Protein–RNA interactions for Protein: Q96JG6

VPS50, Syndetin, humanhuman

Predictions only

Length 964 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50Q96JG6 MEMO1P5-201ENST00000604810 406 ntBASIC4.7□□□□□ -1.66
VPS50Q96JG6 AC064872.1-201ENST00000604823 1072 ntBASIC4.7□□□□□ -1.66
VPS50Q96JG6 HULC.1-201ENST00000612720 240 ntBASIC4.7□□□□□ -1.66
VPS50Q96JG6 AL158063.1-201ENST00000615349 536 ntBASIC4.7□□□□□ -1.66
VPS50Q96JG6 AC234782.5-201ENST00000617723 324 ntBASIC4.7□□□□□ -1.66
VPS50Q96JG6 CNBD1-207ENST00000620844 876 ntAPPRIS ALT2 TSL 5 BASIC4.7□□□□□ -1.66
VPS50Q96JG6 AL023881.1-201ENST00000621088 301 ntBASIC4.7□□□□□ -1.66
VPS50Q96JG6 OR8K3-202ENST00000623845 939 ntAPPRIS P1 BASIC4.7□□□□□ -1.66
VPS50Q96JG6 AL358154.1-201ENST00000627075 444 ntTSL 3 BASIC4.7□□□□□ -1.66
VPS50Q96JG6 RNF123-214ENST00000629802 207 ntTSL 5 BASIC4.7□□□□□ -1.66
VPS50Q96JG6 NKIRAS1-209ENST00000614374 1612 ntAPPRIS P2 TSL 1 (best) BASIC4.7□□□□□ -1.66
VPS50Q96JG6 AC092162.3-201ENST00000624511 1624 ntBASIC4.7□□□□□ -1.66
VPS50Q96JG6 CCDC121-201ENST00000324364 2342 ntAPPRIS P3 TSL 1 (best) BASIC4.7□□□□□ -1.66
VPS50Q96JG6 CLVS1-205ENST00000519846 3622 ntAPPRIS P1 TSL 5 BASIC4.7□□□□□ -1.66
VPS50Q96JG6 TXNDC8-201ENST00000374507 1787 ntTSL 1 (best) BASIC4.7□□□□□ -1.66
VPS50Q96JG6 ALB-219ENST00000621085 1418 ntTSL 5 BASIC4.7□□□□□ -1.66
VPS50Q96JG6 TAS2R30-201ENST00000539585 1687 ntAPPRIS P1 BASIC4.7□□□□□ -1.66
VPS50Q96JG6 PCDH15-203ENST00000373955 4230 ntTSL 1 (best) BASIC4.7□□□□□ -1.66
VPS50Q96JG6 SAMSN1-201ENST00000285670 2185 ntTSL 1 (best) BASIC4.7□□□□□ -1.66
VPS50Q96JG6 AL445487.1-201ENST00000415694 1580 ntBASIC4.7□□□□□ -1.66
VPS50Q96JG6 SOBP-204ENST00000618129 1550 ntTSL 1 (best) BASIC4.7□□□□□ -1.66
VPS50Q96JG6 IL1RL1-201ENST00000233954 2058 ntAPPRIS P1 TSL 1 (best) BASIC4.69□□□□□ -1.66
VPS50Q96JG6 DICER1-212ENST00000541352 5621 ntTSL 1 (best) BASIC4.69□□□□□ -1.66
VPS50Q96JG6 KCNU1-201ENST00000399881 3695 ntAPPRIS P1 TSL 2 BASIC4.69□□□□□ -1.66
VPS50Q96JG6 NCLP2-201ENST00000416078 1462 ntBASIC4.69□□□□□ -1.66
VPS50Q96JG6 NUP205-201ENST00000285968 6266 ntAPPRIS P1 TSL 1 (best) BASIC4.69□□□□□ -1.66
VPS50Q96JG6 LINC01289-201ENST00000519550 3712 ntTSL 1 (best) BASIC4.69□□□□□ -1.66
VPS50Q96JG6 AC087190.4-201ENST00000574616 8334 ntBASIC4.69□□□□□ -1.66
VPS50Q96JG6 LRRC77P-206ENST00000481578 2350 ntTSL 1 (best) BASIC4.69□□□□□ -1.66
VPS50Q96JG6 ZNF700-202ENST00000482090 3113 ntAPPRIS ALT2 TSL 2 BASIC4.69□□□□□ -1.66
VPS50Q96JG6 DDX43P2-201ENST00000604753 1354 ntBASIC4.69□□□□□ -1.66
VPS50Q96JG6 HERC4-204ENST00000395198 4445 ntAPPRIS ALT1 TSL 1 (best) BASIC4.69□□□□□ -1.66
VPS50Q96JG6 EFCAB3-201ENST00000305286 1542 ntAPPRIS P1 TSL 1 (best) BASIC4.69□□□□□ -1.66
VPS50Q96JG6 GHR-213ENST00000622294 4312 ntTSL 5 BASIC4.69□□□□□ -1.66
VPS50Q96JG6 GNAS-202ENST00000306090 477 ntTSL 5 BASIC4.69□□□□□ -1.66
VPS50Q96JG6 RNU6-500P-201ENST00000362349 107 ntBASIC4.69□□□□□ -1.66
VPS50Q96JG6 RN7SKP115-201ENST00000363177 317 ntBASIC4.69□□□□□ -1.66
VPS50Q96JG6 RAET1L-202ENST00000367341 1285 ntAPPRIS P1 TSL 1 (best) BASIC4.69□□□□□ -1.66
VPS50Q96JG6 SNAPC3-201ENST00000380799 753 ntTSL 3 BASIC4.69□□□□□ -1.66
VPS50Q96JG6 RNA5SP87-201ENST00000384155 118 ntBASIC4.69□□□□□ -1.66
VPS50Q96JG6 RPL23AP29-201ENST00000397284 453 ntBASIC4.69□□□□□ -1.66
VPS50Q96JG6 CYCSP45-201ENST00000402289 315 ntBASIC4.69□□□□□ -1.66
VPS50Q96JG6 PRRC2CP1-201ENST00000404428 159 ntBASIC4.69□□□□□ -1.66
VPS50Q96JG6 RPL7P8-201ENST00000411964 730 ntBASIC4.69□□□□□ -1.66
VPS50Q96JG6 AC008154.2-201ENST00000420268 414 ntTSL 3 BASIC4.69□□□□□ -1.66
VPS50Q96JG6 MYCBP2-AS2-201ENST00000428716 428 ntTSL 5 BASIC4.69□□□□□ -1.66
VPS50Q96JG6 AL049745.1-201ENST00000433953 286 ntBASIC4.69□□□□□ -1.66
VPS50Q96JG6 AL592182.1-201ENST00000440897 250 ntTSL 5 BASIC4.69□□□□□ -1.66
VPS50Q96JG6 AP001434.1-201ENST00000444977 287 ntTSL 3 BASIC4.69□□□□□ -1.66
VPS50Q96JG6 OR1H1P-201ENST00000448731 937 ntBASIC4.69□□□□□ -1.66
VPS50Q96JG6 MTND2P19-201ENST00000449129 1012 ntBASIC4.69□□□□□ -1.66
VPS50Q96JG6 IMMP2L-205ENST00000450877 761 ntTSL 2 BASIC4.69□□□□□ -1.66
VPS50Q96JG6 AC016751.2-201ENST00000453206 280 ntTSL 5 BASIC4.69□□□□□ -1.66
VPS50Q96JG6 AL691482.1-201ENST00000453255 87 ntBASIC4.69□□□□□ -1.66
VPS50Q96JG6 AC096543.1-201ENST00000455038 823 ntTSL 3 BASIC4.69□□□□□ -1.66
VPS50Q96JG6 AL157373.1-201ENST00000456036 276 ntTSL 3 BASIC4.69□□□□□ -1.66
VPS50Q96JG6 RPL21P71-201ENST00000465598 459 ntBASIC4.69□□□□□ -1.66
VPS50Q96JG6 RPL7P1-201ENST00000468161 747 ntBASIC4.69□□□□□ -1.66
VPS50Q96JG6 RPL7P9-201ENST00000468715 747 ntBASIC4.69□□□□□ -1.66
VPS50Q96JG6 AC006511.1-201ENST00000470614 315 ntBASIC4.69□□□□□ -1.66
VPS50Q96JG6 ALDH7A1P3-201ENST00000492517 345 ntBASIC4.69□□□□□ -1.66
VPS50Q96JG6 AL136537.1-202ENST00000501725 430 ntTSL 3 BASIC4.69□□□□□ -1.66
VPS50Q96JG6 THAP6-205ENST00000504190 1004 ntTSL 1 (best) BASIC4.69□□□□□ -1.66
VPS50Q96JG6 HMGB1P28-201ENST00000507778 552 ntBASIC4.69□□□□□ -1.66
VPS50Q96JG6 LINC02113-201ENST00000510302 336 ntTSL 3 BASIC4.69□□□□□ -1.66
VPS50Q96JG6 AC060788.1-201ENST00000521318 469 ntBASIC4.69□□□□□ -1.66
VPS50Q96JG6 AC091163.1-201ENST00000524012 605 ntTSL 4 BASIC4.69□□□□□ -1.66
VPS50Q96JG6 AC091564.3-201ENST00000527398 429 ntTSL 3 BASIC4.69□□□□□ -1.66
VPS50Q96JG6 AC092851.1-201ENST00000535964 478 ntBASIC4.69□□□□□ -1.66
VPS50Q96JG6 AC090049.1-201ENST00000551075 1011 ntTSL 3 BASIC4.69□□□□□ -1.66
VPS50Q96JG6 LINC02386-201ENST00000551202 509 ntTSL 3 BASIC4.69□□□□□ -1.66
VPS50Q96JG6 LINC02313-201ENST00000553330 550 ntTSL 2 BASIC4.69□□□□□ -1.66
VPS50Q96JG6 AC092378.2-202ENST00000569328 445 ntTSL 3 BASIC4.69□□□□□ -1.66
VPS50Q96JG6 MIR3667-201ENST00000581025 74 ntBASIC4.69□□□□□ -1.66
VPS50Q96JG6 ZNF230-204ENST00000585632 579 ntTSL 2 BASIC4.69□□□□□ -1.66
VPS50Q96JG6 AC068790.2-201ENST00000602601 557 ntBASIC4.69□□□□□ -1.66
VPS50Q96JG6 RN7SKP299-201ENST00000606679 301 ntBASIC4.69□□□□□ -1.66
VPS50Q96JG6 AC103591.3-201ENST00000608684 209 ntBASIC4.69□□□□□ -1.66
VPS50Q96JG6 AL627230.1-201ENST00000613077 211 ntBASIC4.69□□□□□ -1.66
VPS50Q96JG6 AL591926.8-201ENST00000616876 211 ntBASIC4.69□□□□□ -1.66
VPS50Q96JG6 AC140113.4-201ENST00000622087 222 ntBASIC4.69□□□□□ -1.66
VPS50Q96JG6 AC091953.3-201ENST00000623220 236 ntBASIC4.69□□□□□ -1.66
VPS50Q96JG6 AC098679.5-201ENST00000624394 571 ntBASIC4.69□□□□□ -1.66
VPS50Q96JG6 AC120349.2-201ENST00000625002 298 ntBASIC4.69□□□□□ -1.66
VPS50Q96JG6 ADGRL2-208ENST00000370725 5293 ntAPPRIS ALT2 TSL 5 BASIC4.69□□□□□ -1.66
VPS50Q96JG6 RIMS2-201ENST00000262231 3854 ntTSL 1 (best) BASIC4.69□□□□□ -1.66
VPS50Q96JG6 SLC16A7-201ENST00000261187 11777 ntAPPRIS P1 TSL 1 (best) BASIC4.69□□□□□ -1.66
VPS50Q96JG6 AC092104.1-201ENST00000497346 1441 ntBASIC4.69□□□□□ -1.66
VPS50Q96JG6 MEI4-201ENST00000602452 4800 ntAPPRIS P1 TSL 5 BASIC4.69□□□□□ -1.66
VPS50Q96JG6 TMEM255A-202ENST00000371352 2879 ntTSL 2 BASIC4.69□□□□□ -1.66
VPS50Q96JG6 CSRNP3-202ENST00000342316 11684 ntAPPRIS P1 TSL 1 (best) BASIC4.69□□□□□ -1.66
VPS50Q96JG6 AC017104.4-201ENST00000636283 1592 ntBASIC4.69□□□□□ -1.66
VPS50Q96JG6 AC104662.3-202ENST00000507794 4055 ntTSL 2 BASIC4.69□□□□□ -1.66
VPS50Q96JG6 AC099654.2-201ENST00000433031 1980 ntBASIC4.69□□□□□ -1.66
VPS50Q96JG6 ARHGAP42-201ENST00000298815 4752 ntAPPRIS P1 TSL 5 BASIC4.69□□□□□ -1.66
VPS50Q96JG6 DBF4P1-201ENST00000412976 1892 ntBASIC4.69□□□□□ -1.66
VPS50Q96JG6 CDR1-202ENST00000625883 1485 ntBASIC4.69□□□□□ -1.66
VPS50Q96JG6 RAP1GDS1-205ENST00000408927 3681 ntAPPRIS P3 TSL 2 BASIC4.68□□□□□ -1.66
VPS50Q96JG6 CYLD-212ENST00000568704 3292 ntTSL 5 BASIC4.68□□□□□ -1.66
VPS50Q96JG6 CLCA3P-202ENST00000466454 3412 ntTSL 1 (best) BASIC4.68□□□□□ -1.66
Retrieved 100 of 98,524 protein–RNA pairs in 140.2 ms