Protein–RNA interactions for Protein: Q96LT7

C9orf72, Guanine nucleotide exchange C9orf72, humanhuman

Predictions only

Length 481 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf72Q96LT7 CCDC58P3-201ENST00000590792 430 ntBASIC3.69□□□□□ -1.82
C9orf72Q96LT7 LINC01539-206ENST00000593282 678 ntTSL 4 BASIC3.69□□□□□ -1.82
C9orf72Q96LT7 PCNAP1-202ENST00000595299 752 ntBASIC3.69□□□□□ -1.82
C9orf72Q96LT7 AC003973.1-201ENST00000600071 546 ntTSL 4 BASIC3.69□□□□□ -1.82
C9orf72Q96LT7 AC012531.5-201ENST00000611375 151 ntBASIC3.69□□□□□ -1.82
C9orf72Q96LT7 AP000553.6-201ENST00000641242 118 ntBASIC3.69□□□□□ -1.82
C9orf72Q96LT7 GPR34-202ENST00000378142 1928 ntAPPRIS P1 TSL 1 (best) BASIC3.69□□□□□ -1.82
C9orf72Q96LT7 FNBP1L-206ENST00000604705 1830 ntAPPRIS ALT1 TSL 5 BASIC3.69□□□□□ -1.82
C9orf72Q96LT7 RAD51AP1-201ENST00000228843 2163 ntAPPRIS ALT2 TSL 1 (best) BASIC3.69□□□□□ -1.82
C9orf72Q96LT7 MFSD8-236ENST00000641509 4050 ntBASIC3.69□□□□□ -1.82
C9orf72Q96LT7 AGL-205ENST00000370163 7166 ntAPPRIS P1 TSL 1 (best) BASIC3.69□□□□□ -1.82
C9orf72Q96LT7 WNK3-205ENST00000620763 5400 ntTSL 5 BASIC3.69□□□□□ -1.82
C9orf72Q96LT7 FASTKD1-205ENST00000453929 2791 ntTSL 2 BASIC3.68□□□□□ -1.82
C9orf72Q96LT7 ADAT2-203ENST00000606514 6651 ntTSL 1 (best) BASIC3.68□□□□□ -1.82
C9orf72Q96LT7 RNU4-31P-201ENST00000384211 141 ntBASIC3.68□□□□□ -1.82
C9orf72Q96LT7 RPL21P17-201ENST00000397467 475 ntBASIC3.68□□□□□ -1.82
C9orf72Q96LT7 RN7SKP285-201ENST00000410137 318 ntBASIC3.68□□□□□ -1.82
C9orf72Q96LT7 MTND4P22-201ENST00000413116 1169 ntBASIC3.68□□□□□ -1.82
C9orf72Q96LT7 AC004022.2-201ENST00000413824 193 ntBASIC3.68□□□□□ -1.82
C9orf72Q96LT7 AC069157.1-201ENST00000421749 137 ntBASIC3.68□□□□□ -1.82
C9orf72Q96LT7 BBIP1-203ENST00000423273 492 ntTSL 1 (best) BASIC3.68□□□□□ -1.82
C9orf72Q96LT7 TRIM60P3Y-201ENST00000432201 673 ntBASIC3.68□□□□□ -1.82
C9orf72Q96LT7 LMO7DN-IT1-201ENST00000436872 321 ntTSL 3 BASIC3.68□□□□□ -1.82
C9orf72Q96LT7 AC107072.2-201ENST00000452412 555 ntTSL 3 BASIC3.68□□□□□ -1.82
C9orf72Q96LT7 AL136097.1-201ENST00000456945 913 ntBASIC3.68□□□□□ -1.82
C9orf72Q96LT7 CEACAMP4-201ENST00000457676 421 ntBASIC3.68□□□□□ -1.82
C9orf72Q96LT7 UBE2CP3-201ENST00000502715 450 ntBASIC3.68□□□□□ -1.82
C9orf72Q96LT7 LINC02146-201ENST00000504244 509 ntTSL 3 BASIC3.68□□□□□ -1.82
C9orf72Q96LT7 TMPRSS11BNL-205ENST00000514295 1262 ntBASIC3.68□□□□□ -1.82
C9orf72Q96LT7 LINC02382-201ENST00000515840 614 ntTSL 1 (best) BASIC3.68□□□□□ -1.82
C9orf72Q96LT7 IGKV2-23-201ENST00000518729 323 ntBASIC3.68□□□□□ -1.82
C9orf72Q96LT7 AC084116.2-201ENST00000520171 415 ntTSL 4 BASIC3.68□□□□□ -1.82
C9orf72Q96LT7 NECAB1-205ENST00000522820 811 ntTSL 2 BASIC3.68□□□□□ -1.82
C9orf72Q96LT7 AC055878.1-201ENST00000531858 281 ntTSL 3 BASIC3.68□□□□□ -1.82
C9orf72Q96LT7 AC073530.1-201ENST00000535917 775 ntTSL 5 BASIC3.68□□□□□ -1.82
C9orf72Q96LT7 LINC01965-204ENST00000545549 575 ntTSL 4 BASIC3.68□□□□□ -1.82
C9orf72Q96LT7 RAB3IP-214ENST00000550847 670 ntTSL 3 BASIC3.68□□□□□ -1.82
C9orf72Q96LT7 TGIF1P1-201ENST00000558095 802 ntBASIC3.68□□□□□ -1.82
C9orf72Q96LT7 MIR5187-201ENST00000583479 76 ntBASIC3.68□□□□□ -1.82
C9orf72Q96LT7 LINC01900-202ENST00000584898 603 ntTSL 5 BASIC3.68□□□□□ -1.82
C9orf72Q96LT7 BNIP3P22-201ENST00000593399 556 ntBASIC3.68□□□□□ -1.82
C9orf72Q96LT7 CT45A3-201ENST00000597510 1076 ntAPPRIS P1 TSL 1 (best) BASIC3.68□□□□□ -1.82
C9orf72Q96LT7 BNIP3P38-201ENST00000601117 544 ntBASIC3.68□□□□□ -1.82
C9orf72Q96LT7 AC011473.1-201ENST00000601280 443 ntTSL 2 BASIC3.68□□□□□ -1.82
C9orf72Q96LT7 AC006077.1-201ENST00000604746 343 ntBASIC3.68□□□□□ -1.82
C9orf72Q96LT7 CT45A2-201ENST00000605791 1076 ntAPPRIS P1 TSL 1 (best) BASIC3.68□□□□□ -1.82
C9orf72Q96LT7 CT45A5-202ENST00000617203 726 ntAPPRIS P1 TSL 1 (best) BASIC3.68□□□□□ -1.82
C9orf72Q96LT7 Xist_exon1.1-201ENST00000618930 85 ntBASIC3.68□□□□□ -1.82
C9orf72Q96LT7 AL357559.1-201ENST00000622228 274 ntBASIC3.68□□□□□ -1.82
C9orf72Q96LT7 AL732618.1-201ENST00000623251 301 ntBASIC3.68□□□□□ -1.82
C9orf72Q96LT7 AC068647.1-201ENST00000489539 2265 ntBASIC3.68□□□□□ -1.82
C9orf72Q96LT7 ZNF99-202ENST00000596209 7817 ntTSL 5 BASIC3.68□□□□□ -1.82
C9orf72Q96LT7 PHF11-215ENST00000488958 1318 ntAPPRIS ALT2 TSL 1 (best) BASIC3.68□□□□□ -1.82
C9orf72Q96LT7 PRRG1-202ENST00000449135 4481 ntAPPRIS P1 TSL 1 (best) BASIC3.68□□□□□ -1.82
C9orf72Q96LT7 TET2-204ENST00000413648 4973 ntTSL 1 (best) BASIC3.68□□□□□ -1.82
C9orf72Q96LT7 ZNF479-201ENST00000319636 1811 ntAPPRIS P1 TSL 1 (best) BASIC3.67□□□□□ -1.82
C9orf72Q96LT7 PRO1804-201ENST00000623780 2050 ntBASIC3.67□□□□□ -1.82
C9orf72Q96LT7 PTPN22-207ENST00000528414 3424 ntTSL 1 (best) BASIC3.67□□□□□ -1.82
C9orf72Q96LT7 GPRC6A-203ENST00000530250 2310 ntTSL 1 (best) BASIC3.67□□□□□ -1.82
C9orf72Q96LT7 CHM-205ENST00000615443 2821 ntTSL 1 (best) BASIC3.67□□□□□ -1.82
C9orf72Q96LT7 SNORA71.3-201ENST00000362582 128 ntBASIC3.67□□□□□ -1.82
C9orf72Q96LT7 AP002088.1-201ENST00000382740 395 ntBASIC3.67□□□□□ -1.82
C9orf72Q96LT7 SNORA5A-201ENST00000384111 134 ntBASIC3.67□□□□□ -1.82
C9orf72Q96LT7 TRAJ16-201ENST00000390521 60 ntAPPRIS P1 BASIC3.67□□□□□ -1.82
C9orf72Q96LT7 RPL7P60-201ENST00000397636 735 ntBASIC3.67□□□□□ -1.82
C9orf72Q96LT7 AC068295.1-201ENST00000413056 153 ntTSL 3 BASIC3.67□□□□□ -1.82
C9orf72Q96LT7 AC004987.3-201ENST00000413879 771 ntBASIC3.67□□□□□ -1.82
C9orf72Q96LT7 AC009237.5-201ENST00000414271 501 ntBASIC3.67□□□□□ -1.82
C9orf72Q96LT7 AC062031.1-201ENST00000414967 747 ntTSL 3 BASIC3.67□□□□□ -1.82
C9orf72Q96LT7 AL158834.2-201ENST00000415731 696 ntTSL 2 BASIC3.67□□□□□ -1.82
C9orf72Q96LT7 LINC00411-201ENST00000436722 461 ntTSL 3 BASIC3.67□□□□□ -1.82
C9orf72Q96LT7 AC105402.2-201ENST00000438503 358 ntBASIC3.67□□□□□ -1.82
C9orf72Q96LT7 AP000873.1-201ENST00000463987 400 ntBASIC3.67□□□□□ -1.82
C9orf72Q96LT7 RPL9P32-201ENST00000464118 620 ntBASIC3.67□□□□□ -1.82
C9orf72Q96LT7 AL365356.5-201ENST00000478294 697 ntTSL 2 BASIC3.67□□□□□ -1.82
C9orf72Q96LT7 HMGB1P21-201ENST00000502313 581 ntBASIC3.67□□□□□ -1.82
C9orf72Q96LT7 TRAV31-201ENST00000502780 342 ntBASIC3.67□□□□□ -1.82
C9orf72Q96LT7 SNX5P1-201ENST00000505757 1041 ntBASIC3.67□□□□□ -1.82
C9orf72Q96LT7 HMGN1P11-201ENST00000508668 303 ntBASIC3.67□□□□□ -1.82
C9orf72Q96LT7 ERAP2-205ENST00000510309 1275 ntTSL 1 (best) BASIC3.67□□□□□ -1.82
C9orf72Q96LT7 AC016550.2-202ENST00000511940 581 ntTSL 2 BASIC3.67□□□□□ -1.82
C9orf72Q96LT7 RFESD-208ENST00000513950 464 ntTSL 5 BASIC3.67□□□□□ -1.82
C9orf72Q96LT7 RN7SKP157-201ENST00000516174 282 ntBASIC3.67□□□□□ -1.82
C9orf72Q96LT7 RN7SKP60-201ENST00000516985 239 ntBASIC3.67□□□□□ -1.82
C9orf72Q96LT7 AC026403.1-201ENST00000518938 295 ntBASIC3.67□□□□□ -1.82
C9orf72Q96LT7 IGKV2-36-201ENST00000519999 223 ntBASIC3.67□□□□□ -1.82
C9orf72Q96LT7 AL139174.1-201ENST00000531489 886 ntBASIC3.67□□□□□ -1.82
C9orf72Q96LT7 AP002812.4-201ENST00000532139 286 ntBASIC3.67□□□□□ -1.82
C9orf72Q96LT7 DEFB109F-202ENST00000542600 509 ntTSL 2 BASIC3.67□□□□□ -1.82
C9orf72Q96LT7 AC005695.2-201ENST00000579641 259 ntTSL 3 BASIC3.67□□□□□ -1.82
C9orf72Q96LT7 LINC01930-201ENST00000602672 870 ntTSL 5 BASIC3.67□□□□□ -1.82
C9orf72Q96LT7 RPS4Y2-201ENST00000629237 792 ntAPPRIS P1 TSL 1 (best) BASIC3.67□□□□□ -1.82
C9orf72Q96LT7 TATDN1-221ENST00000630259 915 ntTSL 5 BASIC3.67□□□□□ -1.82
C9orf72Q96LT7 C2orf73-202ENST00000398634 1921 ntAPPRIS P1 TSL 1 (best) BASIC3.67□□□□□ -1.82
C9orf72Q96LT7 USP9Y-201ENST00000338981 10036 ntAPPRIS P1 TSL 1 (best) BASIC3.67□□□□□ -1.82
C9orf72Q96LT7 CEP44-201ENST00000296519 4173 ntAPPRIS P1 TSL 1 (best) BASIC3.67□□□□□ -1.82
C9orf72Q96LT7 CACNB4-260ENST00000637762 3800 ntTSL 5 BASIC3.67□□□□□ -1.82
C9orf72Q96LT7 CEP170-202ENST00000366542 6828 ntAPPRIS P1 TSL 5 BASIC3.66□□□□□ -1.82
C9orf72Q96LT7 ZNF804B-202ENST00000611114 3968 ntTSL 5 BASIC3.66□□□□□ -1.82
C9orf72Q96LT7 GPRC6A-202ENST00000368549 2622 ntTSL 1 (best) BASIC3.66□□□□□ -1.82
Retrieved 100 of 98,524 protein–RNA pairs in 98 ms