Protein–RNA interactions for Protein: P98160

HSPG2, Basement membrane-specific heparan sulfate proteoglycan core protein, humanhuman

Predictions only

Length 4,391 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HSPG2P98160 MRPL42-206ENST00000549982 15582 ntAPPRIS P2 TSL 1 (best) BASIC1.94□□□□□ -2.1
HSPG2P98160 SYNE2-203ENST00000357395 21555 ntTSL 5 BASIC1.94□□□□□ -2.1
HSPG2P98160 NR3C1-206ENST00000424646 4591 ntTSL 1 (best) BASIC1.94□□□□□ -2.1
HSPG2P98160 FP236241.1-201ENST00000623374 7632 ntTSL 1 (best) BASIC1.94□□□□□ -2.1
HSPG2P98160 CU633967.1-211ENST00000624444 7628 ntTSL 1 (best) BASIC1.94□□□□□ -2.1
HSPG2P98160 EPGN-201ENST00000332112 847 ntTSL 1 (best) BASIC1.94□□□□□ -2.1
HSPG2P98160 TUBD1-204ENST00000376094 1154 ntTSL 1 (best) BASIC1.94□□□□□ -2.1
HSPG2P98160 AL590385.1-201ENST00000419446 462 ntTSL 3 BASIC1.94□□□□□ -2.1
HSPG2P98160 LINC00411-201ENST00000436722 461 ntTSL 3 BASIC1.94□□□□□ -2.1
HSPG2P98160 LINC01350-201ENST00000436955 642 ntTSL 3 BASIC1.94□□□□□ -2.1
HSPG2P98160 LINC02375-201ENST00000545739 852 ntTSL 1 (best) BASIC1.94□□□□□ -2.1
HSPG2P98160 CYP2C60P-201ENST00000566088 139 ntBASIC1.94□□□□□ -2.1
HSPG2P98160 AC138761.3-201ENST00000579993 334 ntBASIC1.94□□□□□ -2.1
HSPG2P98160 AC098826.3-201ENST00000603823 466 ntBASIC1.94□□□□□ -2.1
HSPG2P98160 AC103710.3-201ENST00000608157 948 ntBASIC1.94□□□□□ -2.1
HSPG2P98160 AC009303.2-205ENST00000627670 1091 ntTSL 5 BASIC1.94□□□□□ -2.1
HSPG2P98160 LINC01847-201ENST00000522627 5607 ntTSL 1 (best) BASIC1.93□□□□□ -2.1
HSPG2P98160 ZSCAN4-202ENST00000612521 1979 ntAPPRIS P1 TSL 5 BASIC1.93□□□□□ -2.1
HSPG2P98160 HSPA4L-202ENST00000505726 2639 ntTSL 2 BASIC1.93□□□□□ -2.1
HSPG2P98160 PCDH15-206ENST00000373965 9237 ntAPPRIS ALT2 TSL 5 BASIC1.93□□□□□ -2.1
HSPG2P98160 CYSLTR2-201ENST00000282018 4672 ntAPPRIS P1 BASIC1.93□□□□□ -2.1
HSPG2P98160 ZNF532-201ENST00000336078 6696 ntAPPRIS P1 TSL 1 (best) BASIC1.93□□□□□ -2.1
HSPG2P98160 RN7SKP56-201ENST00000410513 331 ntBASIC1.93□□□□□ -2.1
HSPG2P98160 HNRNPDLP1-201ENST00000412834 550 ntBASIC1.93□□□□□ -2.1
HSPG2P98160 AL024509.3-201ENST00000413898 745 ntTSL 1 (best) BASIC1.93□□□□□ -2.1
HSPG2P98160 AC002075.2-201ENST00000425207 252 ntBASIC1.93□□□□□ -2.1
HSPG2P98160 RALGAPA1P1-201ENST00000443361 6232 ntBASIC1.93□□□□□ -2.1
HSPG2P98160 TMEM232-201ENST00000455884 2501 ntAPPRIS P2 TSL 2 BASIC1.93□□□□□ -2.1
HSPG2P98160 AC099560.2-201ENST00000457554 255 ntBASIC1.93□□□□□ -2.1
HSPG2P98160 RNA5SP445-201ENST00000515889 115 ntBASIC1.93□□□□□ -2.1
HSPG2P98160 IGKV2-36-201ENST00000519999 223 ntBASIC1.93□□□□□ -2.1
HSPG2P98160 C6orf10-205ENST00000527965 2076 ntAPPRIS ALT2 TSL 2 BASIC1.93□□□□□ -2.1
HSPG2P98160 AC233702.9-201ENST00000581528 203 ntBASIC1.93□□□□□ -2.1
HSPG2P98160 AL359535.1-201ENST00000612100 1087 ntBASIC1.93□□□□□ -2.1
HSPG2P98160 uc_338.25-201ENST00000613756 156 ntBASIC1.93□□□□□ -2.1
HSPG2P98160 AC110079.2-201ENST00000629462 1512 ntTSL 1 (best) BASIC1.93□□□□□ -2.1
HSPG2P98160 SCN3A-203ENST00000409101 6599 ntAPPRIS ALT1 TSL 1 (best) BASIC1.93□□□□□ -2.1
HSPG2P98160 VPS13D-213ENST00000613099 16245 ntAPPRIS ALT1 TSL 1 (best) BASIC1.93□□□□□ -2.1
HSPG2P98160 CCDC82-201ENST00000278520 2941 ntAPPRIS P2 TSL 5 BASIC1.93□□□□□ -2.1
HSPG2P98160 AC011124.2-201ENST00000518739 3222 ntTSL 1 (best) BASIC1.93□□□□□ -2.1
HSPG2P98160 OR7A5-201ENST00000322301 4216 ntAPPRIS P1 BASIC1.93□□□□□ -2.1
HSPG2P98160 SERPINA7-201ENST00000327674 2642 ntAPPRIS P1 TSL 1 (best) BASIC1.93□□□□□ -2.1
HSPG2P98160 MAP4K3-205ENST00000437545 3924 ntTSL 5 BASIC1.93□□□□□ -2.1
HSPG2P98160 TNFRSF17-202ENST00000396495 668 ntAPPRIS ALT2 TSL 1 (best) BASIC1.93□□□□□ -2.1
HSPG2P98160 HMGB3P22-202ENST00000451823 572 ntBASIC1.93□□□□□ -2.1
HSPG2P98160 RPL23AP67-201ENST00000465341 474 ntBASIC1.93□□□□□ -2.1
HSPG2P98160 LINC00632-202ENST00000498732 746 ntTSL 3 BASIC1.93□□□□□ -2.1
HSPG2P98160 SNHG1-219ENST00000542112 780 ntTSL 3 BASIC1.93□□□□□ -2.1
HSPG2P98160 AC023394.1-201ENST00000578673 312 ntTSL 5 BASIC1.93□□□□□ -2.1
HSPG2P98160 AC015849.3-201ENST00000603981 488 ntTSL 5 BASIC1.93□□□□□ -2.1
HSPG2P98160 C12orf45-204ENST00000552951 23529 ntAPPRIS P1 TSL 1 (best) BASIC1.93□□□□□ -2.1
HSPG2P98160 ANKRD36BP1-201ENST00000358576 1779 ntBASIC1.93□□□□□ -2.1
HSPG2P98160 FIGNL1-202ENST00000395556 3485 ntAPPRIS P1 TSL 2 BASIC1.93□□□□□ -2.1
HSPG2P98160 KIAA1841-202ENST00000356719 2149 ntTSL 5 BASIC1.93□□□□□ -2.1
HSPG2P98160 KTN1-205ENST00000395314 4618 ntAPPRIS P4 TSL 1 (best) BASIC1.93□□□□□ -2.1
HSPG2P98160 MIR1287-201ENST00000408492 90 ntBASIC1.93□□□□□ -2.1
HSPG2P98160 NAP1L1P2-201ENST00000414182 1089 ntBASIC1.93□□□□□ -2.1
HSPG2P98160 AP000146.1-203ENST00000444178 309 ntTSL 3 BASIC1.93□□□□□ -2.1
HSPG2P98160 ELOCP23-201ENST00000452014 332 ntBASIC1.93□□□□□ -2.1
HSPG2P98160 LINC01753-201ENST00000458145 631 ntTSL 3 BASIC1.93□□□□□ -2.1
HSPG2P98160 MTND4P2-201ENST00000507767 1203 ntBASIC1.93□□□□□ -2.1
HSPG2P98160 AC022367.1-202ENST00000535066 537 ntTSL 3 BASIC1.93□□□□□ -2.1
HSPG2P98160 AC010185.1-201ENST00000542489 456 ntTSL 3 BASIC1.93□□□□□ -2.1
HSPG2P98160 ZNF84-212ENST00000542874 540 ntTSL 5 BASIC1.93□□□□□ -2.1
HSPG2P98160 AP001180.2-201ENST00000579413 422 ntTSL 5 BASIC1.93□□□□□ -2.1
HSPG2P98160 AP005264.4-201ENST00000592203 422 ntTSL 5 BASIC1.93□□□□□ -2.1
HSPG2P98160 WFDC11-203ENST00000618797 561 ntAPPRIS P1 TSL 5 BASIC1.93□□□□□ -2.1
HSPG2P98160 AL512643.1-201ENST00000635735 524 ntBASIC1.93□□□□□ -2.1
HSPG2P98160 MAP3K19-203ENST00000375845 4369 ntAPPRIS P3 TSL 1 (best) BASIC1.93□□□□□ -2.1
HSPG2P98160 DLD-204ENST00000437604 1859 ntTSL 2 BASIC1.93□□□□□ -2.1
HSPG2P98160 CSMD1-215ENST00000537824 13512 ntAPPRIS ALT2 TSL 5 BASIC1.93□□□□□ -2.1
HSPG2P98160 AL078595.2-201ENST00000605309 1780 ntBASIC1.93□□□□□ -2.1
HSPG2P98160 ADNP-201ENST00000349014 5963 ntAPPRIS P1 TSL 1 (best) BASIC1.93□□□□□ -2.1
HSPG2P98160 LINC02030-201ENST00000492683 1602 ntTSL 5 BASIC1.93□□□□□ -2.1
HSPG2P98160 CKAP5-202ENST00000354558 6428 ntTSL 1 (best) BASIC1.93□□□□□ -2.1
HSPG2P98160 YWHAZ-201ENST00000353245 2829 ntAPPRIS P1 TSL 1 (best) BASIC1.92□□□□□ -2.1
HSPG2P98160 ZNF334-205ENST00000615481 3706 ntAPPRIS ALT2 TSL 5 BASIC1.92□□□□□ -2.1
HSPG2P98160 AL513302.2-201ENST00000562313 1842 ntBASIC1.92□□□□□ -2.1
HSPG2P98160 PTPN22-211ENST00000538253 3575 ntTSL 1 (best) BASIC1.92□□□□□ -2.1
HSPG2P98160 ZNF322-205ENST00000471278 2675 ntAPPRIS P1 TSL 5 BASIC1.92□□□□□ -2.1
HSPG2P98160 BCL2A1-201ENST00000267953 1033 ntAPPRIS P1 TSL 1 (best) BASIC1.92□□□□□ -2.1
HSPG2P98160 SNORD74.4-201ENST00000364129 80 ntBASIC1.92□□□□□ -2.1
HSPG2P98160 GNG5P5-201ENST00000420444 220 ntBASIC1.92□□□□□ -2.1
HSPG2P98160 AC092809.1-201ENST00000441469 474 ntBASIC1.92□□□□□ -2.1
HSPG2P98160 LINC01034-201ENST00000448806 277 ntTSL 3 BASIC1.92□□□□□ -2.1
HSPG2P98160 HMGN2P23-201ENST00000456759 269 ntBASIC1.92□□□□□ -2.1
HSPG2P98160 AC114781.4-201ENST00000513707 639 ntBASIC1.92□□□□□ -2.1
HSPG2P98160 FTH1P11-201ENST00000517577 551 ntBASIC1.92□□□□□ -2.1
HSPG2P98160 AC090607.4-201ENST00000558192 369 ntTSL 3 BASIC1.92□□□□□ -2.1
HSPG2P98160 AC022149.2-201ENST00000621061 203 ntBASIC1.92□□□□□ -2.1
HSPG2P98160 PCDH18-201ENST00000344876 5906 ntAPPRIS P3 TSL 1 (best) BASIC1.92□□□□□ -2.1
HSPG2P98160 RAB3C-201ENST00000282878 8896 ntAPPRIS P1 TSL 1 (best) BASIC1.92□□□□□ -2.1
HSPG2P98160 ABCB11-201ENST00000263817 4775 ntAPPRIS P1 TSL 1 (best) BASIC1.92□□□□□ -2.1
HSPG2P98160 ZNF260-205ENST00000593142 4047 ntAPPRIS P1 TSL 1 (best) BASIC1.92□□□□□ -2.1
HSPG2P98160 SLC38A9-218ENST00000512595 1756 ntTSL 2 BASIC1.92□□□□□ -2.1
HSPG2P98160 AC011266.1-201ENST00000624119 3569 ntBASIC1.92□□□□□ -2.1
HSPG2P98160 SYF2-202ENST00000354361 926 ntTSL 2 BASIC1.92□□□□□ -2.1
HSPG2P98160 RPL23AP82-202ENST00000427528 469 ntBASIC1.92□□□□□ -2.1
HSPG2P98160 UBE2V2P4-201ENST00000447495 259 ntBASIC1.92□□□□□ -2.1
HSPG2P98160 EEF1B2P7-201ENST00000451177 676 ntBASIC1.92□□□□□ -2.1
Retrieved 100 of 98,524 protein–RNA pairs in 110.7 ms