Protein–RNA interactions for Protein: Q96PC3

AP1S3, AP-1 complex subunit sigma-3, humanhuman

Predictions only

Length 154 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP1S3Q96PC3 RNU6ATAC40P-201ENST00000408580 137 ntBASIC2.59□□□□□ -1.99
AP1S3Q96PC3 AL022329.2-201ENST00000413494 660 ntTSL 5 BASIC2.59□□□□□ -1.99
AP1S3Q96PC3 GAS5-208ENST00000425771 242 ntTSL 3 BASIC2.59□□□□□ -1.99
AP1S3Q96PC3 RPL23AP82-202ENST00000427528 469 ntBASIC2.59□□□□□ -1.99
AP1S3Q96PC3 AC007563.3-201ENST00000433233 371 ntBASIC2.59□□□□□ -1.99
AP1S3Q96PC3 LINC01688-201ENST00000435492 259 ntTSL 1 (best) BASIC2.59□□□□□ -1.99
AP1S3Q96PC3 LMO7DN-IT1-201ENST00000436872 321 ntTSL 3 BASIC2.59□□□□□ -1.99
AP1S3Q96PC3 HMGN2P20-201ENST00000437531 273 ntBASIC2.59□□□□□ -1.99
AP1S3Q96PC3 AC003092.1-202ENST00000438538 743 ntTSL 3 BASIC2.59□□□□□ -1.99
AP1S3Q96PC3 Z99127.1-202ENST00000448686 526 ntTSL 2 BASIC2.59□□□□□ -1.99
AP1S3Q96PC3 CENPBD1P1-201ENST00000464061 469 ntBASIC2.59□□□□□ -1.99
AP1S3Q96PC3 AC084357.1-201ENST00000473404 255 ntBASIC2.59□□□□□ -1.99
AP1S3Q96PC3 AC068724.1-201ENST00000487100 792 ntBASIC2.59□□□□□ -1.99
AP1S3Q96PC3 RPL23AP55-201ENST00000498163 452 ntBASIC2.59□□□□□ -1.99
AP1S3Q96PC3 SAR1B-204ENST00000502539 708 ntTSL 5 BASIC2.59□□□□□ -1.99
AP1S3Q96PC3 AC110792.2-201ENST00000510278 224 ntBASIC2.59□□□□□ -1.99
AP1S3Q96PC3 LINC02278-201ENST00000512170 500 ntTSL 5 BASIC2.59□□□□□ -1.99
AP1S3Q96PC3 AP006245.1-201ENST00000522549 120 ntBASIC2.59□□□□□ -1.99
AP1S3Q96PC3 PTS-202ENST00000524931 696 ntTSL 3 BASIC2.59□□□□□ -1.99
AP1S3Q96PC3 AP002768.1-201ENST00000526741 320 ntTSL 3 BASIC2.59□□□□□ -1.99
AP1S3Q96PC3 AC068389.4-201ENST00000531379 689 ntTSL 3 BASIC2.59□□□□□ -1.99
AP1S3Q96PC3 NAV2-AS3-201ENST00000534036 598 ntTSL 3 BASIC2.59□□□□□ -1.99
AP1S3Q96PC3 AC023796.1-201ENST00000536131 670 ntTSL 3 BASIC2.59□□□□□ -1.99
AP1S3Q96PC3 LINC02446-201ENST00000544591 868 ntTSL 2 BASIC2.59□□□□□ -1.99
AP1S3Q96PC3 LINC02463-201ENST00000546414 497 ntTSL 3 BASIC2.59□□□□□ -1.99
AP1S3Q96PC3 AC046158.1-201ENST00000563408 719 ntTSL 3 BASIC2.59□□□□□ -1.99
AP1S3Q96PC3 MTCO3P24-201ENST00000572729 782 ntBASIC2.59□□□□□ -1.99
AP1S3Q96PC3 AP005271.1-201ENST00000582470 412 ntTSL 3 BASIC2.59□□□□□ -1.99
AP1S3Q96PC3 MIR6867-201ENST00000610636 67 ntBASIC2.59□□□□□ -1.99
AP1S3Q96PC3 LINC01002-236ENST00000634022 378 ntTSL 5 BASIC2.59□□□□□ -1.99
AP1S3Q96PC3 OR9G4-203ENST00000641581 2603 ntAPPRIS P1 BASIC2.59□□□□□ -1.99
AP1S3Q96PC3 PIK3C2G-206ENST00000538779 4963 ntTSL 5 BASIC2.59□□□□□ -2
AP1S3Q96PC3 CADM2-AS1-201ENST00000476021 2656 ntTSL 1 (best) BASIC2.59□□□□□ -2
AP1S3Q96PC3 ERBIN-212ENST00000508515 4374 ntTSL 5 BASIC2.59□□□□□ -2
AP1S3Q96PC3 FCHO2-207ENST00000512348 2700 ntTSL 2 BASIC2.59□□□□□ -2
AP1S3Q96PC3 AC007656.2-201ENST00000624902 4547 ntBASIC2.59□□□□□ -2
AP1S3Q96PC3 ZNF483-201ENST00000309235 3655 ntAPPRIS P1 TSL 1 (best) BASIC2.58□□□□□ -2
AP1S3Q96PC3 POU1F1-202ENST00000350375 1491 ntAPPRIS P1 TSL 1 (best) BASIC2.58□□□□□ -2
AP1S3Q96PC3 HERC5-203ENST00000508159 2243 ntTSL 2 BASIC2.58□□□□□ -2
AP1S3Q96PC3 FIGNL1-203ENST00000419119 3700 ntAPPRIS P1 TSL 1 (best) BASIC2.58□□□□□ -2
AP1S3Q96PC3 EFTUD1P2-201ENST00000514817 1603 ntBASIC2.58□□□□□ -2
AP1S3Q96PC3 AL353743.1-202ENST00000431724 1695 ntBASIC2.58□□□□□ -2
AP1S3Q96PC3 PPBP-201ENST00000296028 715 ntAPPRIS P1 TSL 1 (best) BASIC2.58□□□□□ -2
AP1S3Q96PC3 UQCR10-201ENST00000330029 916 ntAPPRIS P1 TSL 1 (best) BASIC2.58□□□□□ -2
AP1S3Q96PC3 SNORA7.2-201ENST00000364446 145 ntBASIC2.58□□□□□ -2
AP1S3Q96PC3 KRTAP27-1-201ENST00000382835 682 ntAPPRIS P1 BASIC2.58□□□□□ -2
AP1S3Q96PC3 HMGB3P18-201ENST00000406327 590 ntBASIC2.58□□□□□ -2
AP1S3Q96PC3 AL031121.1-201ENST00000406553 254 ntBASIC2.58□□□□□ -2
AP1S3Q96PC3 MTND4P22-201ENST00000413116 1169 ntBASIC2.58□□□□□ -2
AP1S3Q96PC3 RANP4-201ENST00000413361 655 ntBASIC2.58□□□□□ -2
AP1S3Q96PC3 EI24P1-201ENST00000416584 867 ntBASIC2.58□□□□□ -2
AP1S3Q96PC3 CR769775.2-201ENST00000417850 891 ntTSL 3 BASIC2.58□□□□□ -2
AP1S3Q96PC3 RPA2P2-201ENST00000419698 796 ntBASIC2.58□□□□□ -2
AP1S3Q96PC3 AL031736.2-201ENST00000426573 787 ntBASIC2.58□□□□□ -2
AP1S3Q96PC3 AL731684.2-201ENST00000426839 333 ntTSL 5 BASIC2.58□□□□□ -2
AP1S3Q96PC3 HRH4-202ENST00000426880 909 ntTSL 1 (best) BASIC2.58□□□□□ -2
AP1S3Q96PC3 AL033504.1-201ENST00000427015 773 ntTSL 2 BASIC2.58□□□□□ -2
AP1S3Q96PC3 AC008065.1-201ENST00000428525 348 ntBASIC2.58□□□□□ -2
AP1S3Q96PC3 ELOCP11-201ENST00000436690 332 ntBASIC2.58□□□□□ -2
AP1S3Q96PC3 ELOCP16-201ENST00000444494 332 ntBASIC2.58□□□□□ -2
AP1S3Q96PC3 VPS29-202ENST00000447578 996 ntTSL 1 (best) BASIC2.58□□□□□ -2
AP1S3Q96PC3 VN1R48P-201ENST00000448149 1036 ntBASIC2.58□□□□□ -2
AP1S3Q96PC3 RPL7P52-201ENST00000449200 742 ntBASIC2.58□□□□□ -2
AP1S3Q96PC3 AC099794.1-201ENST00000450811 447 ntTSL 3 BASIC2.58□□□□□ -2
AP1S3Q96PC3 RPS7P7-201ENST00000463499 571 ntBASIC2.58□□□□□ -2
AP1S3Q96PC3 RPL7P19-201ENST00000469948 618 ntBASIC2.58□□□□□ -2
AP1S3Q96PC3 SETP14-201ENST00000497538 873 ntBASIC2.58□□□□□ -2
AP1S3Q96PC3 LINC02014-201ENST00000514010 713 ntTSL 3 BASIC2.58□□□□□ -2
AP1S3Q96PC3 LINC02374-202ENST00000515222 578 ntTSL 4 BASIC2.58□□□□□ -2
AP1S3Q96PC3 AC084116.2-201ENST00000520171 415 ntTSL 4 BASIC2.58□□□□□ -2
AP1S3Q96PC3 AC012413.1-201ENST00000521294 519 ntTSL 2 BASIC2.58□□□□□ -2
AP1S3Q96PC3 AB015752.1-201ENST00000521975 578 ntTSL 5 BASIC2.58□□□□□ -2
AP1S3Q96PC3 MED28P5-201ENST00000528254 438 ntBASIC2.58□□□□□ -2
AP1S3Q96PC3 STX3-204ENST00000530221 534 ntTSL 5 BASIC2.58□□□□□ -2
AP1S3Q96PC3 UTS2-201ENST00000054668 420 ntAPPRIS P4 TSL 1 (best) BASIC2.58□□□□□ -2
AP1S3Q96PC3 AC106028.2-201ENST00000555325 464 ntTSL 4 BASIC2.58□□□□□ -2
AP1S3Q96PC3 AC055876.1-202ENST00000567053 138 ntBASIC2.58□□□□□ -2
AP1S3Q96PC3 MIR3939-201ENST00000582614 106 ntBASIC2.58□□□□□ -2
AP1S3Q96PC3 RPS4XP16-203ENST00000596904 698 ntTSL 5 BASIC2.58□□□□□ -2
AP1S3Q96PC3 AL109653.1-201ENST00000603091 248 ntBASIC2.58□□□□□ -2
AP1S3Q96PC3 AC069304.3-201ENST00000603938 1084 ntBASIC2.58□□□□□ -2
AP1S3Q96PC3 AC016877.3-201ENST00000606778 504 ntBASIC2.58□□□□□ -2
AP1S3Q96PC3 RMST_5.1-201ENST00000618704 126 ntBASIC2.58□□□□□ -2
AP1S3Q96PC3 CR392039.4-201ENST00000624968 501 ntBASIC2.58□□□□□ -2
AP1S3Q96PC3 HDX-201ENST00000297977 6200 ntAPPRIS P1 TSL 1 (best) BASIC2.58□□□□□ -2
AP1S3Q96PC3 AC110774.1-201ENST00000623567 2018 ntBASIC2.58□□□□□ -2
AP1S3Q96PC3 CCDC30-203ENST00000428554 3063 ntAPPRIS P2 TSL 5 BASIC2.57□□□□□ -2
AP1S3Q96PC3 MAP3K7-202ENST00000369325 4633 ntTSL 1 (best) BASIC2.57□□□□□ -2
AP1S3Q96PC3 GPRC6A-202ENST00000368549 2622 ntTSL 1 (best) BASIC2.57□□□□□ -2
AP1S3Q96PC3 PLS3-203ENST00000420625 3150 ntTSL 5 BASIC2.57□□□□□ -2
AP1S3Q96PC3 MAPK6PS3-201ENST00000403865 2162 ntBASIC2.57□□□□□ -2
AP1S3Q96PC3 ARHGAP28-204ENST00000419673 5492 ntAPPRIS P2 TSL 1 (best) BASIC2.57□□□□□ -2
AP1S3Q96PC3 CEP290-202ENST00000397838 2421 ntTSL 5 BASIC2.57□□□□□ -2
AP1S3Q96PC3 IL1R1-204ENST00000409929 1858 ntTSL 1 (best) BASIC2.57□□□□□ -2
AP1S3Q96PC3 TSHB-201ENST00000256592 537 ntAPPRIS P1 TSL 5 BASIC2.57□□□□□ -2
AP1S3Q96PC3 U8.9-201ENST00000365667 134 ntBASIC2.57□□□□□ -2
AP1S3Q96PC3 CD2-201ENST00000369477 478 ntTSL 2 BASIC2.57□□□□□ -2
AP1S3Q96PC3 PRIM2-202ENST00000370687 909 ntTSL 3 BASIC2.57□□□□□ -2
AP1S3Q96PC3 AKAP14-202ENST00000371422 412 ntAPPRIS ALT2 TSL 1 (best) BASIC2.57□□□□□ -2
AP1S3Q96PC3 DFNB59-201ENST00000375129 1202 ntAPPRIS P1 TSL 1 (best) BASIC2.57□□□□□ -2
Retrieved 100 of 98,524 protein–RNA pairs in 77.9 ms