□ -1.68
NCKIPSDQ9NZQ3 RPEP3-201ENST00000425462 676 ntBASIC4.53□□□□□ -1.68
NCKIPSDQ9NZQ3 TRIM60P3Y-201ENST00000432201 673 ntBASIC4.53□□□□□ -1.68
NCKIPSDQ9NZQ3 AC022537.1-201ENST00000435271 446 ntTSL 3 BASIC4.53□□□□□ -1.68
NCKIPSDQ9NZQ3 RPL23AP76-201ENST00000441860 458 ntBASIC4.53□□□□□ -1.68
Retrieved 100 of 98,524 protein–RNA pairs in 214.9 ms